RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 ZNF772Q68DY9 489 aaPredicted RBP14.65□□□□□ -0.06
HMGN1-216ENST00000486741 CCDC113Q9H0I3 377 aa14.65□□□□□ -0.06
HMGN1-216ENST00000486741 OSBPL5Q9H0X9 879 aaPredicted RBP14.65□□□□□ -0.06
HMGN1-216ENST00000486741 EPC1Q9H2F5 836 aa14.65□□□□□ -0.06
HMGN1-216ENST00000486741 SH3GLB2Q9NR46 395 aa14.65□□□□□ -0.06
HMGN1-216ENST00000486741 ATP6V0A2Q9Y487 856 aa14.65□□□□□ -0.06
HMGN1-216ENST00000486741 KIF1AQ12756 1690 aa14.65□□□□□ -0.06
HMGN1-216ENST00000486741 ZBTB5O15062 677 aa14.65□□□□□ -0.06
HMGN1-216ENST00000486741 PKN1Q16512 942 aa14.65□□□□□ -0.06
HMGN1-216ENST00000486741 CDC42EP5Q6NZY7 148 aa14.65□□□□□ -0.06
HMGN1-216ENST00000486741 SLC51AQ86UW1 340 aa14.65□□□□□ -0.06
HMGN1-216ENST00000486741 FOXP4Q8IVH2 680 aaPredicted RBP14.65□□□□□ -0.06
HMGN1-216ENST00000486741 DDX12PQ92771 950 aa14.65□□□□□ -0.06
HMGN1-216ENST00000486741 OGFRQ9NZT2 677 aa14.65□□□□□ -0.06
HMGN1-216ENST00000486741 RGPD2P0DJD1 1756 aa14.65□□□□□ -0.06
HMGN1-216ENST00000486741 CCNE1P24864 410 aa14.65□□□□□ -0.06
HMGN1-216ENST00000486741 CCZ1BP86790 482 aa14.65□□□□□ -0.06
HMGN1-216ENST00000486741 CCZ1P86791 482 aaPredicted RBP14.65□□□□□ -0.06
HMGN1-216ENST00000486741 SYDE2Q5VT97 1194 aa14.65□□□□□ -0.06
HMGN1-216ENST00000486741 CERKQ8TCT0 537 aa14.65□□□□□ -0.06
HMGN1-216ENST00000486741 BPIFA3Q9BQP9 254 aa14.65□□□□□ -0.06
HMGN1-216ENST00000486741 LRCH2Q5VUJ6 765 aa14.64□□□□□ -0.07
HMGN1-216ENST00000486741 MAATS1Q7Z4T9 603 aa14.64□□□□□ -0.07
HMGN1-216ENST00000486741 PIGOQ8TEQ8 1089 aa14.64□□□□□ -0.07
HMGN1-216ENST00000486741 ARMCX3Q9UH62 379 aaPredicted RBP14.64□□□□□ -0.07
HMGN1-216ENST00000486741 ACTN4O43707 911 aaKnown RBP14.64□□□□□ -0.07
HMGN1-216ENST00000486741 GJC1P36383 396 aa14.64□□□□□ -0.07
HMGN1-216ENST00000486741 ASIC2Q16515 512 aa14.64□□□□□ -0.07
HMGN1-216ENST00000486741 CCDC51Q96ER9 411 aa14.64□□□□□ -0.07
HMGN1-216ENST00000486741 DHTKD1Q96HY7 919 aaPredicted RBP14.64□□□□□ -0.07
HMGN1-216ENST00000486741 VPS18Q9P253 973 aa14.64□□□□□ -0.07
HMGN1-216ENST00000486741 KDM3AQ9Y4C1 1321 aa14.64□□□□□ -0.07
HMGN1-216ENST00000486741 SEC31AO94979 1220 aaKnown RBP14.64□□□□□ -0.07
HMGN1-216ENST00000486741 ZBTB7AO95365 584 aa14.64□□□□□ -0.07
HMGN1-216ENST00000486741 SFMBT2Q5VUG0 894 aa14.64□□□□□ -0.07
HMGN1-216ENST00000486741 E4F1Q66K89 784 aaPredicted RBP14.64□□□□□ -0.07
HMGN1-216ENST00000486741 TTLL6Q8N841 843 aa14.64□□□□□ -0.07
HMGN1-216ENST00000486741 TOPAZ1Q8N9V7 1692 aa14.64□□□□□ -0.07
HMGN1-216ENST00000486741 CHD2O14647 1828 aaKnown RBP14.64□□□□□ -0.07
HMGN1-216ENST00000486741 POTEB3A0JP26 581 aa14.63□□□□□ -0.07
HMGN1-216ENST00000486741 POTECB2RU33 542 aa14.63□□□□□ -0.07
HMGN1-216ENST00000486741 NR2F2P24468 414 aa14.63□□□□□ -0.07
HMGN1-216ENST00000486741 STAT2P52630 851 aa14.63□□□□□ -0.07
HMGN1-216ENST00000486741 CTTNQ14247 550 aaKnown RBP14.63□□□□□ -0.07
HMGN1-216ENST00000486741 POTEBQ6S5H4 581 aa14.63□□□□□ -0.07
HMGN1-216ENST00000486741 CRAMP1Q96RY5 1269 aa14.63□□□□□ -0.07
HMGN1-216ENST00000486741 BHMT2Q9H2M3 363 aa14.63□□□□□ -0.07
HMGN1-216ENST00000486741 PLEKHG2Q9H7P9 1386 aa14.63□□□□□ -0.07
HMGN1-216ENST00000486741 GPR75-ASB3A0A0A6YYF3 556 aa14.63□□□□□ -0.07
HMGN1-216ENST00000486741 PLA2G4BP0C869 781 aa14.63□□□□□ -0.07
HMGN1-216ENST00000486741 MCM3P25205 808 aa14.63□□□□□ -0.07
HMGN1-216ENST00000486741 CDR1P51861 262 aa14.63□□□□□ -0.07
HMGN1-216ENST00000486741 FAM83BQ5T0W9 1011 aa14.63□□□□□ -0.07
HMGN1-216ENST00000486741 RBM43Q6ZSC3 357 aaKnown RBP14.63□□□□□ -0.07
HMGN1-216ENST00000486741 MIER3Q7Z3K6 550 aa14.63□□□□□ -0.07
HMGN1-216ENST00000486741 SLFN12Q8IYM2 578 aa14.63□□□□□ -0.07
HMGN1-216ENST00000486741 CWC15Q9P013 229 aaKnown RBP14.63□□□□□ -0.07
HMGN1-216ENST00000486741 CALUO43852 315 aaPredicted RBP14.63□□□□□ -0.07
HMGN1-216ENST00000486741 XRCC5P13010 732 aaKnown RBP14.63□□□□□ -0.07
HMGN1-216ENST00000486741 UTP14CQ5TAP6 766 aaKnown RBP14.63□□□□□ -0.07
HMGN1-216ENST00000486741 TSPYL1Q9H0U9 437 aa14.63□□□□□ -0.07
HMGN1-216ENST00000486741 IL17RBQ9NRM6 502 aa14.63□□□□□ -0.07
HMGN1-216ENST00000486741 RABGAP1Q9Y3P9 1069 aa14.63□□□□□ -0.07
HMGN1-216ENST00000486741 CACNA1FO60840 1977 aa14.63□□□□□ -0.07
HMGN1-216ENST00000486741 ZMYND10O75800 440 aa14.63□□□□□ -0.07
HMGN1-216ENST00000486741 PDHBP11177 359 aa14.63□□□□□ -0.07
HMGN1-216ENST00000486741 EEF1GP26641 437 aaKnown RBP14.63□□□□□ -0.07
HMGN1-216ENST00000486741 FAM178BQ8IXR5 827 aa14.63□□□□□ -0.07
HMGN1-216ENST00000486741 FAM107BQ9H098 131 aa14.63□□□□□ -0.07
HMGN1-216ENST00000486741 LRRC4BQ9NT99 713 aa14.63□□□□□ -0.07
HMGN1-216ENST00000486741 MAD2L2Q9UI95 211 aa14.63□□□□□ -0.07
HMGN1-216ENST00000486741 STXBP3O00186 592 aa14.62□□□□□ -0.07
HMGN1-216ENST00000486741 MFAP3LO75121 409 aa14.62□□□□□ -0.07
HMGN1-216ENST00000486741 CUEDC2Q9H467 287 aa14.62□□□□□ -0.07
HMGN1-216ENST00000486741 SAR1BQ9Y6B6 198 aa14.62□□□□□ -0.07
HMGN1-216ENST00000486741 SPATA31A6Q5VVP1 1343 aa14.62□□□□□ -0.07
HMGN1-216ENST00000486741 FAM205AQ6ZU69 1335 aa14.62□□□□□ -0.07
HMGN1-216ENST00000486741 IFFO1Q0D2I5 559 aa14.62□□□□□ -0.07
HMGN1-216ENST00000486741 TMEM179Q6ZVK1 233 aa14.62□□□□□ -0.07
HMGN1-216ENST00000486741 C16orf86Q6ZW13 317 aa14.62□□□□□ -0.07
HMGN1-216ENST00000486741 COL23A1Q86Y22 540 aaPredicted RBP14.62□□□□□ -0.07
HMGN1-216ENST00000486741 MRPL11Q9Y3B7 192 aaKnown RBP14.62□□□□□ -0.07
HMGN1-216ENST00000486741 TCHHQ07283 1943 aa14.62□□□□□ -0.07
HMGN1-216ENST00000486741 MRC1P22897 1456 aa14.62□□□□□ -0.07
HMGN1-216ENST00000486741 PRPF6O94906 941 aaKnown RBP14.62□□□□□ -0.07
HMGN1-216ENST00000486741 ABCB4P21439 1286 aa14.62□□□□□ -0.07
HMGN1-216ENST00000486741 ZNF408Q9H9D4 720 aa14.62□□□□□ -0.07
HMGN1-216ENST00000486741 CLEC11AQ9Y240 323 aa14.62□□□□□ -0.07
HMGN1-216ENST00000486741 HPSEQ9Y251 543 aa14.62□□□□□ -0.07
HMGN1-216ENST00000486741 POTEFA5A3E0 1075 aa14.61□□□□□ -0.07
HMGN1-216ENST00000486741 ZBED4O75132 1171 aa14.61□□□□□ -0.07
HMGN1-216ENST00000486741 POTEIP0CG38 1075 aa14.61□□□□□ -0.07
HMGN1-216ENST00000486741 SETQ01105 290 aaPredicted RBP14.61□□□□□ -0.07
HMGN1-216ENST00000486741 RASSF7Q02833 373 aa14.61□□□□□ -0.07
HMGN1-216ENST00000486741 NCBP1Q09161 790 aaKnown RBP14.61□□□□□ -0.07
HMGN1-216ENST00000486741 ODR4Q5SWX8 454 aa14.61□□□□□ -0.07
HMGN1-216ENST00000486741 POTEGQ6S5H5 508 aa14.61□□□□□ -0.07
HMGN1-216ENST00000486741 POTEEQ6S8J3 1075 aa14.61□□□□□ -0.07
HMGN1-216ENST00000486741 H0YHG0 523 aa14.61□□□□□ -0.07
HMGN1-216ENST00000486741 CXCR5P32302 372 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms