RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 NFIBO00712 420 aa6.71□□□□□ -1.34
CUX1-208ENST00000485792 SPTLC1O15269 473 aa6.71□□□□□ -1.34
CUX1-208ENST00000485792 CTAGE5O15320 804 aa6.71□□□□□ -1.34
CUX1-208ENST00000485792 SGPL1O95470 568 aa6.71□□□□□ -1.34
CUX1-208ENST00000485792 CCL5P13501 91 aa6.71□□□□□ -1.34
CUX1-208ENST00000485792 RXRAP19793 462 aa6.71□□□□□ -1.34
CUX1-208ENST00000485792 CYP2B6P20813 491 aa6.71□□□□□ -1.34
CUX1-208ENST00000485792 ADORA2AP29274 412 aa6.71□□□□□ -1.34
CUX1-208ENST00000485792 CYP2C19P33261 490 aa6.71□□□□□ -1.34
CUX1-208ENST00000485792 RGS2P41220 211 aa6.71□□□□□ -1.34
CUX1-208ENST00000485792 SLC1A4P43007 532 aa6.71□□□□□ -1.34
CUX1-208ENST00000485792 CLK2P49760 499 aaKnown RBP6.71□□□□□ -1.34
CUX1-208ENST00000485792 EXOSC10Q01780 885 aaKnown RBP6.71□□□□□ -1.34
CUX1-208ENST00000485792 CNTN2Q02246 1040 aa6.71□□□□□ -1.34
CUX1-208ENST00000485792 CACNB2Q08289 660 aaPredicted RBP6.71□□□□□ -1.34
CUX1-208ENST00000485792 TKFCQ3LXA3 575 aa6.71□□□□□ -1.34
CUX1-208ENST00000485792 CREB3L3Q68CJ9 461 aa6.71□□□□□ -1.34
CUX1-208ENST00000485792 IQCA1Q86XH1 822 aa6.71□□□□□ -1.34
CUX1-208ENST00000485792 MSL3Q8N5Y2 521 aaKnown RBP6.71□□□□□ -1.34
CUX1-208ENST00000485792 RGS22Q8NE09 1264 aa6.71□□□□□ -1.34
CUX1-208ENST00000485792 MORC4Q8TE76 937 aa6.71□□□□□ -1.34
CUX1-208ENST00000485792 TBC1D5Q92609 795 aa6.71□□□□□ -1.34
CUX1-208ENST00000485792 AGXT2Q9BYV1 514 aa6.71□□□□□ -1.34
CUX1-208ENST00000485792 A1CFQ9NQ94 594 aaKnown RBP6.71□□□□□ -1.34
CUX1-208ENST00000485792 NRBP1Q9UHY1 535 aa6.71□□□□□ -1.34
CUX1-208ENST00000485792 MAD2L2Q9UI95 211 aa6.71□□□□□ -1.34
CUX1-208ENST00000485792 OGDHLQ9ULD0 1010 aa6.71□□□□□ -1.34
CUX1-208ENST00000485792 STX8Q9UNK0 236 aa6.71□□□□□ -1.34
CUX1-208ENST00000485792 MTMR7Q9Y216 660 aa6.71□□□□□ -1.34
CUX1-208ENST00000485792 WDR19Q8NEZ3 1342 aa6.71□□□□□ -1.34
CUX1-208ENST00000485792 TRIOBPQ9H2D6 2365 aa6.71□□□□□ -1.34
CUX1-208ENST00000485792 NID2Q14112 1375 aa6.7□□□□□ -1.34
CUX1-208ENST00000485792 SH2B2O14492 632 aaPredicted RBP6.7□□□□□ -1.34
CUX1-208ENST00000485792 CDC45O75419 566 aa6.7□□□□□ -1.34
CUX1-208ENST00000485792 PLEKHA8P1O95397 391 aa6.7□□□□□ -1.34
CUX1-208ENST00000485792 SNAI1O95863 264 aaPredicted RBP6.7□□□□□ -1.34
CUX1-208ENST00000485792 ICAM1P05362 532 aa6.7□□□□□ -1.34
CUX1-208ENST00000485792 CENPBP07199 599 aaPredicted RBP6.7□□□□□ -1.34
CUX1-208ENST00000485792 NDUFV2P19404 249 aa6.7□□□□□ -1.34
CUX1-208ENST00000485792 SMARCA1P28370 1054 aa6.7□□□□□ -1.34
CUX1-208ENST00000485792 LIFRP42702 1097 aa6.7□□□□□ -1.34
CUX1-208ENST00000485792 UBXN2AP68543 259 aa6.7□□□□□ -1.34
CUX1-208ENST00000485792 NKX3-2P78367 333 aa6.7□□□□□ -1.34
CUX1-208ENST00000485792 C8orf34Q49A92 452 aa6.7□□□□□ -1.34
CUX1-208ENST00000485792 PRAMEF19Q5SWL8 479 aa6.7□□□□□ -1.34
CUX1-208ENST00000485792 GPATCH4Q5T3I0 446 aaKnown RBP6.7□□□□□ -1.34
CUX1-208ENST00000485792 SGMS1Q86VZ5 419 aa6.7□□□□□ -1.34
CUX1-208ENST00000485792 FAM133AQ8N9E0 248 aa6.7□□□□□ -1.34
CUX1-208ENST00000485792 PNMA1Q8ND90 353 aa6.7□□□□□ -1.34
CUX1-208ENST00000485792 CHST13Q8NET6 341 aa6.7□□□□□ -1.34
CUX1-208ENST00000485792 NCOA7Q8NI08 942 aa6.7□□□□□ -1.34
CUX1-208ENST00000485792 U2AF1L4Q8WU68 220 aaKnown RBP6.7□□□□□ -1.34
CUX1-208ENST00000485792 HLA-CQ95604 372 aa6.7□□□□□ -1.34
CUX1-208ENST00000485792 KIFC2Q96AC6 838 aa6.7□□□□□ -1.34
CUX1-208ENST00000485792 MAML3Q96JK9 1138 aa6.7□□□□□ -1.34
CUX1-208ENST00000485792 MTRQ99707 1265 aa6.7□□□□□ -1.34
CUX1-208ENST00000485792 UBA5Q9GZZ9 404 aa6.7□□□□□ -1.34
CUX1-208ENST00000485792 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.7□□□□□ -1.34
CUX1-208ENST00000485792 RIOX1Q9H6W3 641 aa6.7□□□□□ -1.34
CUX1-208ENST00000485792 POLR3EQ9NVU0 708 aa6.7□□□□□ -1.34
CUX1-208ENST00000485792 LIMD1Q9UGP4 676 aa6.7□□□□□ -1.34
CUX1-208ENST00000485792 BRPF3Q9ULD4 1205 aa6.7□□□□□ -1.34
CUX1-208ENST00000485792 TELO2Q9Y4R8 837 aa6.7□□□□□ -1.34
CUX1-208ENST00000485792 PCDHB3Q9Y5E6 796 aa6.7□□□□□ -1.34
CUX1-208ENST00000485792 EVPLQ92817 2033 aa6.69□□□□□ -1.34
CUX1-208ENST00000485792 GBF1Q92538 1859 aa6.69□□□□□ -1.34
CUX1-208ENST00000485792 LOC102724159A0A0B4J2E5 919 aa6.69□□□□□ -1.34
CUX1-208ENST00000485792 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.69□□□□□ -1.34
CUX1-208ENST00000485792 ZBED4O75132 1171 aa6.69□□□□□ -1.34
CUX1-208ENST00000485792 ZNF865P0CJ78 1059 aaPredicted RBP6.69□□□□□ -1.34
CUX1-208ENST00000485792 COL6A1P12109 1028 aa6.69□□□□□ -1.34
CUX1-208ENST00000485792 FCER1AP12319 257 aa6.69□□□□□ -1.34
CUX1-208ENST00000485792 HSPA4P34932 840 aa6.69□□□□□ -1.34
CUX1-208ENST00000485792 EVCP57679 992 aa6.69□□□□□ -1.34
CUX1-208ENST00000485792 GUCA2AQ02747 115 aa6.69□□□□□ -1.34
CUX1-208ENST00000485792 PWP2Q15269 919 aaKnown RBP6.69□□□□□ -1.34
CUX1-208ENST00000485792 TUSC1Q2TAM9 212 aa6.69□□□□□ -1.34
CUX1-208ENST00000485792 PUS10Q3MIT2 529 aaKnown RBP6.69□□□□□ -1.34
CUX1-208ENST00000485792 GJC2Q5T442 439 aaPredicted RBP6.69□□□□□ -1.34
CUX1-208ENST00000485792 ANO1Q5XXA6 986 aa6.69□□□□□ -1.34
CUX1-208ENST00000485792 SNRNP48Q6IEG0 339 aaKnown RBP6.69□□□□□ -1.34
CUX1-208ENST00000485792 CCDC174Q6PII3 467 aa6.69□□□□□ -1.34
CUX1-208ENST00000485792 CMTR1Q8N1G2 835 aaKnown RBP6.69□□□□□ -1.34
CUX1-208ENST00000485792 ANKLE1Q8NAG6 615 aa6.69□□□□□ -1.34
CUX1-208ENST00000485792 TET1Q8NFU7 2136 aa6.69□□□□□ -1.34
CUX1-208ENST00000485792 IL31RAQ8NI17 732 aa6.69□□□□□ -1.34
CUX1-208ENST00000485792 PCMTD1Q96MG8 357 aaPredicted RBP6.69□□□□□ -1.34
CUX1-208ENST00000485792 RNF208Q9H0X6 261 aa6.69□□□□□ -1.34
CUX1-208ENST00000485792 JMJD4Q9H9V9 463 aa6.69□□□□□ -1.34
CUX1-208ENST00000485792 IL21Q9HBE4 155 aa6.69□□□□□ -1.34
CUX1-208ENST00000485792 FBXO40Q9UH90 709 aa6.69□□□□□ -1.34
CUX1-208ENST00000485792 PNMA2Q9UL42 364 aa6.69□□□□□ -1.34
CUX1-208ENST00000485792 SNX14Q9Y5W7 946 aa6.69□□□□□ -1.34
CUX1-208ENST00000485792 CNTNAP5Q8WYK1 1306 aa6.69□□□□□ -1.34
CUX1-208ENST00000485792 SYNGAP1Q96PV0 1343 aa6.69□□□□□ -1.34
CUX1-208ENST00000485792 SCN5AQ14524 2016 aa6.69□□□□□ -1.34
CUX1-208ENST00000485792 MYO9BQ13459 2157 aa6.68□□□□□ -1.34
CUX1-208ENST00000485792 SEPT4O43236 478 aa6.68□□□□□ -1.34
CUX1-208ENST00000485792 EDIL3O43854 480 aa6.68□□□□□ -1.34
CUX1-208ENST00000485792 RAD21O60216 631 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms