RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 PFKFB3Q16875 520 aaPredicted RBP20.49■□□□□ 0.87
SREBF1-213ENST00000485080 NECAB2Q7Z6G3 386 aa20.49■□□□□ 0.87
SREBF1-213ENST00000485080 KIF2CQ99661 725 aa20.49■□□□□ 0.87
SREBF1-213ENST00000485080 RNF26Q9BY78 433 aaPredicted RBP20.49■□□□□ 0.87
SREBF1-213ENST00000485080 PSTPIP2Q9H939 334 aa20.49■□□□□ 0.87
SREBF1-213ENST00000485080 BARHL2Q9NY43 387 aa20.49■□□□□ 0.87
SREBF1-213ENST00000485080 Q9Y3F1 56 aa20.49■□□□□ 0.87
SREBF1-213ENST00000485080 MEIS2O14770 477 aa20.48■□□□□ 0.87
SREBF1-213ENST00000485080 HOXA13P31271 388 aaPredicted RBP20.48■□□□□ 0.87
SREBF1-213ENST00000485080 NEK4P51957 841 aa20.48■□□□□ 0.87
SREBF1-213ENST00000485080 AK2P54819 239 aa20.48■□□□□ 0.87
SREBF1-213ENST00000485080 ARHGEF16Q5VV41 709 aa20.48■□□□□ 0.87
SREBF1-213ENST00000485080 WWC2Q6AWC2 1192 aa20.48■□□□□ 0.87
SREBF1-213ENST00000485080 HEATR3Q7Z4Q2 680 aa20.48■□□□□ 0.87
SREBF1-213ENST00000485080 PAWRQ96IZ0 340 aaKnown RBP20.48■□□□□ 0.87
SREBF1-213ENST00000485080 PDCD2LQ9BRP1 358 aa20.48■□□□□ 0.87
SREBF1-213ENST00000485080 GLT8D2Q9H1C3 349 aa20.48■□□□□ 0.87
SREBF1-213ENST00000485080 UPF3AQ9H1J1 476 aaKnown RBP20.48■□□□□ 0.87
SREBF1-213ENST00000485080 XPNPEP3Q9NQH7 507 aa20.48■□□□□ 0.87
SREBF1-213ENST00000485080 TPCN1Q9ULQ1 816 aa20.48■□□□□ 0.87
SREBF1-213ENST00000485080 DDX49Q9Y6V7 483 aaKnown RBP20.48■□□□□ 0.87
SREBF1-213ENST00000485080 STXBP3O00186 592 aa20.47■□□□□ 0.87
SREBF1-213ENST00000485080 ADCY6O43306 1168 aa20.47■□□□□ 0.87
SREBF1-213ENST00000485080 PFKFB2O60825 505 aa20.47■□□□□ 0.87
SREBF1-213ENST00000485080 ADAMTS4O75173 837 aa20.47■□□□□ 0.87
SREBF1-213ENST00000485080 EIF3JO75822 258 aaKnown RBP20.47■□□□□ 0.87
SREBF1-213ENST00000485080 NR3C2P08235 984 aa20.47■□□□□ 0.87
SREBF1-213ENST00000485080 SCG2P13521 617 aa20.47■□□□□ 0.87
SREBF1-213ENST00000485080 CCT2P78371 535 aaKnown RBP20.47■□□□□ 0.87
SREBF1-213ENST00000485080 TNFAIP2Q03169 654 aa20.47■□□□□ 0.87
SREBF1-213ENST00000485080 LRRC41Q15345 812 aa20.47■□□□□ 0.87
SREBF1-213ENST00000485080 STXBP2Q15833 593 aa20.47■□□□□ 0.87
SREBF1-213ENST00000485080 PKN1Q16512 942 aa20.47■□□□□ 0.87
SREBF1-213ENST00000485080 VSIG10LQ86VR7 867 aa20.47■□□□□ 0.87
SREBF1-213ENST00000485080 FBXO16Q8IX29 292 aaPredicted RBP20.47■□□□□ 0.87
SREBF1-213ENST00000485080 KLHDC9Q8NEP7 349 aa20.47■□□□□ 0.87
SREBF1-213ENST00000485080 CUL5Q93034 780 aa20.47■□□□□ 0.87
SREBF1-213ENST00000485080 UPF2Q9HAU5 1272 aaKnown RBP20.47■□□□□ 0.87
SREBF1-213ENST00000485080 NCOA5Q9HCD5 579 aaKnown RBP20.47■□□□□ 0.87
SREBF1-213ENST00000485080 GNEQ9Y223 722 aaKnown RBP20.47■□□□□ 0.87
SREBF1-213ENST00000485080 CST5P28325 142 aaPredicted RBP20.46■□□□□ 0.87
SREBF1-213ENST00000485080 GJA9P57773 515 aa20.46■□□□□ 0.87
SREBF1-213ENST00000485080 ANO1Q5XXA6 986 aa20.46■□□□□ 0.87
SREBF1-213ENST00000485080 TYW1BQ6NUM6 668 aa20.46■□□□□ 0.87
SREBF1-213ENST00000485080 CPLX2Q6PUV4 134 aaKnown RBP20.46■□□□□ 0.87
SREBF1-213ENST00000485080 RNF180Q86T96 592 aa20.46■□□□□ 0.87
SREBF1-213ENST00000485080 SCFD2Q8WU76 684 aa20.46■□□□□ 0.87
SREBF1-213ENST00000485080 GPKOWQ92917 476 aaPredicted RBP eCLIP20.46■□□□□ 0.87
SREBF1-213ENST00000485080 TSEN34Q9BSV6 310 aaKnown RBP20.46■□□□□ 0.87
SREBF1-213ENST00000485080 PDGFCQ9NRA1 345 aa20.46■□□□□ 0.87
SREBF1-213ENST00000485080 ESYT2A0FGR8 921 aa20.45■□□□□ 0.86
SREBF1-213ENST00000485080 EIF2AK2P19525 551 aaKnown RBP20.45■□□□□ 0.86
SREBF1-213ENST00000485080 ADCYAP1R1P41586 468 aa20.45■□□□□ 0.86
SREBF1-213ENST00000485080 AKAP17AQ02040 695 aaKnown RBP20.45■□□□□ 0.86
SREBF1-213ENST00000485080 DUSP28Q4G0W2 176 aa20.45■□□□□ 0.86
SREBF1-213ENST00000485080 XRRA1Q6P2D8 792 aa20.45■□□□□ 0.86
SREBF1-213ENST00000485080 USP17L6PQ6QN14 398 aa20.45■□□□□ 0.86
SREBF1-213ENST00000485080 FAM177A1Q8N128 213 aaPredicted RBP20.45■□□□□ 0.86
SREBF1-213ENST00000485080 DIS3LQ8TF46 1054 aaKnown RBP20.45■□□□□ 0.86
SREBF1-213ENST00000485080 PHKBQ93100 1093 aa20.45■□□□□ 0.86
SREBF1-213ENST00000485080 LARP6Q9BRS8 491 aaKnown RBP20.45■□□□□ 0.86
SREBF1-213ENST00000485080 C11orf49Q9H6J7 331 aa20.45■□□□□ 0.86
SREBF1-213ENST00000485080 RIC8AQ9NPQ8 531 aa20.45■□□□□ 0.86
SREBF1-213ENST00000485080 SYNRGQ9UMZ2 1314 aa20.45■□□□□ 0.86
SREBF1-213ENST00000485080 CPLX1O14810 134 aa20.44■□□□□ 0.86
SREBF1-213ENST00000485080 NKRFO15226 690 aaKnown RBP eCLIP20.44■□□□□ 0.862e-7■□□□□ 9.5
SREBF1-213ENST00000485080 STAM2O75886 525 aa20.44■□□□□ 0.86
SREBF1-213ENST00000485080 SMPD1P17405 629 aa20.44■□□□□ 0.86
SREBF1-213ENST00000485080 NAPAP54920 295 aa20.44■□□□□ 0.86
SREBF1-213ENST00000485080 SCRN1Q12765 414 aa20.44■□□□□ 0.86
SREBF1-213ENST00000485080 PGM5Q15124 567 aa20.44■□□□□ 0.86
SREBF1-213ENST00000485080 CCSAPQ6IQ19 270 aaPredicted RBP20.44■□□□□ 0.86
SREBF1-213ENST00000485080 CCDC62Q6P9F0 684 aa20.44■□□□□ 0.86
SREBF1-213ENST00000485080 EEPD1Q7L9B9 569 aa20.44■□□□□ 0.86
SREBF1-213ENST00000485080 FCHSD1Q86WN1 690 aa20.44■□□□□ 0.86
SREBF1-213ENST00000485080 TRIM22Q8IYM9 498 aa20.44■□□□□ 0.86
SREBF1-213ENST00000485080 SMARCC2Q8TAQ2 1214 aa20.44■□□□□ 0.86
SREBF1-213ENST00000485080 CCDC12Q8WUD4 166 aaPredicted RBP20.44■□□□□ 0.86
SREBF1-213ENST00000485080 HTATIP2Q9BUP3 242 aa20.44■□□□□ 0.86
SREBF1-213ENST00000485080 WDR11Q9BZH6 1224 aa20.44■□□□□ 0.86
SREBF1-213ENST00000485080 SLKQ9H2G2 1235 aaPredicted RBP20.44■□□□□ 0.86
SREBF1-213ENST00000485080 SPC25Q9HBM1 224 aa20.44■□□□□ 0.86
SREBF1-213ENST00000485080 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.43■□□□□ 0.86
SREBF1-213ENST00000485080 KBTBD13C9JR72 458 aa20.43■□□□□ 0.86
SREBF1-213ENST00000485080 CTAGE5O15320 804 aa20.43■□□□□ 0.86
SREBF1-213ENST00000485080 CDKL5O76039 1030 aa20.43■□□□□ 0.86
SREBF1-213ENST00000485080 PGK1P00558 417 aa20.43■□□□□ 0.86
SREBF1-213ENST00000485080 LENG1Q96BZ8 264 aaPredicted RBP20.43■□□□□ 0.86
SREBF1-213ENST00000485080 SLC26A6Q9BXS9 759 aa20.43■□□□□ 0.86
SREBF1-213ENST00000485080 BACH2Q9BYV9 841 aa20.43■□□□□ 0.86
SREBF1-213ENST00000485080 ZMYND12Q9H0C1 365 aa20.43■□□□□ 0.86
SREBF1-213ENST00000485080 SH3GLB2Q9NR46 395 aa20.43■□□□□ 0.86
SREBF1-213ENST00000485080 PHF24Q9UPV7 400 aa20.43■□□□□ 0.86
SREBF1-213ENST00000485080 DEXIO95424 95 aa20.42■□□□□ 0.86
SREBF1-213ENST00000485080 FOSP01100 380 aaPredicted RBP20.42■□□□□ 0.86
SREBF1-213ENST00000485080 CCND2P30279 289 aa20.42■□□□□ 0.86
SREBF1-213ENST00000485080 SSRP1Q08945 709 aaKnown RBP20.42■□□□□ 0.86
SREBF1-213ENST00000485080 TTLL4Q14679 1199 aa20.42■□□□□ 0.86
SREBF1-213ENST00000485080 ME3Q16798 604 aa20.42■□□□□ 0.86
SREBF1-213ENST00000485080 GJC2Q5T442 439 aaPredicted RBP20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms