RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 ADCYAP1R1P41586 468 aa8.16□□□□□ -1.1
VPS50-218ENST00000485994 FXR1P51114 621 aaKnown RBP eCLIP8.16□□□□□ -1.1
VPS50-218ENST00000485994 ALDH5A1P51649 535 aaPredicted RBP8.16□□□□□ -1.1
VPS50-218ENST00000485994 ACLYP53396 1101 aa8.16□□□□□ -1.1
VPS50-218ENST00000485994 ANTXR2P58335 489 aa8.16□□□□□ -1.1
VPS50-218ENST00000485994 RPS6P62753 249 aaKnown RBP8.16□□□□□ -1.1
VPS50-218ENST00000485994 TNFAIP2Q03169 654 aa8.16□□□□□ -1.1
VPS50-218ENST00000485994 GRM4Q14833 912 aa8.16□□□□□ -1.1
VPS50-218ENST00000485994 WTAPQ15007 396 aa8.16□□□□□ -1.1
VPS50-218ENST00000485994 KCNA10Q16322 511 aa8.16□□□□□ -1.1
VPS50-218ENST00000485994 NSMFQ6X4W1 530 aa8.16□□□□□ -1.1
VPS50-218ENST00000485994 RNF207Q6ZRF8 634 aa8.16□□□□□ -1.1
VPS50-218ENST00000485994 STOX1Q6ZVD7 989 aa8.16□□□□□ -1.1
VPS50-218ENST00000485994 ANKRD33Q7Z3H0 272 aa8.16□□□□□ -1.1
VPS50-218ENST00000485994 RALYLQ86SE5 291 aaKnown RBP8.16□□□□□ -1.1
VPS50-218ENST00000485994 FBXO11Q86XK2 927 aa8.16□□□□□ -1.1
VPS50-218ENST00000485994 STAG2Q8N3U4 1231 aa8.16□□□□□ -1.1
VPS50-218ENST00000485994 TMEM87BQ96K49 555 aa8.16□□□□□ -1.1
VPS50-218ENST00000485994 IWS1Q96ST2 819 aa8.16□□□□□ -1.1
VPS50-218ENST00000485994 MPHOSPH6Q99547 160 aaKnown RBP8.16□□□□□ -1.1
VPS50-218ENST00000485994 MTMR7Q9Y216 660 aa8.16□□□□□ -1.1
VPS50-218ENST00000485994 SYNRGQ9UMZ2 1314 aa8.15□□□□□ -1.1
VPS50-218ENST00000485994 SLC27A2O14975 620 aa8.15□□□□□ -1.1
VPS50-218ENST00000485994 ZBTB5O15062 677 aa8.15□□□□□ -1.1
VPS50-218ENST00000485994 PGK1P00558 417 aa8.15□□□□□ -1.1
VPS50-218ENST00000485994 MCM5P33992 734 aa8.15□□□□□ -1.1
VPS50-218ENST00000485994 RTP1P59025 263 aa8.15□□□□□ -1.1
VPS50-218ENST00000485994 CDC37Q16543 378 aaPredicted RBP8.15□□□□□ -1.1
VPS50-218ENST00000485994 QRICH1Q2TAL8 776 aa8.15□□□□□ -1.1
VPS50-218ENST00000485994 LRIT3Q3SXY7 679 aa8.15□□□□□ -1.1
VPS50-218ENST00000485994 DUSP28Q4G0W2 176 aa8.15□□□□□ -1.1
VPS50-218ENST00000485994 GNASQ5JWF2 1037 aa8.15□□□□□ -1.1
VPS50-218ENST00000485994 RNF20Q5VTR2 975 aa8.15□□□□□ -1.1
VPS50-218ENST00000485994 ANO1Q5XXA6 986 aa8.15□□□□□ -1.1
VPS50-218ENST00000485994 CREB3L3Q68CJ9 461 aa8.15□□□□□ -1.1
VPS50-218ENST00000485994 CASC1Q6TDU7 716 aa8.15□□□□□ -1.1
VPS50-218ENST00000485994 CATIPQ7Z7H3 387 aa8.15□□□□□ -1.1
VPS50-218ENST00000485994 C7orf61Q8IZ16 206 aa8.15□□□□□ -1.1
VPS50-218ENST00000485994 SLC43A3Q8NBI5 491 aa8.15□□□□□ -1.1
VPS50-218ENST00000485994 KCNB2Q92953 911 aa8.15□□□□□ -1.1
VPS50-218ENST00000485994 CHMP4CQ96CF2 233 aa8.15□□□□□ -1.1
VPS50-218ENST00000485994 CCDC136Q96JN2 1154 aa8.15□□□□□ -1.1
VPS50-218ENST00000485994 KCNK17Q96T54 332 aa8.15□□□□□ -1.1
VPS50-218ENST00000485994 LZTS2Q9BRK4 669 aa8.15□□□□□ -1.1
VPS50-218ENST00000485994 AMNQ9BXJ7 453 aa8.15□□□□□ -1.1
VPS50-218ENST00000485994 ZHX1Q9UKY1 873 aaPredicted RBP8.15□□□□□ -1.1
VPS50-218ENST00000485994 TAF6LQ9Y6J9 622 aa8.15□□□□□ -1.1
VPS50-218ENST00000485994 MROH7Q68CQ1 1323 aa8.14□□□□□ -1.11
VPS50-218ENST00000485994 PNMA6FA0A0J9YX94 578 aa8.14□□□□□ -1.11
VPS50-218ENST00000485994 A0A1W2PQ45 241 aaPredicted RBP8.14□□□□□ -1.11
VPS50-218ENST00000485994 A0A1W2PQY0 241 aa8.14□□□□□ -1.11
VPS50-218ENST00000485994 PTPDC1A2A3K4 754 aa8.14□□□□□ -1.11
VPS50-218ENST00000485994 KIAA0355O15063 1070 aa8.14□□□□□ -1.11
VPS50-218ENST00000485994 ADCY6O43306 1168 aa8.14□□□□□ -1.11
VPS50-218ENST00000485994 CYTH3O43739 400 aa8.14□□□□□ -1.11
VPS50-218ENST00000485994 ZEB2O60315 1214 aa8.14□□□□□ -1.11
VPS50-218ENST00000485994 DDAH1O94760 285 aa8.14□□□□□ -1.11
VPS50-218ENST00000485994 ASGR1P07306 291 aa8.14□□□□□ -1.11
VPS50-218ENST00000485994 CALM1P0DP23 149 aa8.14□□□□□ -1.11
VPS50-218ENST00000485994 CALM2P0DP24 149 aa8.14□□□□□ -1.11
VPS50-218ENST00000485994 CALM3P0DP25 149 aa8.14□□□□□ -1.11
VPS50-218ENST00000485994 SMPD1P17405 629 aa8.14□□□□□ -1.11
VPS50-218ENST00000485994 MAGEA10P43363 369 aaPredicted RBP8.14□□□□□ -1.11
VPS50-218ENST00000485994 GNAQP50148 359 aa8.14□□□□□ -1.11
VPS50-218ENST00000485994 HSD17B4P51659 736 aa8.14□□□□□ -1.11
VPS50-218ENST00000485994 EXOSC10Q01780 885 aaKnown RBP8.14□□□□□ -1.11
VPS50-218ENST00000485994 TMEM67Q5HYA8 995 aa8.14□□□□□ -1.11
VPS50-218ENST00000485994 SGMS1Q86VZ5 419 aa8.14□□□□□ -1.11
VPS50-218ENST00000485994 TEX2Q8IWB9 1127 aa8.14□□□□□ -1.11
VPS50-218ENST00000485994 SYTL5Q8TDW5 730 aaPredicted RBP8.14□□□□□ -1.11
VPS50-218ENST00000485994 NSUN6Q8TEA1 469 aaKnown RBP8.14□□□□□ -1.11
VPS50-218ENST00000485994 TBC1D5Q92609 795 aa8.14□□□□□ -1.11
VPS50-218ENST00000485994 GLT1D1Q96MS3 346 aa8.14□□□□□ -1.11
VPS50-218ENST00000485994 SPZ1Q9BXG8 430 aa8.14□□□□□ -1.11
VPS50-218ENST00000485994 AP5M1Q9H0R1 490 aa8.14□□□□□ -1.11
VPS50-218ENST00000485994 LY9Q9HBG7 655 aa8.14□□□□□ -1.11
VPS50-218ENST00000485994 STARD7Q9NQZ5 370 aa8.14□□□□□ -1.11
VPS50-218ENST00000485994 PDGFCQ9NRA1 345 aa8.14□□□□□ -1.11
VPS50-218ENST00000485994 PRKAG2Q9UGJ0 569 aa8.14□□□□□ -1.11
VPS50-218ENST00000485994 ZMYND8Q9ULU4 1186 aaPredicted RBP8.14□□□□□ -1.11
VPS50-218ENST00000485994 PCDHA1Q9Y5I3 950 aa8.14□□□□□ -1.11
VPS50-218ENST00000485994 KIAA1217Q5T5P2 1943 aa8.13□□□□□ -1.11
VPS50-218ENST00000485994 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.13□□□□□ -1.11
VPS50-218ENST00000485994 DCDC2CA8MYV0 355 aa8.13□□□□□ -1.11
VPS50-218ENST00000485994 ARVCFO00192 962 aa8.13□□□□□ -1.11
VPS50-218ENST00000485994 SH2B2O14492 632 aaPredicted RBP8.13□□□□□ -1.11
VPS50-218ENST00000485994 DYNC1LI2O43237 492 aaPredicted RBP8.13□□□□□ -1.11
VPS50-218ENST00000485994 PRC1O43663 620 aa8.13□□□□□ -1.11
VPS50-218ENST00000485994 KPNA6O60684 536 aa8.13□□□□□ -1.11
VPS50-218ENST00000485994 CDC45O75419 566 aa8.13□□□□□ -1.11
VPS50-218ENST00000485994 HMGB1P09429 215 aaKnown RBP8.13□□□□□ -1.11
VPS50-218ENST00000485994 C6orf222P0C671 652 aaPredicted RBP8.13□□□□□ -1.11
VPS50-218ENST00000485994 KIF5BP33176 963 aa8.13□□□□□ -1.11
VPS50-218ENST00000485994 TLE2Q04725 743 aa8.13□□□□□ -1.11
VPS50-218ENST00000485994 KRT32Q14532 448 aa8.13□□□□□ -1.11
VPS50-218ENST00000485994 PPP2R5BQ15173 497 aa8.13□□□□□ -1.11
VPS50-218ENST00000485994 SLC35G1Q2M3R5 365 aa8.13□□□□□ -1.11
VPS50-218ENST00000485994 CCDC62Q6P9F0 684 aa8.13□□□□□ -1.11
VPS50-218ENST00000485994 SLC30A10Q6XR72 485 aa8.13□□□□□ -1.11
VPS50-218ENST00000485994 FBXL16Q8N461 479 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms