RNA–Protein interactions for RNA: ENST00000484098.5

STRADB-208, Transcript of STE20-related kinase adaptor beta, humanhuman

TSL 3

Gene STRADB, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADB-208ENST00000484098 USP31Q70CQ4 1352 aa4.34□□□□□ -1.71
STRADB-208ENST00000484098 FAM86C2PA6NEL3 165 aa4.33□□□□□ -1.72
STRADB-208ENST00000484098 PPFIA2O75334 1257 aa4.33□□□□□ -1.72
STRADB-208ENST00000484098 HMGB1P09429 215 aaKnown RBP4.33□□□□□ -1.72
STRADB-208ENST00000484098 NME1P15531 152 aaKnown RBP4.33□□□□□ -1.72
STRADB-208ENST00000484098 GARTP22102 1010 aa4.33□□□□□ -1.72
STRADB-208ENST00000484098 EPHB4P54760 987 aa4.33□□□□□ -1.72
STRADB-208ENST00000484098 ITGA1P56199 1179 aa4.33□□□□□ -1.72
STRADB-208ENST00000484098 PPP2CBP62714 309 aa4.33□□□□□ -1.72
STRADB-208ENST00000484098 PPP2CAP67775 309 aa4.33□□□□□ -1.72
STRADB-208ENST00000484098 PSMD2Q13200 908 aa4.33□□□□□ -1.72
STRADB-208ENST00000484098 PRR31Q5SQ13 230 aa4.33□□□□□ -1.72
STRADB-208ENST00000484098 CD300LDQ6UXZ3 194 aa4.33□□□□□ -1.72
STRADB-208ENST00000484098 ZC3H18Q86VM9 953 aaKnown RBP4.33□□□□□ -1.72
STRADB-208ENST00000484098 FIBCD1Q8N539 461 aa4.33□□□□□ -1.72
STRADB-208ENST00000484098 RSRP1Q9BUV0 290 aa4.33□□□□□ -1.72
STRADB-208ENST00000484098 LRRC3Q9BY71 257 aa4.33□□□□□ -1.72
STRADB-208ENST00000484098 IKZF4Q9H2S9 585 aa4.33□□□□□ -1.72
STRADB-208ENST00000484098 SUCOQ9UBS9 1254 aaKnown RBP4.33□□□□□ -1.72
STRADB-208ENST00000484098 C9IYK1 514 aa4.32□□□□□ -1.72
STRADB-208ENST00000484098 TNFRSF10CO14798 259 aa4.32□□□□□ -1.72
STRADB-208ENST00000484098 CTSHP09668 335 aa4.32□□□□□ -1.72
STRADB-208ENST00000484098 FOXE3Q13461 319 aa4.32□□□□□ -1.72
STRADB-208ENST00000484098 TDRD10Q5VZ19 366 aaKnown RBP4.32□□□□□ -1.72
STRADB-208ENST00000484098 DNAJC10Q8IXB1 793 aa4.32□□□□□ -1.72
STRADB-208ENST00000484098 FAM26EQ8N5C1 309 aa4.32□□□□□ -1.72
STRADB-208ENST00000484098 NAF1Q96HR8 494 aaKnown RBP4.32□□□□□ -1.72
STRADB-208ENST00000484098 TRIM8Q9BZR9 551 aa4.32□□□□□ -1.72
STRADB-208ENST00000484098 EHMT1Q9H9B1 1298 aa4.32□□□□□ -1.72
STRADB-208ENST00000484098 SF3B6Q9Y3B4 125 aaKnown RBP4.32□□□□□ -1.72
STRADB-208ENST00000484098 SIT1Q9Y3P8 196 aa4.32□□□□□ -1.72
STRADB-208ENST00000484098 ROBO2Q9HCK4 1378 aa4.31□□□□□ -1.72
STRADB-208ENST00000484098 ERCC3P19447 782 aa4.31□□□□□ -1.72
STRADB-208ENST00000484098 ZNF445P59923 1031 aa4.31□□□□□ -1.72
STRADB-208ENST00000484098 POU4F1Q01851 419 aa4.31□□□□□ -1.72
STRADB-208ENST00000484098 DPTQ07507 201 aa4.31□□□□□ -1.72
STRADB-208ENST00000484098 HS1BP3Q53T59 392 aa4.31□□□□□ -1.72
STRADB-208ENST00000484098 MIIPQ5JXC2 388 aa4.31□□□□□ -1.72
STRADB-208ENST00000484098 DCAF15Q66K64 600 aa4.31□□□□□ -1.72
STRADB-208ENST00000484098 SLFN13Q68D06 897 aa4.31□□□□□ -1.72
STRADB-208ENST00000484098 IGFL4Q6B9Z1 124 aa4.31□□□□□ -1.72
STRADB-208ENST00000484098 RNF207Q6ZRF8 634 aa4.31□□□□□ -1.72
STRADB-208ENST00000484098 GK5Q6ZS86 529 aa4.31□□□□□ -1.72
STRADB-208ENST00000484098 Q8TCH9 128 aa4.31□□□□□ -1.72
STRADB-208ENST00000484098 DHRS1Q96LJ7 313 aa4.31□□□□□ -1.72
STRADB-208ENST00000484098 ZDHHC15Q96MV8 337 aa4.31□□□□□ -1.72
STRADB-208ENST00000484098 PTPN18Q99952 460 aa4.31□□□□□ -1.72
STRADB-208ENST00000484098 CSRNP2Q9H175 543 aa4.31□□□□□ -1.72
STRADB-208ENST00000484098 L2HGDHQ9H9P8 463 aa4.31□□□□□ -1.72
STRADB-208ENST00000484098 GULP1Q9UBP9 304 aa4.31□□□□□ -1.72
STRADB-208ENST00000484098 PARP2Q9UGN5 583 aa4.31□□□□□ -1.72
STRADB-208ENST00000484098 ZFR2Q9UPR6 939 aaKnown RBP4.31□□□□□ -1.72
STRADB-208ENST00000484098 FHOD1Q9Y613 1164 aa4.31□□□□□ -1.72
STRADB-208ENST00000484098 ZNF28P17035 718 aa4.3□□□□□ -1.72
STRADB-208ENST00000484098 LMO1P25800 156 aa4.3□□□□□ -1.72
STRADB-208ENST00000484098 MCM7P33993 719 aa4.3□□□□□ -1.72
STRADB-208ENST00000484098 LRRFIP1Q32MZ4 808 aaKnown RBP4.3□□□□□ -1.72
STRADB-208ENST00000484098 NRN1LQ496H8 165 aa4.3□□□□□ -1.72
STRADB-208ENST00000484098 EAPPQ56P03 285 aaPredicted RBP4.3□□□□□ -1.72
STRADB-208ENST00000484098 EEF1DP3Q658K8 133 aa4.3□□□□□ -1.72
STRADB-208ENST00000484098 FBXL19Q6PCT2 694 aa4.3□□□□□ -1.72
STRADB-208ENST00000484098 DCP2Q8IU60 420 aaKnown RBP4.3□□□□□ -1.72
STRADB-208ENST00000484098 KBTBD2Q8IY47 623 aa4.3□□□□□ -1.72
STRADB-208ENST00000484098 MBD6Q96DN6 1003 aa4.3□□□□□ -1.72
STRADB-208ENST00000484098 CRAMP1Q96RY5 1269 aa4.3□□□□□ -1.72
STRADB-208ENST00000484098 SLC9A7Q96T83 725 aa4.3□□□□□ -1.72
STRADB-208ENST00000484098 MTA3Q9BTC8 594 aa4.3□□□□□ -1.72
STRADB-208ENST00000484098 TMEM168Q9H0V1 697 aa4.3□□□□□ -1.72
STRADB-208ENST00000484098 NOL6Q9H6R4 1146 aaKnown RBP4.3□□□□□ -1.72
STRADB-208ENST00000484098 GP6Q9HCN6 339 aa4.3□□□□□ -1.72
STRADB-208ENST00000484098 SUPT16HQ9Y5B9 1047 aaKnown RBP4.3□□□□□ -1.72
STRADB-208ENST00000484098 A0A087X1B8 175 aa4.29□□□□□ -1.72
STRADB-208ENST00000484098 MEIS3P2A8K0S8 358 aa4.29□□□□□ -1.72
STRADB-208ENST00000484098 NTRK1P04629 796 aa4.29□□□□□ -1.72
STRADB-208ENST00000484098 CLCQ05315 142 aa4.29□□□□□ -1.72
STRADB-208ENST00000484098 PRKD1Q15139 912 aaPredicted RBP4.29□□□□□ -1.72
STRADB-208ENST00000484098 RCSD1Q6JBY9 416 aa4.29□□□□□ -1.72
STRADB-208ENST00000484098 PKN3Q6P5Z2 889 aa4.29□□□□□ -1.72
STRADB-208ENST00000484098 MIB1Q86YT6 1006 aa4.29□□□□□ -1.72
STRADB-208ENST00000484098 AMER2Q8N7J2 671 aa4.29□□□□□ -1.72
STRADB-208ENST00000484098 AP5M1Q9H0R1 490 aa4.29□□□□□ -1.72
STRADB-208ENST00000484098 KBTBD4Q9NVX7 518 aa4.29□□□□□ -1.72
STRADB-208ENST00000484098 USP35Q9P2H5 1018 aa4.29□□□□□ -1.72
STRADB-208ENST00000484098 B4GALT4O60513 344 aa4.28□□□□□ -1.72
STRADB-208ENST00000484098 ITGA4P13612 1032 aa4.28□□□□□ -1.72
STRADB-208ENST00000484098 MCM4P33991 863 aa4.28□□□□□ -1.72
STRADB-208ENST00000484098 CRKP46108 304 aa4.28□□□□□ -1.72
STRADB-208ENST00000484098 PMS1P54277 932 aaKnown RBP4.28□□□□□ -1.72
STRADB-208ENST00000484098 INHBCP55103 352 aa4.28□□□□□ -1.72
STRADB-208ENST00000484098 DAB2P98082 770 aa4.28□□□□□ -1.72
STRADB-208ENST00000484098 SEZ6Q53EL9 994 aa4.28□□□□□ -1.72
STRADB-208ENST00000484098 SMARCC1Q92922 1105 aaPredicted RBP4.28□□□□□ -1.72
STRADB-208ENST00000484098 ZNF503Q96F45 646 aa4.28□□□□□ -1.72
STRADB-208ENST00000484098 YTHDC1Q96MU7 727 aaKnown RBP4.28□□□□□ -1.72
STRADB-208ENST00000484098 MEGF9Q9H1U4 602 aa4.28□□□□□ -1.72
STRADB-208ENST00000484098 STXBP3O00186 592 aa4.27□□□□□ -1.73
STRADB-208ENST00000484098 PPP1R11O60927 126 aaPredicted RBP4.27□□□□□ -1.73
STRADB-208ENST00000484098 FUCA1P04066 466 aa4.27□□□□□ -1.73
STRADB-208ENST00000484098 STAT5AP42229 794 aa4.27□□□□□ -1.73
STRADB-208ENST00000484098 ATXN1P54253 815 aaKnown RBP4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms