RNA–Protein interactions for RNA: ENST00000485513.1

HLA-F-227, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-227ENST00000485513 SYTL5Q8TDW5 730 aaPredicted RBP29.97■■■□□ 2.39
HLA-F-227ENST00000485513 MTG1Q9BT17 334 aaPredicted RBP29.97■■■□□ 2.39
HLA-F-227ENST00000485513 NOC4LQ9BVI4 516 aaKnown RBP29.97■■■□□ 2.39
HLA-F-227ENST00000485513 TTLL4Q14679 1199 aa29.96■■■□□ 2.39
HLA-F-227ENST00000485513 RASIP1Q5U651 963 aa29.96■■■□□ 2.39
HLA-F-227ENST00000485513 STAG2Q8N3U4 1231 aa29.96■■■□□ 2.39
HLA-F-227ENST00000485513 NSUN6Q8TEA1 469 aaKnown RBP29.96■■■□□ 2.39
HLA-F-227ENST00000485513 MYLIPQ8WY64 445 aa29.96■■■□□ 2.39
HLA-F-227ENST00000485513 COPS5Q92905 334 aa29.96■■■□□ 2.39
HLA-F-227ENST00000485513 TAAR1Q96RJ0 339 aa29.96■■■□□ 2.39
HLA-F-227ENST00000485513 U3KPZ7 1027 aaPredicted RBP29.96■■■□□ 2.39
HLA-F-227ENST00000485513 PTH1RQ03431 593 aa29.95■■■□□ 2.39
HLA-F-227ENST00000485513 COL20A1Q9P218 1284 aa29.95■■■□□ 2.39
HLA-F-227ENST00000485513 SCN10AQ9Y5Y9 1956 aa29.94■■■□□ 2.38
HLA-F-227ENST00000485513 A6NJR5 290 aa29.94■■■□□ 2.38
HLA-F-227ENST00000485513 KLRF2D3W0D1 207 aa29.94■■■□□ 2.38
HLA-F-227ENST00000485513 CYP21A2P08686 494 aa29.94■■■□□ 2.38
HLA-F-227ENST00000485513 CCL23P55773 120 aa29.94■■■□□ 2.38
HLA-F-227ENST00000485513 RMDN3Q96TC7 470 aa29.94■■■□□ 2.38
HLA-F-227ENST00000485513 KPNA6O60684 536 aa29.93■■■□□ 2.38
HLA-F-227ENST00000485513 ARIH2O95376 493 aa29.93■■■□□ 2.38
HLA-F-227ENST00000485513 SUPT20HL2P0C7V6 817 aa29.93■■■□□ 2.38
HLA-F-227ENST00000485513 IWS1Q96ST2 819 aa29.93■■■□□ 2.38
HLA-F-227ENST00000485513 AMNQ9BXJ7 453 aa29.93■■■□□ 2.38
HLA-F-227ENST00000485513 TRMT13Q9NUP7 481 aaKnown RBP29.93■■■□□ 2.38
HLA-F-227ENST00000485513 FGBP02675 491 aa29.92■■■□□ 2.38
HLA-F-227ENST00000485513 MAFAQ8NHW3 353 aaPredicted RBP29.92■■■□□ 2.38
HLA-F-227ENST00000485513 HERVK_113Q902F9 699 aa29.92■■■□□ 2.38
HLA-F-227ENST00000485513 TIFAQ96CG3 184 aa29.92■■■□□ 2.38
HLA-F-227ENST00000485513 WNT8AQ9H1J5 351 aa29.92■■■□□ 2.38
HLA-F-227ENST00000485513 MTIF3Q9H2K0 278 aaKnown RBP29.92■■■□□ 2.38
HLA-F-227ENST00000485513 MAD2L2Q9UI95 211 aa29.92■■■□□ 2.38
HLA-F-227ENST00000485513 FOSL2P15408 326 aa29.91■■■□□ 2.38
HLA-F-227ENST00000485513 STXBP2Q15833 593 aa29.91■■■□□ 2.38
HLA-F-227ENST00000485513 NBPF20Q3BBV1 942 aa29.91■■■□□ 2.38
HLA-F-227ENST00000485513 FAM47CQ5HY64 1035 aa29.91■■■□□ 2.38
HLA-F-227ENST00000485513 ARHGEF16Q5VV41 709 aa29.91■■■□□ 2.38
HLA-F-227ENST00000485513 CCDC62Q6P9F0 684 aa29.91■■■□□ 2.38
HLA-F-227ENST00000485513 SEPT14Q6ZU15 432 aa29.91■■■□□ 2.38
HLA-F-227ENST00000485513 KIAA1217Q5T5P2 1943 aa29.9■■■□□ 2.38
HLA-F-227ENST00000485513 UNC80Q8N2C7 3258 aa29.9■■■□□ 2.38
HLA-F-227ENST00000485513 PALM3A6NDB9 673 aaPredicted RBP29.9■■■□□ 2.38
HLA-F-227ENST00000485513 GRXCR1A8MXD5 290 aa29.9■■■□□ 2.38
HLA-F-227ENST00000485513 IFIT3O14879 490 aaKnown RBP29.9■■■□□ 2.38
HLA-F-227ENST00000485513 CFBP00751 764 aa29.9■■■□□ 2.38
HLA-F-227ENST00000485513 CYP2C9P11712 490 aa29.9■■■□□ 2.38
HLA-F-227ENST00000485513 RALYLQ86SE5 291 aaKnown RBP29.9■■■□□ 2.38
HLA-F-227ENST00000485513 PHF6Q8IWS0 365 aaKnown RBP eCLIP29.9■■■□□ 2.38
HLA-F-227ENST00000485513 MTMR8Q96EF0 704 aa29.9■■■□□ 2.38
HLA-F-227ENST00000485513 PBX4Q9BYU1 374 aa29.9■■■□□ 2.38
HLA-F-227ENST00000485513 ZNF576Q9H609 170 aa29.9■■■□□ 2.38
HLA-F-227ENST00000485513 CDH23Q9H251 3354 aa29.9■■■□□ 2.38
HLA-F-227ENST00000485513 ERICH2A1L162 156 aa29.89■■■□□ 2.38
HLA-F-227ENST00000485513 ZBTB5O15062 677 aa29.89■■■□□ 2.38
HLA-F-227ENST00000485513 SGSM2O43147 1006 aa29.89■■■□□ 2.38
HLA-F-227ENST00000485513 EIF2AK2P19525 551 aaKnown RBP29.89■■■□□ 2.38
HLA-F-227ENST00000485513 NFRKBQ6P4R8 1299 aa29.89■■■□□ 2.38
HLA-F-227ENST00000485513 RPUSD2Q8IZ73 545 aaKnown RBP29.89■■■□□ 2.38
HLA-F-227ENST00000485513 CXXC1Q9P0U4 656 aaPredicted RBP29.89■■■□□ 2.38
HLA-F-227ENST00000485513 CUL9Q8IWT3 2517 aa29.88■■■□□ 2.37
HLA-F-227ENST00000485513 GH1P01241 217 aa29.88■■■□□ 2.37
HLA-F-227ENST00000485513 PBX2P40425 430 aa29.88■■■□□ 2.37
HLA-F-227ENST00000485513 GRIN2CQ14957 1233 aa29.88■■■□□ 2.37
HLA-F-227ENST00000485513 LY6KQ17RY6 165 aa29.88■■■□□ 2.37
HLA-F-227ENST00000485513 OTOP2Q7RTS6 562 aa29.88■■■□□ 2.37
HLA-F-227ENST00000485513 NCOA7Q8NI08 942 aa29.88■■■□□ 2.37
HLA-F-227ENST00000485513 SCLYQ96I15 445 aa29.88■■■□□ 2.37
HLA-F-227ENST00000485513 PXMP2Q9NR77 195 aa29.88■■■□□ 2.37
HLA-F-227ENST00000485513 PCDHA1Q9Y5I3 950 aa29.88■■■□□ 2.37
HLA-F-227ENST00000485513 TAF6LQ9Y6J9 622 aa29.88■■■□□ 2.37
HLA-F-227ENST00000485513 E7EWF7 191 aa29.87■■■□□ 2.37
HLA-F-227ENST00000485513 OPLAHO14841 1288 aa29.87■■■□□ 2.37
HLA-F-227ENST00000485513 PPP1R11O60927 126 aaPredicted RBP29.87■■■□□ 2.37
HLA-F-227ENST00000485513 HSD17B4P51659 736 aa29.87■■■□□ 2.37
HLA-F-227ENST00000485513 GRM4Q14833 912 aa29.87■■■□□ 2.37
HLA-F-227ENST00000485513 SART3Q15020 963 aaKnown RBP29.87■■■□□ 2.37
HLA-F-227ENST00000485513 PPP1R13LQ8WUF5 828 aa29.87■■■□□ 2.37
HLA-F-227ENST00000485513 AFG1LQ8WV93 481 aa29.87■■■□□ 2.37
HLA-F-227ENST00000485513 EYSQ5T1H1 3165 aa29.87■■■□□ 2.37
HLA-F-227ENST00000485513 EIF3JO75822 258 aaKnown RBP29.86■■■□□ 2.37
HLA-F-227ENST00000485513 NR3C2P08235 984 aa29.86■■■□□ 2.37
HLA-F-227ENST00000485513 GHRHRQ02643 423 aa29.86■■■□□ 2.37
HLA-F-227ENST00000485513 PTPN11Q06124 597 aaPredicted RBP29.86■■■□□ 2.37
HLA-F-227ENST00000485513 ARHGAP1Q07960 439 aa29.86■■■□□ 2.37
HLA-F-227ENST00000485513 WTAPQ15007 396 aa29.86■■■□□ 2.37
HLA-F-227ENST00000485513 CHST3Q7LGC8 479 aa29.85■■■□□ 2.37
HLA-F-227ENST00000485513 HOMER1Q86YM7 354 aa29.85■■■□□ 2.37
HLA-F-227ENST00000485513 SENP2Q9HC62 589 aa29.85■■■□□ 2.37
HLA-F-227ENST00000485513 MAP3K20Q9NYL2 800 aaKnown RBP29.85■■■□□ 2.37
HLA-F-227ENST00000485513 MSRAQ9UJ68 235 aa29.85■■■□□ 2.37
HLA-F-227ENST00000485513 BAZ2BQ9UIF8 2168 aaKnown RBP29.85■■■□□ 2.37
HLA-F-227ENST00000485513 MMP3P08254 477 aa29.84■■■□□ 2.37
HLA-F-227ENST00000485513 CHMP4BP1P59074 171 aa29.84■■■□□ 2.37
HLA-F-227ENST00000485513 TRAF1Q13077 416 aa29.84■■■□□ 2.37
HLA-F-227ENST00000485513 RAB30Q15771 203 aa29.84■■■□□ 2.37
HLA-F-227ENST00000485513 SLC35G1Q2M3R5 365 aa29.84■■■□□ 2.37
HLA-F-227ENST00000485513 STOX1Q6ZVD7 989 aa29.84■■■□□ 2.37
HLA-F-227ENST00000485513 SAMD3Q8N6K7 520 aa29.84■■■□□ 2.37
HLA-F-227ENST00000485513 MAP4K1Q92918 833 aa29.84■■■□□ 2.37
HLA-F-227ENST00000485513 RIOX1Q9H6W3 641 aa29.84■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms