RNA–Protein interactions for RNA: ENST00000486812.5

PRDM15-212, Transcript of PR/SET domain 15, humanhuman

TSL 1 (best)

Gene PRDM15, Length 7,072 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM15-212ENST00000486812 PDE6AP16499 860 aa11.22□□□□□ -0.61
PRDM15-212ENST00000486812 GPTP24298 496 aa11.22□□□□□ -0.61
PRDM15-212ENST00000486812 RASSF7Q02833 373 aa11.22□□□□□ -0.61
PRDM15-212ENST00000486812 ZNF174Q15697 407 aa11.22□□□□□ -0.61
PRDM15-212ENST00000486812 TMEM259Q4ZIN3 620 aa11.22□□□□□ -0.61
PRDM15-212ENST00000486812 TRIM74Q86UV6 250 aa11.22□□□□□ -0.61
PRDM15-212ENST00000486812 TRIM73Q86UV7 250 aa11.22□□□□□ -0.61
PRDM15-212ENST00000486812 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.22□□□□□ -0.61
PRDM15-212ENST00000486812 GORASP1Q9BQQ3 440 aa11.22□□□□□ -0.61
PRDM15-212ENST00000486812 ZMYND8Q9ULU4 1186 aaPredicted RBP11.22□□□□□ -0.61
PRDM15-212ENST00000486812 ERCC6Q03468 1493 aa11.22□□□□□ -0.61
PRDM15-212ENST00000486812 TMED8Q6PL24 325 aaPredicted RBP11.21□□□□□ -0.61
PRDM15-212ENST00000486812 C6orf50Q9HD87 102 aa11.21□□□□□ -0.61
PRDM15-212ENST00000486812 UBTFL6P0CB48 400 aaPredicted RBP11.21□□□□□ -0.61
PRDM15-212ENST00000486812 HSPA8P11142 646 aaKnown RBP11.21□□□□□ -0.61
PRDM15-212ENST00000486812 SLCO1A2P46721 670 aa11.21□□□□□ -0.61
PRDM15-212ENST00000486812 DAPK1P53355 1430 aa11.21□□□□□ -0.61
PRDM15-212ENST00000486812 TOGARAM2Q6ZUX3 1019 aa11.21□□□□□ -0.61
PRDM15-212ENST00000486812 U2AF1L4Q8WU68 220 aaKnown RBP11.21□□□□□ -0.61
PRDM15-212ENST00000486812 EPC1Q9H2F5 836 aa11.21□□□□□ -0.61
PRDM15-212ENST00000486812 RAD21L1Q9H4I0 556 aa11.21□□□□□ -0.61
PRDM15-212ENST00000486812 INHBAP08476 426 aa11.21□□□□□ -0.61
PRDM15-212ENST00000486812 BCRP11274 1271 aa11.21□□□□□ -0.61
PRDM15-212ENST00000486812 KRT81Q14533 505 aa11.21□□□□□ -0.61
PRDM15-212ENST00000486812 NAA35Q5VZE5 725 aa11.21□□□□□ -0.61
PRDM15-212ENST00000486812 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.21□□□□□ -0.61
PRDM15-212ENST00000486812 HMGXB3Q12766 1538 aa11.21□□□□□ -0.61
PRDM15-212ENST00000486812 SPDYE3A6NKU9 549 aa11.21□□□□□ -0.62
PRDM15-212ENST00000486812 TULP2O00295 520 aa11.21□□□□□ -0.62
PRDM15-212ENST00000486812 P4HA2O15460 535 aa11.21□□□□□ -0.62
PRDM15-212ENST00000486812 LCA5LO95447 670 aa11.21□□□□□ -0.62
PRDM15-212ENST00000486812 SYCE1LA8MT33 242 aa11.21□□□□□ -0.62
PRDM15-212ENST00000486812 LSM1O15116 133 aaKnown RBP11.21□□□□□ -0.62
PRDM15-212ENST00000486812 GSTA1P08263 222 aa11.21□□□□□ -0.62
PRDM15-212ENST00000486812 SERPINB8P50452 374 aa11.21□□□□□ -0.62
PRDM15-212ENST00000486812 KRR1Q13601 381 aaKnown RBP11.21□□□□□ -0.62
PRDM15-212ENST00000486812 CENPUQ71F23 418 aa11.21□□□□□ -0.62
PRDM15-212ENST00000486812 CROCCP3Q8IVE0 287 aa11.21□□□□□ -0.62
PRDM15-212ENST00000486812 PHKBQ93100 1093 aa11.21□□□□□ -0.62
PRDM15-212ENST00000486812 TAF1DQ9H5J8 278 aaPredicted RBP11.21□□□□□ -0.62
PRDM15-212ENST00000486812 EFCAB5A4FU69 1503 aa11.21□□□□□ -0.62
PRDM15-212ENST00000486812 ATP6V1G2O95670 118 aa11.21□□□□□ -0.62
PRDM15-212ENST00000486812 VIL1P09327 827 aaKnown RBP11.21□□□□□ -0.62
PRDM15-212ENST00000486812 TGS1Q96RS0 853 aaKnown RBP11.21□□□□□ -0.62
PRDM15-212ENST00000486812 SLC5A1P13866 664 aa11.2□□□□□ -0.62
PRDM15-212ENST00000486812 KIF23Q02241 960 aaPredicted RBP11.2□□□□□ -0.62
PRDM15-212ENST00000486812 CNGA3Q16281 694 aa11.2□□□□□ -0.62
PRDM15-212ENST00000486812 KBTBD12Q3ZCT8 623 aa11.2□□□□□ -0.62
PRDM15-212ENST00000486812 C10orf76Q5T2E6 689 aa11.2□□□□□ -0.62
PRDM15-212ENST00000486812 ZNF530Q6P9A1 599 aaPredicted RBP11.2□□□□□ -0.62
PRDM15-212ENST00000486812 TERB1Q8NA31 727 aa11.2□□□□□ -0.62
PRDM15-212ENST00000486812 CNBD2Q96M20 576 aa11.2□□□□□ -0.62
PRDM15-212ENST00000486812 MYD88Q99836 296 aa11.2□□□□□ -0.62
PRDM15-212ENST00000486812 NT5C3AQ9H0P0 336 aa11.2□□□□□ -0.62
PRDM15-212ENST00000486812 PTPN23Q9H3S7 1636 aa11.2□□□□□ -0.62
PRDM15-212ENST00000486812 H2AFZP0C0S5 128 aa11.2□□□□□ -0.62
PRDM15-212ENST00000486812 ADARP55265 1226 aaKnown RBP11.2□□□□□ -0.62
PRDM15-212ENST00000486812 KCNB1Q14721 858 aa11.2□□□□□ -0.62
PRDM15-212ENST00000486812 PTGISQ16647 500 aa11.2□□□□□ -0.62
PRDM15-212ENST00000486812 H2AFVQ71UI9 128 aa11.2□□□□□ -0.62
PRDM15-212ENST00000486812 CALML6Q8TD86 181 aa11.2□□□□□ -0.62
PRDM15-212ENST00000486812 MAML1Q92585 1016 aa11.2□□□□□ -0.62
PRDM15-212ENST00000486812 RTEL1Q9NZ71 1219 aa11.2□□□□□ -0.62
PRDM15-212ENST00000486812 STMN3Q9NZ72 180 aa11.2□□□□□ -0.62
PRDM15-212ENST00000486812 USP15Q9Y4E8 981 aaPredicted RBP11.2□□□□□ -0.62
PRDM15-212ENST00000486812 HNRNPCL2B2RXH8 293 aa11.2□□□□□ -0.62
PRDM15-212ENST00000486812 GNGT2O14610 69 aa11.2□□□□□ -0.62
PRDM15-212ENST00000486812 JAK2O60674 1132 aa11.2□□□□□ -0.62
PRDM15-212ENST00000486812 IGHMBP2P38935 993 aaKnown RBP11.2□□□□□ -0.62
PRDM15-212ENST00000486812 CCDC144BQ3MJ40 725 aa11.2□□□□□ -0.62
PRDM15-212ENST00000486812 CHAMP1Q96JM3 812 aa11.2□□□□□ -0.62
PRDM15-212ENST00000486812 ING2Q9H160 280 aa11.2□□□□□ -0.62
PRDM15-212ENST00000486812 DBF4Q9UBU7 674 aaPredicted RBP11.2□□□□□ -0.62
PRDM15-212ENST00000486812 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.2□□□□□ -0.62
PRDM15-212ENST00000486812 MOCS3O95396 460 aa11.2□□□□□ -0.62
PRDM15-212ENST00000486812 SIX5Q8N196 739 aa11.2□□□□□ -0.62
PRDM15-212ENST00000486812 ZKSCAN4Q969J2 545 aaPredicted RBP11.2□□□□□ -0.62
PRDM15-212ENST00000486812 NLRC4Q9NPP4 1024 aa11.2□□□□□ -0.62
PRDM15-212ENST00000486812 CCPG1Q9ULG6 757 aa11.2□□□□□ -0.62
PRDM15-212ENST00000486812 IQSEC3Q9UPP2 1182 aaPredicted RBP11.2□□□□□ -0.62
PRDM15-212ENST00000486812 R3HDM2Q9Y2K5 976 aaKnown RBP11.2□□□□□ -0.62
PRDM15-212ENST00000486812 KIF24Q5T7B8 1368 aa11.2□□□□□ -0.62
PRDM15-212ENST00000486812 EIF2S1P05198 315 aaKnown RBP11.2□□□□□ -0.62
PRDM15-212ENST00000486812 GARSP41250 739 aaKnown RBP11.2□□□□□ -0.62
PRDM15-212ENST00000486812 FAM133AQ8N9E0 248 aa11.2□□□□□ -0.62
PRDM15-212ENST00000486812 ATP11CQ8NB49 1132 aa11.2□□□□□ -0.62
PRDM15-212ENST00000486812 TRPV6Q9H1D0 765 aa11.2□□□□□ -0.62
PRDM15-212ENST00000486812 KRT82Q9NSB4 513 aa11.2□□□□□ -0.62
PRDM15-212ENST00000486812 USP40Q9NVE5 1235 aa11.2□□□□□ -0.62
PRDM15-212ENST00000486812 UHRF1BP1Q6BDS2 1440 aa11.2□□□□□ -0.62
PRDM15-212ENST00000486812 RNF113AO15541 343 aaKnown RBP11.19□□□□□ -0.62
PRDM15-212ENST00000486812 RHOBTB1O94844 696 aa11.19□□□□□ -0.62
PRDM15-212ENST00000486812 RAB14P61106 215 aa11.19□□□□□ -0.62
PRDM15-212ENST00000486812 CHST3Q7LGC8 479 aa11.19□□□□□ -0.62
PRDM15-212ENST00000486812 GSPT2Q8IYD1 628 aaKnown RBP11.19□□□□□ -0.62
PRDM15-212ENST00000486812 RSAD2Q8WXG1 361 aa11.19□□□□□ -0.62
PRDM15-212ENST00000486812 DACH2Q96NX9 599 aa11.19□□□□□ -0.62
PRDM15-212ENST00000486812 TRAPPC9Q96Q05 1148 aa11.19□□□□□ -0.62
PRDM15-212ENST00000486812 TMEM165Q9HC07 324 aa11.19□□□□□ -0.62
PRDM15-212ENST00000486812 LRWD1Q9UFC0 647 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms