RNA–Protein interactions for RNA: ENST00000485140.1

VPS50-217, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-217ENST00000485140 TACR1P25103 407 aa5.67□□□□□ -1.5
VPS50-217ENST00000485140 RPL11P62913 178 aaKnown RBP5.67□□□□□ -1.5
VPS50-217ENST00000485140 CACNB2Q08289 660 aaPredicted RBP5.67□□□□□ -1.5
VPS50-217ENST00000485140 TESK1Q15569 626 aa5.67□□□□□ -1.5
VPS50-217ENST00000485140 EEPD1Q7L9B9 569 aa5.67□□□□□ -1.5
VPS50-217ENST00000485140 SAPCD2Q86UD0 394 aa5.67□□□□□ -1.5
VPS50-217ENST00000485140 DDX11Q96FC9 970 aa5.67□□□□□ -1.5
VPS50-217ENST00000485140 MTA3Q9BTC8 594 aa5.67□□□□□ -1.5
VPS50-217ENST00000485140 NTMQ9P121 344 aa5.67□□□□□ -1.5
VPS50-217ENST00000485140 LRP2BPQ9P2M1 347 aa5.67□□□□□ -1.5
VPS50-217ENST00000485140 C7orf72A4D263 438 aa5.66□□□□□ -1.5
VPS50-217ENST00000485140 MAFKO60675 156 aa5.66□□□□□ -1.5
VPS50-217ENST00000485140 VAMP4O75379 141 aa5.66□□□□□ -1.5
VPS50-217ENST00000485140 CYP7B1O75881 506 aa5.66□□□□□ -1.5
VPS50-217ENST00000485140 SCG5P05408 212 aa5.66□□□□□ -1.5
VPS50-217ENST00000485140 CYP2C8P10632 490 aa5.66□□□□□ -1.5
VPS50-217ENST00000485140 HTRA3P83110 453 aa5.66□□□□□ -1.5
VPS50-217ENST00000485140 ARID5AQ03989 594 aa5.66□□□□□ -1.5
VPS50-217ENST00000485140 SCRN1Q12765 414 aa5.66□□□□□ -1.5
VPS50-217ENST00000485140 C9orf131Q5VYM1 1079 aa5.66□□□□□ -1.5
VPS50-217ENST00000485140 GTF2IRD2BQ6EKJ0 949 aa5.66□□□□□ -1.5
VPS50-217ENST00000485140 DPH6Q7L8W6 267 aa5.66□□□□□ -1.5
VPS50-217ENST00000485140 GTF2IRD2Q86UP8 949 aa5.66□□□□□ -1.5
VPS50-217ENST00000485140 PANK1Q8TE04 598 aa5.66□□□□□ -1.5
VPS50-217ENST00000485140 PPP1R14AQ96A00 147 aa5.66□□□□□ -1.5
VPS50-217ENST00000485140 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.66□□□□□ -1.5
VPS50-217ENST00000485140 XYLT2Q9H1B5 865 aa5.66□□□□□ -1.5
VPS50-217ENST00000485140 USP40Q9NVE5 1235 aa5.66□□□□□ -1.5
VPS50-217ENST00000485140 COA3Q9Y2R0 106 aaPredicted RBP5.66□□□□□ -1.5
VPS50-217ENST00000485140 NUB1Q9Y5A7 615 aa5.66□□□□□ -1.5
VPS50-217ENST00000485140 TIMM13Q9Y5L4 95 aaPredicted RBP5.66□□□□□ -1.5
VPS50-217ENST00000485140 IQCA1LA6NCM1 817 aa5.65□□□□□ -1.5
VPS50-217ENST00000485140 MEFVO15553 781 aaPredicted RBP5.65□□□□□ -1.5
VPS50-217ENST00000485140 SMARCA5O60264 1052 aaPredicted RBP5.65□□□□□ -1.5
VPS50-217ENST00000485140 FOXD2O60548 495 aaPredicted RBP5.65□□□□□ -1.5
VPS50-217ENST00000485140 PLS3P13797 630 aa5.65□□□□□ -1.5
VPS50-217ENST00000485140 ZFYVE27Q5T4F4 411 aa5.65□□□□□ -1.5
VPS50-217ENST00000485140 LIPIQ6XZB0 460 aa5.65□□□□□ -1.5
VPS50-217ENST00000485140 ETV3LQ6ZN32 361 aa5.65□□□□□ -1.5
VPS50-217ENST00000485140 FAM124AQ86V42 546 aa5.65□□□□□ -1.5
VPS50-217ENST00000485140 FAM178BQ8IXR5 827 aa5.65□□□□□ -1.5
VPS50-217ENST00000485140 TTLL6Q8N841 843 aa5.65□□□□□ -1.5
VPS50-217ENST00000485140 ZNF513Q8N8E2 541 aaPredicted RBP5.65□□□□□ -1.5
VPS50-217ENST00000485140 MRGPRX3Q96LB0 322 aa5.65□□□□□ -1.5
VPS50-217ENST00000485140 WRNIP1Q96S55 665 aa5.65□□□□□ -1.5
VPS50-217ENST00000485140 MCMBPQ9BTE3 642 aa5.65□□□□□ -1.5
VPS50-217ENST00000485140 RWDD3Q9Y3V2 267 aa5.65□□□□□ -1.5
VPS50-217ENST00000485140 H7BY64 318 aa5.64□□□□□ -1.51
VPS50-217ENST00000485140 SMAD7O15105 426 aaKnown RBP5.64□□□□□ -1.51
VPS50-217ENST00000485140 CELA3BP08861 270 aa5.64□□□□□ -1.51
VPS50-217ENST00000485140 GJA9P57773 515 aa5.64□□□□□ -1.51
VPS50-217ENST00000485140 SV2CQ496J9 727 aa5.64□□□□□ -1.51
VPS50-217ENST00000485140 CPNE8Q86YQ8 564 aa5.64□□□□□ -1.51
VPS50-217ENST00000485140 Q8N1Y9 231 aa5.64□□□□□ -1.51
VPS50-217ENST00000485140 FAM169BQ8N8A8 192 aa5.64□□□□□ -1.51
VPS50-217ENST00000485140 SLC43A3Q8NBI5 491 aa5.64□□□□□ -1.51
VPS50-217ENST00000485140 FNIP1Q8TF40 1166 aa5.64□□□□□ -1.51
VPS50-217ENST00000485140 DIO2Q92813 273 aa5.64□□□□□ -1.51
VPS50-217ENST00000485140 CLEC1BQ9P126 229 aa5.64□□□□□ -1.51
VPS50-217ENST00000485140 GULP1Q9UBP9 304 aa5.64□□□□□ -1.51
VPS50-217ENST00000485140 APEX2Q9UBZ4 518 aa5.64□□□□□ -1.51
VPS50-217ENST00000485140 SUSD5O60279 629 aa5.63□□□□□ -1.51
VPS50-217ENST00000485140 DDAH1O94760 285 aa5.63□□□□□ -1.51
VPS50-217ENST00000485140 FUCA1P04066 466 aa5.63□□□□□ -1.51
VPS50-217ENST00000485140 THBDP07204 575 aa5.63□□□□□ -1.51
VPS50-217ENST00000485140 SNRPB2P08579 225 aaKnown RBP5.63□□□□□ -1.51
VPS50-217ENST00000485140 PMLP29590 882 aa5.63□□□□□ -1.51
VPS50-217ENST00000485140 LTBRP36941 435 aa5.63□□□□□ -1.51
VPS50-217ENST00000485140 LIMS1P48059 325 aa5.63□□□□□ -1.51
VPS50-217ENST00000485140 SLURP1P55000 103 aa5.63□□□□□ -1.51
VPS50-217ENST00000485140 NCKAP1LP55160 1127 aa5.63□□□□□ -1.51
VPS50-217ENST00000485140 DBX2Q6ZNG2 339 aa5.63□□□□□ -1.51
VPS50-217ENST00000485140 MIB1Q86YT6 1006 aa5.63□□□□□ -1.51
VPS50-217ENST00000485140 NPLOC4Q8TAT6 608 aa5.63□□□□□ -1.51
VPS50-217ENST00000485140 A0A0G2JLL6 359 aaPredicted RBP5.62□□□□□ -1.51
VPS50-217ENST00000485140 UNCXA6NJT0 531 aa5.62□□□□□ -1.51
VPS50-217ENST00000485140 C22orf46C9J442 243 aa5.62□□□□□ -1.51
VPS50-217ENST00000485140 FFAR3O14843 346 aa5.62□□□□□ -1.51
VPS50-217ENST00000485140 ATF2P15336 505 aa5.62□□□□□ -1.51
VPS50-217ENST00000485140 KIAA2012Q0VF49 1180 aa5.62□□□□□ -1.51
VPS50-217ENST00000485140 SPATS1Q496A3 300 aa5.62□□□□□ -1.51
VPS50-217ENST00000485140 VWA3BQ502W6 1294 aa5.62□□□□□ -1.51
VPS50-217ENST00000485140 LARP1BQ659C4 914 aaKnown RBP5.62□□□□□ -1.51
VPS50-217ENST00000485140 CYP4F22Q6NT55 531 aa5.62□□□□□ -1.51
VPS50-217ENST00000485140 RSPO2Q6UXX9 243 aaPredicted RBP5.62□□□□□ -1.51
VPS50-217ENST00000485140 ZNF227Q86WZ6 799 aa5.62□□□□□ -1.51
VPS50-217ENST00000485140 LINC00482Q8N8I6 264 aa5.62□□□□□ -1.51
VPS50-217ENST00000485140 PHOSPHO1Q8TCT1 267 aa5.62□□□□□ -1.51
VPS50-217ENST00000485140 PLEKHO2Q8TD55 490 aa5.62□□□□□ -1.51
VPS50-217ENST00000485140 TMEM169Q96HH4 297 aa5.62□□□□□ -1.51
VPS50-217ENST00000485140 SGSM3Q96HU1 749 aa5.62□□□□□ -1.51
VPS50-217ENST00000485140 C20orf173Q96LM9 149 aa5.62□□□□□ -1.51
VPS50-217ENST00000485140 YIPF4Q9BSR8 244 aa5.62□□□□□ -1.51
VPS50-217ENST00000485140 MARCH2Q9P0N8 246 aa5.62□□□□□ -1.51
VPS50-217ENST00000485140 ZNF652Q9Y2D9 606 aa5.62□□□□□ -1.51
VPS50-217ENST00000485140 X6R8D5 127 aa5.62□□□□□ -1.51
VPS50-217ENST00000485140 OTOL1A6NHN0 477 aaPredicted RBP5.61□□□□□ -1.51
VPS50-217ENST00000485140 NTRK1P04629 796 aa5.61□□□□□ -1.51
VPS50-217ENST00000485140 SARSP49591 514 aaKnown RBP5.61□□□□□ -1.51
VPS50-217ENST00000485140 MAP4K2Q12851 820 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms