RNA–Protein interactions for RNA: ENST00000483941.1

SMAD9-204, Transcript of SMAD family member 9, humanhuman

TSL 3

Gene SMAD9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-204ENST00000483941 TEX13BQ9BXU2 312 aa15.92■□□□□ 0.14
SMAD9-204ENST00000483941 RNF208Q9H0X6 261 aa15.92■□□□□ 0.14
SMAD9-204ENST00000483941 TFIP11Q9UBB9 837 aaKnown RBP15.92■□□□□ 0.14
SMAD9-204ENST00000483941 ADGRA2Q96PE1 1338 aa15.92■□□□□ 0.14
SMAD9-204ENST00000483941 PHIPQ8WWQ0 1821 aa15.91■□□□□ 0.14
SMAD9-204ENST00000483941 LAD1O00515 517 aa15.91■□□□□ 0.14
SMAD9-204ENST00000483941 PPP6R2O75170 966 aa15.91■□□□□ 0.14
SMAD9-204ENST00000483941 SNAP25P60880 206 aa15.91■□□□□ 0.14
SMAD9-204ENST00000483941 UBE2HP62256 183 aa15.91■□□□□ 0.14
SMAD9-204ENST00000483941 UBXN2AP68543 259 aa15.91■□□□□ 0.14
SMAD9-204ENST00000483941 SLC39A14Q15043 492 aa15.91■□□□□ 0.14
SMAD9-204ENST00000483941 TTC38Q5R3I4 469 aa15.91■□□□□ 0.14
SMAD9-204ENST00000483941 FAM173BQ6P4H8 233 aa15.91■□□□□ 0.14
SMAD9-204ENST00000483941 ANKRD23Q86SG2 305 aa15.91■□□□□ 0.14
SMAD9-204ENST00000483941 CPXCR1Q8N123 301 aa15.91■□□□□ 0.14
SMAD9-204ENST00000483941 LEO1Q8WVC0 666 aaPredicted RBP15.91■□□□□ 0.14
SMAD9-204ENST00000483941 USP28Q96RU2 1077 aa15.91■□□□□ 0.14
SMAD9-204ENST00000483941 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.91■□□□□ 0.14
SMAD9-204ENST00000483941 BIN2Q9UBW5 565 aaPredicted RBP15.91■□□□□ 0.14
SMAD9-204ENST00000483941 FBXO40Q9UH90 709 aa15.91■□□□□ 0.14
SMAD9-204ENST00000483941 SPDYE16A6NNV3 312 aaPredicted RBP15.9■□□□□ 0.14
SMAD9-204ENST00000483941 PDHXO00330 501 aa15.9■□□□□ 0.14
SMAD9-204ENST00000483941 SPTLC2O15270 562 aa15.9■□□□□ 0.14
SMAD9-204ENST00000483941 ALAS1P13196 640 aa15.9■□□□□ 0.14
SMAD9-204ENST00000483941 STAT3P40763 770 aa15.9■□□□□ 0.14
SMAD9-204ENST00000483941 CLK2P49760 499 aaKnown RBP15.9■□□□□ 0.14
SMAD9-204ENST00000483941 USP11P51784 963 aa15.9■□□□□ 0.14
SMAD9-204ENST00000483941 TREML2Q5T2D2 321 aa15.9■□□□□ 0.14
SMAD9-204ENST00000483941 NEK8Q86SG6 692 aa15.9■□□□□ 0.14
SMAD9-204ENST00000483941 LINC00301Q8NCQ3 95 aa15.9■□□□□ 0.14
SMAD9-204ENST00000483941 CHST13Q8NET6 341 aa15.9■□□□□ 0.14
SMAD9-204ENST00000483941 ASCC2Q9H1I8 757 aaPredicted RBP15.9■□□□□ 0.14
SMAD9-204ENST00000483941 RAVER2Q9HCJ3 691 aaKnown RBP15.9■□□□□ 0.14
SMAD9-204ENST00000483941 ZNF536O15090 1300 aa15.9■□□□□ 0.14
SMAD9-204ENST00000483941 SOX1O00570 391 aaPredicted RBP15.89■□□□□ 0.13
SMAD9-204ENST00000483941 SLC25A27O95847 323 aa15.89■□□□□ 0.13
SMAD9-204ENST00000483941 GCFC2P16383 781 aaKnown RBP15.89■□□□□ 0.13
SMAD9-204ENST00000483941 GCLCP48506 637 aaPredicted RBP15.89■□□□□ 0.13
SMAD9-204ENST00000483941 HERVK_113P62684 666 aa15.89■□□□□ 0.13
SMAD9-204ENST00000483941 GHRHRQ02643 423 aa15.89■□□□□ 0.13
SMAD9-204ENST00000483941 CEBPZQ03701 1054 aaKnown RBP15.89■□□□□ 0.13
SMAD9-204ENST00000483941 JAKMIP3Q5VZ66 844 aa15.89■□□□□ 0.13
SMAD9-204ENST00000483941 SLAIN1Q8ND83 568 aa15.89■□□□□ 0.13
SMAD9-204ENST00000483941 U2AF1L4Q8WU68 220 aaKnown RBP15.89■□□□□ 0.13
SMAD9-204ENST00000483941 AGBL1Q96MI9 1066 aa15.89■□□□□ 0.13
SMAD9-204ENST00000483941 TRERF1Q96PN7 1200 aa15.89■□□□□ 0.13
SMAD9-204ENST00000483941 LMBRD1Q9NUN5 540 aa15.89■□□□□ 0.13
SMAD9-204ENST00000483941 MEIS2O14770 477 aa15.88■□□□□ 0.13
SMAD9-204ENST00000483941 CFBP00751 764 aa15.88■□□□□ 0.13
SMAD9-204ENST00000483941 ATP2B1P20020 1258 aa15.88■□□□□ 0.13
SMAD9-204ENST00000483941 ME1P48163 572 aa15.88■□□□□ 0.13
SMAD9-204ENST00000483941 TOB1P50616 345 aaPredicted RBP15.88■□□□□ 0.13
SMAD9-204ENST00000483941 CCNA1P78396 465 aa15.88■□□□□ 0.13
SMAD9-204ENST00000483941 PRKCZQ05513 592 aa15.88■□□□□ 0.13
SMAD9-204ENST00000483941 MOGSQ13724 837 aa15.88■□□□□ 0.13
SMAD9-204ENST00000483941 SNRNP48Q6IEG0 339 aaKnown RBP15.88■□□□□ 0.13
SMAD9-204ENST00000483941 GPAT2Q6NUI2 795 aa15.88■□□□□ 0.13
SMAD9-204ENST00000483941 MOXD1Q6UVY6 613 aa15.88■□□□□ 0.13
SMAD9-204ENST00000483941 REPS2Q8NFH8 660 aa15.88■□□□□ 0.13
SMAD9-204ENST00000483941 TBCKQ8TEA7 893 aa15.88■□□□□ 0.13
SMAD9-204ENST00000483941 SMCR8Q8TEV9 937 aaPredicted RBP15.88■□□□□ 0.13
SMAD9-204ENST00000483941 FERMT2Q96AC1 680 aa15.88■□□□□ 0.13
SMAD9-204ENST00000483941 LRCH3Q96II8 777 aa15.88■□□□□ 0.13
SMAD9-204ENST00000483941 PARK7Q99497 189 aaKnown RBP15.88■□□□□ 0.13
SMAD9-204ENST00000483941 P2RX7Q99572 595 aaKnown RBP15.88■□□□□ 0.13
SMAD9-204ENST00000483941 ACAD9Q9H845 621 aa15.88■□□□□ 0.13
SMAD9-204ENST00000483941 CLIC4Q9Y696 253 aa15.88■□□□□ 0.13
SMAD9-204ENST00000483941 EVI5O60447 810 aa15.87■□□□□ 0.13
SMAD9-204ENST00000483941 MNX1P50219 401 aaPredicted RBP15.87■□□□□ 0.13
SMAD9-204ENST00000483941 HSD17B4P51659 736 aa15.87■□□□□ 0.13
SMAD9-204ENST00000483941 FCGRTP55899 365 aa15.87■□□□□ 0.13
SMAD9-204ENST00000483941 PLS1Q14651 629 aa15.87■□□□□ 0.13
SMAD9-204ENST00000483941 TMEM132BQ14DG7 1078 aa15.87■□□□□ 0.13
SMAD9-204ENST00000483941 INF2Q27J81 1249 aa15.87■□□□□ 0.13
SMAD9-204ENST00000483941 ARL6IP4Q66PJ3 421 aaKnown RBP15.87■□□□□ 0.13
SMAD9-204ENST00000483941 ADALQ6DHV7 355 aa15.87■□□□□ 0.13
SMAD9-204ENST00000483941 PPP4R3AQ6IN85 833 aa15.87■□□□□ 0.13
SMAD9-204ENST00000483941 RIOX2Q8IUF8 465 aa15.87■□□□□ 0.13
SMAD9-204ENST00000483941 KRI1Q8N9T8 703 aaKnown RBP15.87■□□□□ 0.13
SMAD9-204ENST00000483941 RASGRP4Q8TDF6 673 aa15.87■□□□□ 0.13
SMAD9-204ENST00000483941 SYAP1Q96A49 352 aaPredicted RBP15.87■□□□□ 0.13
SMAD9-204ENST00000483941 ANO3Q9BYT9 981 aa15.87■□□□□ 0.13
SMAD9-204ENST00000483941 UNC93B1Q9H1C4 597 aa15.87■□□□□ 0.13
SMAD9-204ENST00000483941 RNF146Q9NTX7 359 aa15.87■□□□□ 0.13
SMAD9-204ENST00000483941 ZNF214Q9UL59 606 aaPredicted RBP15.87■□□□□ 0.13
SMAD9-204ENST00000483941 DDX49Q9Y6V7 483 aaKnown RBP15.87■□□□□ 0.13
SMAD9-204ENST00000483941 PTPRFP10586 1907 aa15.87■□□□□ 0.13
SMAD9-204ENST00000483941 LAMA2P24043 3122 aaKnown RBP15.86■□□□□ 0.13
SMAD9-204ENST00000483941 LOC285556D6RIA3 1793 aa15.86■□□□□ 0.13
SMAD9-204ENST00000483941 CUTAO60888 179 aa15.86■□□□□ 0.13
SMAD9-204ENST00000483941 UBE2SQ16763 222 aa15.86■□□□□ 0.13
SMAD9-204ENST00000483941 LETM2Q2VYF4 491 aa15.86■□□□□ 0.13
SMAD9-204ENST00000483941 USP17L6PQ6QN14 398 aa15.86■□□□□ 0.13
SMAD9-204ENST00000483941 RNF207Q6ZRF8 634 aa15.86■□□□□ 0.13
SMAD9-204ENST00000483941 SPATC1LQ9H0A9 340 aa15.86■□□□□ 0.13
SMAD9-204ENST00000483941 GDPD2Q9HCC8 539 aa15.86■□□□□ 0.13
SMAD9-204ENST00000483941 PCDHB6Q9Y5E3 794 aa15.86■□□□□ 0.13
SMAD9-204ENST00000483941 PFASO15067 1338 aa15.86■□□□□ 0.13
SMAD9-204ENST00000483941 A0A1W2PQ27 194 aa15.85■□□□□ 0.13
SMAD9-204ENST00000483941 A0A1W2PQ64 194 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms