RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 RWDD3Q9Y3V2 267 aa6.96□□□□□ -1.3
SMC4-218ENST00000486711 PAMP19021 973 aa6.95□□□□□ -1.3
SMC4-218ENST00000486711 SLC9A5Q14940 896 aa6.95□□□□□ -1.3
SMC4-218ENST00000486711 PPP2R5EQ16537 467 aa6.95□□□□□ -1.3
SMC4-218ENST00000486711 SOGA3Q5TF21 947 aa6.95□□□□□ -1.3
SMC4-218ENST00000486711 PRRT2Q7Z6L0 340 aaPredicted RBP6.95□□□□□ -1.3
SMC4-218ENST00000486711 B3GNT8Q7Z7M8 397 aa6.95□□□□□ -1.3
SMC4-218ENST00000486711 SAPCD2Q86UD0 394 aa6.95□□□□□ -1.3
SMC4-218ENST00000486711 DNAJC2Q99543 621 aaKnown RBP6.95□□□□□ -1.3
SMC4-218ENST00000486711 NPHP3-ACAD11A0A0J9YXS1 232 aa6.94□□□□□ -1.3
SMC4-218ENST00000486711 SH3D21A4FU49 640 aa6.94□□□□□ -1.3
SMC4-218ENST00000486711 PMLP29590 882 aa6.94□□□□□ -1.3
SMC4-218ENST00000486711 MC3RP41968 323 aa6.94□□□□□ -1.3
SMC4-218ENST00000486711 SHDQ96IW2 340 aa6.94□□□□□ -1.3
SMC4-218ENST00000486711 RXFP1Q9HBX9 757 aa6.94□□□□□ -1.3
SMC4-218ENST00000486711 SHROOM4Q9ULL8 1493 aa6.93□□□□□ -1.3
SMC4-218ENST00000486711 ANKRD34BA5PLL1 514 aa6.93□□□□□ -1.3
SMC4-218ENST00000486711 NPHS1O60500 1241 aa6.93□□□□□ -1.3
SMC4-218ENST00000486711 ZBTB7AO95365 584 aa6.93□□□□□ -1.3
SMC4-218ENST00000486711 CASP7P55210 303 aa6.93□□□□□ -1.3
SMC4-218ENST00000486711 KIAA1211LQ6NV74 962 aa6.93□□□□□ -1.3
SMC4-218ENST00000486711 VHLLQ6RSH7 139 aa6.93□□□□□ -1.3
SMC4-218ENST00000486711 CPNE8Q86YQ8 564 aa6.93□□□□□ -1.3
SMC4-218ENST00000486711 CKAP2LQ8IYA6 745 aa6.93□□□□□ -1.3
SMC4-218ENST00000486711 CRACR2BQ8N4Y2 399 aaPredicted RBP6.93□□□□□ -1.3
SMC4-218ENST00000486711 USP33Q8TEY7 942 aa6.93□□□□□ -1.3
SMC4-218ENST00000486711 MTA3Q9BTC8 594 aa6.93□□□□□ -1.3
SMC4-218ENST00000486711 KRTAP4-5Q9BYR2 181 aa6.93□□□□□ -1.3
SMC4-218ENST00000486711 USP40Q9NVE5 1235 aa6.93□□□□□ -1.3
SMC4-218ENST00000486711 GULP1Q9UBP9 304 aa6.93□□□□□ -1.3
SMC4-218ENST00000486711 NAT2P11245 290 aa6.92□□□□□ -1.3
SMC4-218ENST00000486711 WWC2Q6AWC2 1192 aa6.92□□□□□ -1.3
SMC4-218ENST00000486711 DBX2Q6ZNG2 339 aa6.92□□□□□ -1.3
SMC4-218ENST00000486711 ADGRG2Q8IZP9 1017 aa6.92□□□□□ -1.3
SMC4-218ENST00000486711 PMFBP1Q8TBY8 1022 aa6.92□□□□□ -1.3
SMC4-218ENST00000486711 CPA5Q8WXQ8 436 aa6.92□□□□□ -1.3
SMC4-218ENST00000486711 SPATA25Q9BR10 227 aa6.92□□□□□ -1.3
SMC4-218ENST00000486711 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.92□□□□□ -1.33e-7■■□□□ 12.9
SMC4-218ENST00000486711 FBLN5Q9UBX5 448 aa6.92□□□□□ -1.3
SMC4-218ENST00000486711 AKT3Q9Y243 479 aa6.92□□□□□ -1.3
SMC4-218ENST00000486711 R3HCC1Q9Y3T6 440 aaKnown RBP6.92□□□□□ -1.3
SMC4-218ENST00000486711 A0A1B0GTL3 188 aa6.91□□□□□ -1.3
SMC4-218ENST00000486711 RBL2Q08999 1139 aa6.91□□□□□ -1.3
SMC4-218ENST00000486711 ZFYVE27Q5T4F4 411 aa6.91□□□□□ -1.3
SMC4-218ENST00000486711 NT5DC1Q5TFE4 455 aa6.91□□□□□ -1.3
SMC4-218ENST00000486711 POMZP3Q6PJE2 187 aa6.91□□□□□ -1.3
SMC4-218ENST00000486711 SMARCC2Q8TAQ2 1214 aa6.91□□□□□ -1.3
SMC4-218ENST00000486711 ZNF526Q8TF50 670 aaPredicted RBP6.91□□□□□ -1.3
SMC4-218ENST00000486711 ANAPC16Q96DE5 110 aa6.91□□□□□ -1.3
SMC4-218ENST00000486711 BDH2Q9BUT1 245 aa6.91□□□□□ -1.3
SMC4-218ENST00000486711 BCAS3Q9H6U6 928 aa6.91□□□□□ -1.3
SMC4-218ENST00000486711 MRVI1Q9Y6F6 885 aa6.91□□□□□ -1.3
SMC4-218ENST00000486711 C7orf72A4D263 438 aa6.9□□□□□ -1.3
SMC4-218ENST00000486711 PPP1R11O60927 126 aaPredicted RBP6.9□□□□□ -1.3
SMC4-218ENST00000486711 ZNF143P52747 638 aaPredicted RBP6.9□□□□□ -1.3
SMC4-218ENST00000486711 PLP2Q04941 152 aa6.9□□□□□ -1.3
SMC4-218ENST00000486711 DLX2Q07687 328 aaPredicted RBP6.9□□□□□ -1.3
SMC4-218ENST00000486711 CACNB2Q08289 660 aaPredicted RBP6.9□□□□□ -1.3
SMC4-218ENST00000486711 RTP5Q14D33 572 aa6.9□□□□□ -1.3
SMC4-218ENST00000486711 DPH6Q7L8W6 267 aa6.9□□□□□ -1.3
SMC4-218ENST00000486711 ZNF513Q8N8E2 541 aaPredicted RBP6.9□□□□□ -1.3
SMC4-218ENST00000486711 BORCS6Q96GS4 357 aa6.9□□□□□ -1.3
SMC4-218ENST00000486711 APBA2Q99767 749 aa6.9□□□□□ -1.3
SMC4-218ENST00000486711 ZNF408Q9H9D4 720 aa6.9□□□□□ -1.3
SMC4-218ENST00000486711 APEX2Q9UBZ4 518 aa6.9□□□□□ -1.3
SMC4-218ENST00000486711 EMC9Q9Y3B6 208 aa6.9□□□□□ -1.3
SMC4-218ENST00000486711 KCNH1O95259 989 aa6.89□□□□□ -1.31
SMC4-218ENST00000486711 ADRB1P08588 477 aa6.89□□□□□ -1.31
SMC4-218ENST00000486711 SPATS1Q496A3 300 aa6.89□□□□□ -1.31
SMC4-218ENST00000486711 TNNI3KQ59H18 835 aa6.89□□□□□ -1.31
SMC4-218ENST00000486711 UBXN11Q5T124 520 aa6.89□□□□□ -1.31
SMC4-218ENST00000486711 DCP2Q8IU60 420 aaKnown RBP6.89□□□□□ -1.31
SMC4-218ENST00000486711 CARFQ8N187 725 aa6.89□□□□□ -1.31
SMC4-218ENST00000486711 BVESQ8NE79 360 aa6.89□□□□□ -1.31
SMC4-218ENST00000486711 COPS5Q92905 334 aa6.89□□□□□ -1.31
SMC4-218ENST00000486711 MMP19Q99542 508 aa6.89□□□□□ -1.31
SMC4-218ENST00000486711 CLEC1BQ9P126 229 aa6.89□□□□□ -1.31
SMC4-218ENST00000486711 JAG2Q9Y219 1238 aa6.89□□□□□ -1.31
SMC4-218ENST00000486711 LOC105371045A0A1W2PR82 267 aa6.88□□□□□ -1.31
SMC4-218ENST00000486711 NOP56O00567 594 aaKnown RBP6.88□□□□□ -1.31
SMC4-218ENST00000486711 U2SURPO15042 1029 aaKnown RBP6.88□□□□□ -1.31
SMC4-218ENST00000486711 PRICKLE3O43900 615 aaPredicted RBP6.88□□□□□ -1.31
SMC4-218ENST00000486711 FUCA1P04066 466 aa6.88□□□□□ -1.31
SMC4-218ENST00000486711 PLS3P13797 630 aa6.88□□□□□ -1.31
SMC4-218ENST00000486711 SCRN1Q12765 414 aa6.88□□□□□ -1.31
SMC4-218ENST00000486711 EFEMP1Q12805 493 aa6.88□□□□□ -1.31
SMC4-218ENST00000486711 NCAPHQ15003 741 aa6.88□□□□□ -1.31
SMC4-218ENST00000486711 NBPF6Q5VWK0 638 aa6.88□□□□□ -1.31
SMC4-218ENST00000486711 NBPF4Q96M43 638 aa6.88□□□□□ -1.31
SMC4-218ENST00000486711 TRIM55Q9BYV6 548 aa6.88□□□□□ -1.31
SMC4-218ENST00000486711 LNPKQ9C0E8 428 aa6.88□□□□□ -1.31
SMC4-218ENST00000486711 NTMQ9P121 344 aa6.88□□□□□ -1.31
SMC4-218ENST00000486711 CNOT11Q9UKZ1 510 aaKnown RBP6.88□□□□□ -1.31
SMC4-218ENST00000486711 NTRK1P04629 796 aa6.87□□□□□ -1.31
SMC4-218ENST00000486711 ETFBP38117 255 aa6.87□□□□□ -1.31
SMC4-218ENST00000486711 GJA9P57773 515 aa6.87□□□□□ -1.31
SMC4-218ENST00000486711 NFKB2Q00653 900 aa6.87□□□□□ -1.31
SMC4-218ENST00000486711 TTLL7Q6ZT98 887 aa6.87□□□□□ -1.31
SMC4-218ENST00000486711 ANKS3Q6ZW76 656 aa6.87□□□□□ -1.31
SMC4-218ENST00000486711 FAM169BQ8N8A8 192 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms