RNA–Protein interactions for RNA: ENST00000485983.6

SRGAP3-207, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best)

Gene SRGAP3, Length 5,677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-207ENST00000485983 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.52□□□□□ -0.57
SRGAP3-207ENST00000485983 GTPBP6O43824 516 aaPredicted RBP11.52□□□□□ -0.57
SRGAP3-207ENST00000485983 ZNF75DP51815 510 aa11.52□□□□□ -0.57
SRGAP3-207ENST00000485983 CDR2Q01850 454 aa11.52□□□□□ -0.57
SRGAP3-207ENST00000485983 C8orf34Q49A92 452 aa11.52□□□□□ -0.57
SRGAP3-207ENST00000485983 TTBK2Q6IQ55 1244 aa11.52□□□□□ -0.57
SRGAP3-207ENST00000485983 MGARPQ8TDB4 240 aa11.52□□□□□ -0.57
SRGAP3-207ENST00000485983 ITSN2Q9NZM3 1697 aa11.52□□□□□ -0.57
SRGAP3-207ENST00000485983 THAP12O43422 761 aa11.52□□□□□ -0.57
SRGAP3-207ENST00000485983 MED7O43513 233 aa11.52□□□□□ -0.57
SRGAP3-207ENST00000485983 HOXD10P28358 340 aa11.52□□□□□ -0.57
SRGAP3-207ENST00000485983 STAT2P52630 851 aa11.52□□□□□ -0.57
SRGAP3-207ENST00000485983 UBE3CQ15386 1083 aa11.52□□□□□ -0.57
SRGAP3-207ENST00000485983 EXOC3L4Q17RC7 722 aa11.52□□□□□ -0.57
SRGAP3-207ENST00000485983 RAPH1Q70E73 1250 aa11.52□□□□□ -0.57
SRGAP3-207ENST00000485983 SIX6OS1Q8N1H7 587 aa11.52□□□□□ -0.57
SRGAP3-207ENST00000485983 CCNYQ8ND76 341 aa11.52□□□□□ -0.57
SRGAP3-207ENST00000485983 MAGEF1Q9HAY2 307 aa11.52□□□□□ -0.57
SRGAP3-207ENST00000485983 SERPINB13Q9UIV8 391 aa11.52□□□□□ -0.57
SRGAP3-207ENST00000485983 POLIQ9UNA4 740 aa11.52□□□□□ -0.57
SRGAP3-207ENST00000485983 SAR1BQ9Y6B6 198 aa11.52□□□□□ -0.57
SRGAP3-207ENST00000485983 GOLGA8QA0A0J9YX86 632 aa11.51□□□□□ -0.57
SRGAP3-207ENST00000485983 GOLGA8OA6NCC3 632 aa11.51□□□□□ -0.57
SRGAP3-207ENST00000485983 GOLGA8NF8WBI6 632 aa11.51□□□□□ -0.57
SRGAP3-207ENST00000485983 CLGNO14967 610 aa11.51□□□□□ -0.57
SRGAP3-207ENST00000485983 UBXN2AP68543 259 aa11.51□□□□□ -0.57
SRGAP3-207ENST00000485983 MMEL1Q495T6 779 aa11.51□□□□□ -0.57
SRGAP3-207ENST00000485983 RC3H1Q5TC82 1133 aaKnown RBP11.51□□□□□ -0.57
SRGAP3-207ENST00000485983 DCLK2Q8N568 766 aa11.51□□□□□ -0.57
SRGAP3-207ENST00000485983 PRPF38AQ8NAV1 312 aaKnown RBP11.51□□□□□ -0.57
SRGAP3-207ENST00000485983 SLC39A2Q9NP94 309 aa11.51□□□□□ -0.57
SRGAP3-207ENST00000485983 GNAT1P11488 350 aa11.51□□□□□ -0.57
SRGAP3-207ENST00000485983 TFAMQ00059 246 aaKnown RBP11.51□□□□□ -0.57
SRGAP3-207ENST00000485983 DSTYKQ6XUX3 929 aa11.51□□□□□ -0.57
SRGAP3-207ENST00000485983 ELMOD1Q8N336 334 aa11.51□□□□□ -0.57
SRGAP3-207ENST00000485983 YWHAGP61981 247 aaKnown RBP eCLIP11.51□□□□□ -0.57
SRGAP3-207ENST00000485983 ASPHQ12797 758 aa11.51□□□□□ -0.57
SRGAP3-207ENST00000485983 FASTKD5Q7L8L6 764 aaKnown RBP11.51□□□□□ -0.57
SRGAP3-207ENST00000485983 EEPD1Q7L9B9 569 aa11.51□□□□□ -0.57
SRGAP3-207ENST00000485983 PI4KBQ9UBF8 816 aa11.51□□□□□ -0.57
SRGAP3-207ENST00000485983 HYOU1Q9Y4L1 999 aa11.51□□□□□ -0.57
SRGAP3-207ENST00000485983 BZW2Q9Y6E2 419 aaKnown RBP11.51□□□□□ -0.57
SRGAP3-207ENST00000485983 MED23Q9ULK4 1368 aa11.51□□□□□ -0.57
SRGAP3-207ENST00000485983 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.51□□□□□ -0.57
SRGAP3-207ENST00000485983 LAD1O00515 517 aa11.51□□□□□ -0.57
SRGAP3-207ENST00000485983 DPYSL4O14531 572 aa11.51□□□□□ -0.57
SRGAP3-207ENST00000485983 GDF11O95390 407 aa11.51□□□□□ -0.57
SRGAP3-207ENST00000485983 SLC4A1P02730 911 aa11.51□□□□□ -0.57
SRGAP3-207ENST00000485983 GCFC2P16383 781 aaKnown RBP11.51□□□□□ -0.57
SRGAP3-207ENST00000485983 SURF1Q15526 300 aa11.51□□□□□ -0.57
SRGAP3-207ENST00000485983 RNF219Q5W0B1 726 aaPredicted RBP11.51□□□□□ -0.57
SRGAP3-207ENST00000485983 FAM160B2Q86V87 743 aa11.51□□□□□ -0.57
SRGAP3-207ENST00000485983 GREM2Q9H772 168 aa11.51□□□□□ -0.57
SRGAP3-207ENST00000485983 DISP1Q96F81 1524 aa11.51□□□□□ -0.57
SRGAP3-207ENST00000485983 CAPN15O75808 1086 aa11.51□□□□□ -0.57
SRGAP3-207ENST00000485983 STMN1P16949 149 aa11.51□□□□□ -0.57
SRGAP3-207ENST00000485983 KCNA4P22459 653 aa11.51□□□□□ -0.57
SRGAP3-207ENST00000485983 CIITAP33076 1130 aa11.51□□□□□ -0.57
SRGAP3-207ENST00000485983 CTNNA1P35221 906 aaKnown RBP11.51□□□□□ -0.57
SRGAP3-207ENST00000485983 PPARGP37231 505 aaPredicted RBP11.51□□□□□ -0.57
SRGAP3-207ENST00000485983 SKIV2LQ15477 1246 aaKnown RBP11.51□□□□□ -0.57
SRGAP3-207ENST00000485983 PNMA8AQ86V59 439 aaPredicted RBP11.51□□□□□ -0.57
SRGAP3-207ENST00000485983 STK17AQ9UEE5 414 aa11.51□□□□□ -0.57
SRGAP3-207ENST00000485983 PSAPP07602 524 aa11.5□□□□□ -0.57
SRGAP3-207ENST00000485983 ZNF853P0CG23 659 aa11.5□□□□□ -0.57
SRGAP3-207ENST00000485983 RECQLP46063 649 aaPredicted RBP11.5□□□□□ -0.57
SRGAP3-207ENST00000485983 CAPN12Q6ZSI9 719 aa11.5□□□□□ -0.57
SRGAP3-207ENST00000485983 TTC30AQ86WT1 665 aa11.5□□□□□ -0.57
SRGAP3-207ENST00000485983 PI4K2BQ8TCG2 481 aa11.5□□□□□ -0.57
SRGAP3-207ENST00000485983 SMYD2Q9NRG4 433 aa11.5□□□□□ -0.57
SRGAP3-207ENST00000485983 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.5□□□□□ -0.57
SRGAP3-207ENST00000485983 FNDC3AQ9Y2H6 1198 aaKnown RBP11.5□□□□□ -0.57
SRGAP3-207ENST00000485983 PBRM1Q86U86 1689 aa11.5□□□□□ -0.57
SRGAP3-207ENST00000485983 USP17L3A6NCW0 530 aa11.5□□□□□ -0.57
SRGAP3-207ENST00000485983 USP17L4A6NCW7 530 aa11.5□□□□□ -0.57
SRGAP3-207ENST00000485983 USP17L1Q7RTZ2 530 aa11.5□□□□□ -0.57
SRGAP3-207ENST00000485983 TSC1Q92574 1164 aa11.5□□□□□ -0.57
SRGAP3-207ENST00000485983 COA7Q96BR5 231 aa11.5□□□□□ -0.57
SRGAP3-207ENST00000485983 EDC3Q96F86 508 aaKnown RBP11.5□□□□□ -0.57
SRGAP3-207ENST00000485983 RUNDC3BQ96NL0 473 aa11.5□□□□□ -0.57
SRGAP3-207ENST00000485983 TMEM206Q9H813 350 aa11.5□□□□□ -0.57
SRGAP3-207ENST00000485983 KLHL14Q9P2G3 628 aa11.5□□□□□ -0.57
SRGAP3-207ENST00000485983 HSPD1P10809 573 aaKnown RBP11.5□□□□□ -0.57
SRGAP3-207ENST00000485983 NPR1P16066 1061 aa11.5□□□□□ -0.57
SRGAP3-207ENST00000485983 ADD1P35611 737 aaKnown RBP11.5□□□□□ -0.57
SRGAP3-207ENST00000485983 PSMC2P35998 433 aaKnown RBP11.5□□□□□ -0.57
SRGAP3-207ENST00000485983 CCDC38Q502W7 563 aa11.5□□□□□ -0.57
SRGAP3-207ENST00000485983 KCTD1Q719H9 257 aa11.5□□□□□ -0.57
SRGAP3-207ENST00000485983 POTEDQ86YR6 584 aa11.5□□□□□ -0.57
SRGAP3-207ENST00000485983 TAB3Q8N5C8 712 aaPredicted RBP11.5□□□□□ -0.57
SRGAP3-207ENST00000485983 DNAAF3Q8N9W5 541 aa11.5□□□□□ -0.57
SRGAP3-207ENST00000485983 PIM2Q9P1W9 311 aa11.5□□□□□ -0.57
SRGAP3-207ENST00000485983 BNIP3LO60238 219 aa11.5□□□□□ -0.57
SRGAP3-207ENST00000485983 TTC4O95801 387 aa11.5□□□□□ -0.57
SRGAP3-207ENST00000485983 RPN1P04843 607 aaKnown RBP11.5□□□□□ -0.57
SRGAP3-207ENST00000485983 ACTN1P12814 892 aa11.5□□□□□ -0.57
SRGAP3-207ENST00000485983 PFKFB1P16118 471 aa11.5□□□□□ -0.57
SRGAP3-207ENST00000485983 U2AF2P26368 475 aaKnown RBP eCLIP11.5□□□□□ -0.57
SRGAP3-207ENST00000485983 INPP5BP32019 993 aa11.5□□□□□ -0.57
SRGAP3-207ENST00000485983 CLCN1P35523 988 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms