RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 INCENPQ9NQS7 918 aa12.9□□□□□ -0.34
SMARCC1-205ENST00000483847 IL17RBQ9NRM6 502 aa12.9□□□□□ -0.34
SMARCC1-205ENST00000483847 ADD3Q9UEY8 706 aaKnown RBP12.9□□□□□ -0.34
SMARCC1-205ENST00000483847 STX8Q9UNK0 236 aa12.9□□□□□ -0.34
SMARCC1-205ENST00000483847 MTMR7Q9Y216 660 aa12.9□□□□□ -0.34
SMARCC1-205ENST00000483847 SIP14410 1827 aa12.9□□□□□ -0.34
SMARCC1-205ENST00000483847 PATL2C9JE40 543 aaKnown RBP12.89□□□□□ -0.35
SMARCC1-205ENST00000483847 SSTR3P32745 418 aaPredicted RBP12.89□□□□□ -0.35
SMARCC1-205ENST00000483847 SLC16A2P36021 539 aa12.89□□□□□ -0.35
SMARCC1-205ENST00000483847 PTPN11Q06124 597 aaPredicted RBP12.89□□□□□ -0.35
SMARCC1-205ENST00000483847 PDE4BQ07343 736 aa12.89□□□□□ -0.35
SMARCC1-205ENST00000483847 PTGISQ16647 500 aa12.89□□□□□ -0.35
SMARCC1-205ENST00000483847 LEXMQ3ZCV2 418 aa12.89□□□□□ -0.35
SMARCC1-205ENST00000483847 TTBK2Q6IQ55 1244 aa12.89□□□□□ -0.35
SMARCC1-205ENST00000483847 ECHDC1Q9NTX5 307 aa12.89□□□□□ -0.35
SMARCC1-205ENST00000483847 NOD1Q9Y239 953 aa12.89□□□□□ -0.35
SMARCC1-205ENST00000483847 TRIOO75962 3097 aa12.89□□□□□ -0.35
SMARCC1-205ENST00000483847 PTPDC1A2A3K4 754 aa12.88□□□□□ -0.35
SMARCC1-205ENST00000483847 LINC01553A4QN01 128 aa12.88□□□□□ -0.35
SMARCC1-205ENST00000483847 ARIH2O95376 493 aa12.88□□□□□ -0.35
SMARCC1-205ENST00000483847 GJB5O95377 273 aa12.88□□□□□ -0.35
SMARCC1-205ENST00000483847 GNAT2P19087 354 aa12.88□□□□□ -0.35
SMARCC1-205ENST00000483847 CALML3P27482 149 aa12.88□□□□□ -0.35
SMARCC1-205ENST00000483847 ERVK-21P61565 698 aa12.88□□□□□ -0.35
SMARCC1-205ENST00000483847 PPARAQ07869 468 aa12.88□□□□□ -0.35
SMARCC1-205ENST00000483847 PPP2R5BQ15173 497 aa12.88□□□□□ -0.35
SMARCC1-205ENST00000483847 GDF6Q6KF10 455 aaPredicted RBP12.88□□□□□ -0.35
SMARCC1-205ENST00000483847 AFAP1L1Q8TED9 768 aa12.88□□□□□ -0.35
SMARCC1-205ENST00000483847 CLEC4DQ8WXI8 215 aa12.88□□□□□ -0.35
SMARCC1-205ENST00000483847 DHX38Q92620 1227 aaKnown RBP12.88□□□□□ -0.35
SMARCC1-205ENST00000483847 LRRCC1Q9C099 1032 aa12.88□□□□□ -0.35
SMARCC1-205ENST00000483847 RANBP17Q9H2T7 1088 aaKnown RBP12.88□□□□□ -0.35
SMARCC1-205ENST00000483847 KPNA6O60684 536 aa12.87□□□□□ -0.35
SMARCC1-205ENST00000483847 NBNO60934 754 aa12.87□□□□□ -0.35
SMARCC1-205ENST00000483847 SELPP16109 830 aa12.87□□□□□ -0.35
SMARCC1-205ENST00000483847 NHLH1Q02575 133 aa12.87□□□□□ -0.35
SMARCC1-205ENST00000483847 PDE4DQ08499 809 aa12.87□□□□□ -0.35
SMARCC1-205ENST00000483847 CCDC96Q2M329 555 aa12.87□□□□□ -0.35
SMARCC1-205ENST00000483847 LRRFIP1Q32MZ4 808 aaKnown RBP12.87□□□□□ -0.35
SMARCC1-205ENST00000483847 BRDTQ58F21 947 aaPredicted RBP12.87□□□□□ -0.35
SMARCC1-205ENST00000483847 PTCRAQ6ISU1 281 aaPredicted RBP12.87□□□□□ -0.35
SMARCC1-205ENST00000483847 FAM117BQ6P1L5 589 aa12.87□□□□□ -0.35
SMARCC1-205ENST00000483847 CNKSR3Q6P9H4 555 aa12.87□□□□□ -0.35
SMARCC1-205ENST00000483847 LRRC8DQ7L1W4 858 aa12.87□□□□□ -0.35
SMARCC1-205ENST00000483847 SCFD2Q8WU76 684 aa12.87□□□□□ -0.35
SMARCC1-205ENST00000483847 ANKS1AQ92625 1134 aa12.87□□□□□ -0.35
SMARCC1-205ENST00000483847 TGS1Q96RS0 853 aaKnown RBP12.87□□□□□ -0.35
SMARCC1-205ENST00000483847 RAD9AQ99638 391 aa12.87□□□□□ -0.35
SMARCC1-205ENST00000483847 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.87□□□□□ -0.35
SMARCC1-205ENST00000483847 RAD50Q92878 1312 aa12.87□□□□□ -0.35
SMARCC1-205ENST00000483847 LOC102724159A0A0B4J2E5 919 aa12.86□□□□□ -0.35
SMARCC1-205ENST00000483847 GRXCR2A6NFK2 248 aa12.86□□□□□ -0.35
SMARCC1-205ENST00000483847 NKRFO15226 690 aaKnown RBP eCLIP12.86□□□□□ -0.35
SMARCC1-205ENST00000483847 CXCL10P02778 98 aa12.86□□□□□ -0.35
SMARCC1-205ENST00000483847 ZFYP08048 801 aaPredicted RBP12.86□□□□□ -0.35
SMARCC1-205ENST00000483847 TXNP10599 105 aaKnown RBP12.86□□□□□ -0.35
SMARCC1-205ENST00000483847 ALADP13716 330 aa12.86□□□□□ -0.35
SMARCC1-205ENST00000483847 EDNRBP24530 442 aa12.86□□□□□ -0.35
SMARCC1-205ENST00000483847 CTDSPL2Q05D32 466 aa12.86□□□□□ -0.35
SMARCC1-205ENST00000483847 PWP2Q15269 919 aaKnown RBP12.86□□□□□ -0.35
SMARCC1-205ENST00000483847 CAGE1Q8TC20 777 aa12.86□□□□□ -0.35
SMARCC1-205ENST00000483847 FBXL18Q96ME1 805 aa12.86□□□□□ -0.35
SMARCC1-205ENST00000483847 C17orf80Q9BSJ5 609 aa12.86□□□□□ -0.35
SMARCC1-205ENST00000483847 NAPBQ9H115 298 aa12.86□□□□□ -0.35
SMARCC1-205ENST00000483847 DDX19BQ9UMR2 479 aa12.86□□□□□ -0.35
SMARCC1-205ENST00000483847 TSPY2A6NKD2 308 aa12.85□□□□□ -0.35
SMARCC1-205ENST00000483847 H3BQ06 376 aaPredicted RBP12.85□□□□□ -0.35
SMARCC1-205ENST00000483847 FOXP2O15409 715 aa12.85□□□□□ -0.35
SMARCC1-205ENST00000483847 SLC3A2P08195 630 aaKnown RBP12.85□□□□□ -0.35
SMARCC1-205ENST00000483847 CKBP12277 381 aa12.85□□□□□ -0.35
SMARCC1-205ENST00000483847 RPS6P62753 249 aaKnown RBP12.85□□□□□ -0.35
SMARCC1-205ENST00000483847 MBTPS1Q14703 1052 aa12.85□□□□□ -0.35
SMARCC1-205ENST00000483847 CSPP1Q1MSJ5 1256 aa12.85□□□□□ -0.35
SMARCC1-205ENST00000483847 SYDE2Q5VT97 1194 aa12.85□□□□□ -0.35
SMARCC1-205ENST00000483847 BTNL9Q6UXG8 535 aa12.85□□□□□ -0.35
SMARCC1-205ENST00000483847 RNF207Q6ZRF8 634 aa12.85□□□□□ -0.35
SMARCC1-205ENST00000483847 CCDC155Q8N6L0 562 aa12.85□□□□□ -0.35
SMARCC1-205ENST00000483847 DCAF4Q8WV16 495 aa12.85□□□□□ -0.35
SMARCC1-205ENST00000483847 AFG1LQ8WV93 481 aa12.85□□□□□ -0.35
SMARCC1-205ENST00000483847 KAT2BQ92831 832 aa12.85□□□□□ -0.35
SMARCC1-205ENST00000483847 NACAP1Q9BZK3 213 aa12.85□□□□□ -0.35
SMARCC1-205ENST00000483847 GPCPD1Q9NPB8 672 aa12.85□□□□□ -0.35
SMARCC1-205ENST00000483847 C5orf42Q9H799 3197 aa12.85□□□□□ -0.35
SMARCC1-205ENST00000483847 FRMPD2Q68DX3 1309 aaPredicted RBP12.85□□□□□ -0.35
SMARCC1-205ENST00000483847 ABHD14A-ACY1A0A1B0GW23 586 aa12.84□□□□□ -0.35
SMARCC1-205ENST00000483847 POTEB3A0JP26 581 aa12.84□□□□□ -0.35
SMARCC1-205ENST00000483847 DCXO43602 365 aa12.84□□□□□ -0.35
SMARCC1-205ENST00000483847 MMP3P08254 477 aa12.84□□□□□ -0.35
SMARCC1-205ENST00000483847 NOVP48745 357 aa12.84□□□□□ -0.35
SMARCC1-205ENST00000483847 HNRNPUQ00839 825 aaKnown RBP eCLIP12.84□□□□□ -0.35
SMARCC1-205ENST00000483847 RBL2Q08999 1139 aa12.84□□□□□ -0.35
SMARCC1-205ENST00000483847 CCDC62Q6P9F0 684 aa12.84□□□□□ -0.35
SMARCC1-205ENST00000483847 TRAF7Q6Q0C0 670 aa12.84□□□□□ -0.35
SMARCC1-205ENST00000483847 POTEBQ6S5H4 581 aa12.84□□□□□ -0.35
SMARCC1-205ENST00000483847 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.84□□□□□ -0.352e-8■■□□□ 12.8
SMARCC1-205ENST00000483847 SESTD1Q86VW0 696 aa12.84□□□□□ -0.35
SMARCC1-205ENST00000483847 FBXO22Q8NEZ5 403 aa12.84□□□□□ -0.35
SMARCC1-205ENST00000483847 NEK9Q8TD19 979 aa12.84□□□□□ -0.35
SMARCC1-205ENST00000483847 WNT8BQ93098 351 aa12.84□□□□□ -0.35
SMARCC1-205ENST00000483847 ZNF318Q5VUA4 2279 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms