RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 RNF225M0QZC1 329 aaPredicted RBP12.8□□□□□ -0.36
SEC61A1-205ENST00000483956 UPP2O95045 317 aa12.8□□□□□ -0.36
SEC61A1-205ENST00000483956 FESP07332 822 aa12.8□□□□□ -0.36
SEC61A1-205ENST00000483956 CDC25AP30304 524 aa12.8□□□□□ -0.36
SEC61A1-205ENST00000483956 MDH1P40925 334 aaKnown RBP12.8□□□□□ -0.36
SEC61A1-205ENST00000483956 SLC7A5Q01650 507 aa12.8□□□□□ -0.36
SEC61A1-205ENST00000483956 NPY5RQ15761 445 aa12.8□□□□□ -0.36
SEC61A1-205ENST00000483956 TTC38Q5R3I4 469 aa12.8□□□□□ -0.36
SEC61A1-205ENST00000483956 C1QTNF12Q5T7M4 302 aa12.8□□□□□ -0.36
SEC61A1-205ENST00000483956 ZNF662Q6ZS27 426 aa12.8□□□□□ -0.36
SEC61A1-205ENST00000483956 TRIM58Q8NG06 486 aa12.8□□□□□ -0.36
SEC61A1-205ENST00000483956 CORO1CQ9ULV4 474 aaPredicted RBP12.8□□□□□ -0.36
SEC61A1-205ENST00000483956 REXO2Q9Y3B8 237 aaKnown RBP12.8□□□□□ -0.36
SEC61A1-205ENST00000483956 KCNJ18B7U540 433 aa12.8□□□□□ -0.36
SEC61A1-205ENST00000483956 NDUFA10O95299 355 aa12.8□□□□□ -0.36
SEC61A1-205ENST00000483956 FAM163BP0C2L3 166 aa12.8□□□□□ -0.36
SEC61A1-205ENST00000483956 LINGO3P0C6S8 592 aa12.8□□□□□ -0.36
SEC61A1-205ENST00000483956 KRT9P35527 623 aa12.8□□□□□ -0.36
SEC61A1-205ENST00000483956 LAMB3Q13751 1172 aa12.8□□□□□ -0.36
SEC61A1-205ENST00000483956 KCNJ12Q14500 433 aa12.8□□□□□ -0.36
SEC61A1-205ENST00000483956 RRAGBQ5VZM2 374 aa12.8□□□□□ -0.36
SEC61A1-205ENST00000483956 PAPD7Q5XG87 772 aaKnown RBP12.8□□□□□ -0.36
SEC61A1-205ENST00000483956 TCP11Q8WWU5 503 aa12.8□□□□□ -0.36
SEC61A1-205ENST00000483956 LRRC1Q9BTT6 524 aa12.8□□□□□ -0.36
SEC61A1-205ENST00000483956 PRDM11Q9NQV5 511 aa12.8□□□□□ -0.36
SEC61A1-205ENST00000483956 RMND1Q9NWS8 449 aa12.8□□□□□ -0.36
SEC61A1-205ENST00000483956 EPN1Q9Y6I3 576 aaPredicted RBP12.8□□□□□ -0.36
SEC61A1-205ENST00000483956 WNT7AO00755 349 aa12.79□□□□□ -0.36
SEC61A1-205ENST00000483956 AHCYL1O43865 530 aa12.79□□□□□ -0.36
SEC61A1-205ENST00000483956 MYBL1P10243 752 aa12.79□□□□□ -0.36
SEC61A1-205ENST00000483956 TRAPPC10P48553 1259 aa12.79□□□□□ -0.36
SEC61A1-205ENST00000483956 QPCTQ16769 361 aa12.79□□□□□ -0.36
SEC61A1-205ENST00000483956 ZNF658Q5TYW1 1059 aaPredicted RBP12.79□□□□□ -0.36
SEC61A1-205ENST00000483956 MSL1Q68DK7 614 aa12.79□□□□□ -0.36
SEC61A1-205ENST00000483956 HIBCHQ6NVY1 386 aaPredicted RBP12.79□□□□□ -0.36
SEC61A1-205ENST00000483956 EZH1Q92800 747 aaPredicted RBP12.79□□□□□ -0.36
SEC61A1-205ENST00000483956 DNAJC7Q99615 494 aa12.79□□□□□ -0.36
SEC61A1-205ENST00000483956 HAUS4Q9H6D7 363 aa12.79□□□□□ -0.36
SEC61A1-205ENST00000483956 STRCP1A6NGW2 1772 aa12.79□□□□□ -0.36
SEC61A1-205ENST00000483956 RREB1Q92766 1687 aa12.79□□□□□ -0.36
SEC61A1-205ENST00000483956 CWF19L1Q69YN2 538 aaKnown RBP12.79□□□□□ -0.36
SEC61A1-205ENST00000483956 ENAHQ8N8S7 591 aaPredicted RBP12.79□□□□□ -0.36
SEC61A1-205ENST00000483956 VPS16Q9H269 839 aa12.79□□□□□ -0.36
SEC61A1-205ENST00000483956 A0A1W2PQC6 194 aa12.78□□□□□ -0.36
SEC61A1-205ENST00000483956 ZNF233A6NK53 670 aa12.78□□□□□ -0.36
SEC61A1-205ENST00000483956 EIF4E1BA6NMX2 242 aaKnown RBP12.78□□□□□ -0.36
SEC61A1-205ENST00000483956 BACH1O14867 736 aa12.78□□□□□ -0.36
SEC61A1-205ENST00000483956 CALM1P0DP23 149 aa12.78□□□□□ -0.36
SEC61A1-205ENST00000483956 CALM2P0DP24 149 aa12.78□□□□□ -0.36
SEC61A1-205ENST00000483956 CALM3P0DP25 149 aa12.78□□□□□ -0.36
SEC61A1-205ENST00000483956 USP4Q13107 963 aa12.78□□□□□ -0.36
SEC61A1-205ENST00000483956 PTGDRQ13258 359 aa12.78□□□□□ -0.36
SEC61A1-205ENST00000483956 CADPS2Q86UW7 1296 aa12.78□□□□□ -0.36
SEC61A1-205ENST00000483956 HELBQ8NG08 1087 aaPredicted RBP12.78□□□□□ -0.36
SEC61A1-205ENST00000483956 NELFBQ8WX92 580 aa12.78□□□□□ -0.36
SEC61A1-205ENST00000483956 TAB2Q9NYJ8 693 aa12.78□□□□□ -0.36
SEC61A1-205ENST00000483956 ASAP1Q9ULH1 1129 aa12.78□□□□□ -0.36
SEC61A1-205ENST00000483956 ITGB4P16144 1822 aa12.78□□□□□ -0.36
SEC61A1-205ENST00000483956 ERVV-1B6SEH8 477 aa12.78□□□□□ -0.36
SEC61A1-205ENST00000483956 PES1O00541 588 aaKnown RBP12.78□□□□□ -0.36
SEC61A1-205ENST00000483956 PYGBP11216 843 aa12.78□□□□□ -0.36
SEC61A1-205ENST00000483956 RANBP1P43487 201 aa12.78□□□□□ -0.36
SEC61A1-205ENST00000483956 PAPOLAP51003 745 aaKnown RBP12.78□□□□□ -0.36
SEC61A1-205ENST00000483956 GNPTABQ3T906 1256 aa12.78□□□□□ -0.36
SEC61A1-205ENST00000483956 EHBP1Q8NDI1 1231 aa12.78□□□□□ -0.36
SEC61A1-205ENST00000483956 B4GALNT2Q8NHY0 566 aa12.78□□□□□ -0.36
SEC61A1-205ENST00000483956 ZSCAN10Q96SZ4 725 aaPredicted RBP12.78□□□□□ -0.36
SEC61A1-205ENST00000483956 CHP1Q99653 195 aa12.78□□□□□ -0.36
SEC61A1-205ENST00000483956 MTRQ99707 1265 aa12.78□□□□□ -0.36
SEC61A1-205ENST00000483956 ZCWPW1Q9H0M4 648 aa12.78□□□□□ -0.36
SEC61A1-205ENST00000483956 SPDYE3A6NKU9 549 aa12.78□□□□□ -0.36
SEC61A1-205ENST00000483956 H7C1D1 291 aa12.78□□□□□ -0.36
SEC61A1-205ENST00000483956 NEFHP12036 1026 aa12.78□□□□□ -0.36
SEC61A1-205ENST00000483956 EPHB4P54760 987 aa12.78□□□□□ -0.36
SEC61A1-205ENST00000483956 PPP1R7Q15435 360 aa12.78□□□□□ -0.36
SEC61A1-205ENST00000483956 ZNF174Q15697 407 aa12.78□□□□□ -0.36
SEC61A1-205ENST00000483956 CCDC70Q6NSX1 233 aa12.78□□□□□ -0.36
SEC61A1-205ENST00000483956 CATIPQ7Z7H3 387 aa12.78□□□□□ -0.36
SEC61A1-205ENST00000483956 PIGBQ92521 554 aa12.78□□□□□ -0.36
SEC61A1-205ENST00000483956 LEMD3Q9Y2U8 911 aa12.78□□□□□ -0.36
SEC61A1-205ENST00000483956 PRDM1O75626 825 aa12.77□□□□□ -0.36
SEC61A1-205ENST00000483956 DDAH1O94760 285 aa12.77□□□□□ -0.36
SEC61A1-205ENST00000483956 PCP11498 1178 aaKnown RBP12.77□□□□□ -0.36
SEC61A1-205ENST00000483956 HVCN1Q96D96 273 aa12.77□□□□□ -0.36
SEC61A1-205ENST00000483956 CCDC43Q96MW1 224 aaKnown RBP12.77□□□□□ -0.36
SEC61A1-205ENST00000483956 OSBPL9Q96SU4 736 aa12.77□□□□□ -0.36
SEC61A1-205ENST00000483956 BLZF1Q9H2G9 400 aa12.77□□□□□ -0.36
SEC61A1-205ENST00000483956 PAPOLBQ9NRJ5 636 aaKnown RBP12.77□□□□□ -0.36
SEC61A1-205ENST00000483956 CHCHD3Q9NX63 227 aaKnown RBP12.77□□□□□ -0.36
SEC61A1-205ENST00000483956 V9GY48 417 aaPredicted RBP12.77□□□□□ -0.36
SEC61A1-205ENST00000483956 SLIT2O94813 1529 aa12.77□□□□□ -0.37
SEC61A1-205ENST00000483956 LGALS16A8MUM7 142 aa12.77□□□□□ -0.37
SEC61A1-205ENST00000483956 PLEKHA8P1O95397 391 aa12.77□□□□□ -0.37
SEC61A1-205ENST00000483956 GNAT1P11488 350 aa12.77□□□□□ -0.37
SEC61A1-205ENST00000483956 HPDP32754 393 aaPredicted RBP12.77□□□□□ -0.37
SEC61A1-205ENST00000483956 MATR3P43243 847 aaKnown RBP eCLIP12.77□□□□□ -0.37
SEC61A1-205ENST00000483956 UBXN1Q04323 297 aa12.77□□□□□ -0.37
SEC61A1-205ENST00000483956 TROAPQ12815 778 aa12.77□□□□□ -0.37
SEC61A1-205ENST00000483956 TMTC3Q6ZXV5 915 aa12.77□□□□□ -0.37
SEC61A1-205ENST00000483956 EPAS1Q99814 870 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms