RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 CABYRO75952 493 aa16.08■□□□□ 0.16
VARS-225ENST00000482996 REC8O95072 547 aa16.08■□□□□ 0.16
VARS-225ENST00000482996 SMARCA1P28370 1054 aa16.08■□□□□ 0.16
VARS-225ENST00000482996 HSD17B4P51659 736 aa16.08■□□□□ 0.16
VARS-225ENST00000482996 MDM2Q00987 491 aaPredicted RBP16.08■□□□□ 0.16
VARS-225ENST00000482996 PPP2R5BQ15173 497 aa16.08■□□□□ 0.16
VARS-225ENST00000482996 ARHGEF16Q5VV41 709 aa16.08■□□□□ 0.16
VARS-225ENST00000482996 PIBF1Q8WXW3 757 aa16.08■□□□□ 0.16
VARS-225ENST00000482996 RRP36Q96EU6 259 aaKnown RBP16.08■□□□□ 0.16
VARS-225ENST00000482996 SPZ1Q9BXG8 430 aa16.08■□□□□ 0.16
VARS-225ENST00000482996 UBE2OQ9C0C9 1292 aaKnown RBP16.08■□□□□ 0.16
VARS-225ENST00000482996 COL20A1Q9P218 1284 aa16.08■□□□□ 0.16
VARS-225ENST00000482996 GCOM1H8Y6P7 765 aaPredicted RBP16.07■□□□□ 0.16
VARS-225ENST00000482996 HMGB1P09429 215 aaKnown RBP16.07■□□□□ 0.16
VARS-225ENST00000482996 CLTBP09497 229 aa16.07■□□□□ 0.16
VARS-225ENST00000482996 POLR2MP0CAP2 368 aa16.07■□□□□ 0.16
VARS-225ENST00000482996 FXR1P51114 621 aaKnown RBP eCLIP16.07■□□□□ 0.161e-6■■■□□ 18.6
VARS-225ENST00000482996 GHRHRQ02643 423 aa16.07■□□□□ 0.16
VARS-225ENST00000482996 TTLL4Q14679 1199 aa16.07■□□□□ 0.16
VARS-225ENST00000482996 STXBP2Q15833 593 aa16.07■□□□□ 0.16
VARS-225ENST00000482996 BRDTQ58F21 947 aaPredicted RBP16.07■□□□□ 0.16
VARS-225ENST00000482996 DHX32Q7L7V1 743 aaKnown RBP16.07■□□□□ 0.16
VARS-225ENST00000482996 SGMS1Q86VZ5 419 aa16.07■□□□□ 0.16
VARS-225ENST00000482996 RASEFQ8IZ41 740 aa16.07■□□□□ 0.16
VARS-225ENST00000482996 TOX2Q96NM4 488 aa16.07■□□□□ 0.16
VARS-225ENST00000482996 PDLIM7Q9NR12 457 aa16.07■□□□□ 0.16
VARS-225ENST00000482996 SEC63Q9UGP8 760 aaKnown RBP16.07■□□□□ 0.16
VARS-225ENST00000482996 GTF3C3Q9Y5Q9 886 aa16.07■□□□□ 0.16
VARS-225ENST00000482996 MROH7Q68CQ1 1323 aa16.07■□□□□ 0.16
VARS-225ENST00000482996 OPLAHO14841 1288 aa16.06■□□□□ 0.16
VARS-225ENST00000482996 EIF2AK2P19525 551 aaKnown RBP16.06■□□□□ 0.16
VARS-225ENST00000482996 CPT1AP50416 773 aa16.06■□□□□ 0.16
VARS-225ENST00000482996 COL9A3Q14050 684 aaPredicted RBP16.06■□□□□ 0.16
VARS-225ENST00000482996 CXCL17Q6UXB2 119 aa16.06■□□□□ 0.16
VARS-225ENST00000482996 ANKRD33Q7Z3H0 272 aa16.06■□□□□ 0.16
VARS-225ENST00000482996 OR6J1Q8NGC5 347 aa16.06■□□□□ 0.16
VARS-225ENST00000482996 PXMP2Q9NR77 195 aa16.06■□□□□ 0.16
VARS-225ENST00000482996 ARVCFO00192 962 aa16.05■□□□□ 0.16
VARS-225ENST00000482996 TXNP10599 105 aaKnown RBP16.05■□□□□ 0.16
VARS-225ENST00000482996 RXRAP19793 462 aa16.05■□□□□ 0.16
VARS-225ENST00000482996 PTGS1P23219 599 aa16.05■□□□□ 0.16
VARS-225ENST00000482996 FGD1P98174 961 aa16.05■□□□□ 0.16
VARS-225ENST00000482996 EXOSC10Q01780 885 aaKnown RBP16.05■□□□□ 0.16
VARS-225ENST00000482996 ADCK5Q3MIX3 580 aa16.05■□□□□ 0.16
VARS-225ENST00000482996 TMEM63BQ5T3F8 832 aa16.05■□□□□ 0.16
VARS-225ENST00000482996 MICU3Q86XE3 530 aa16.05■□□□□ 0.16
VARS-225ENST00000482996 TDHQ8IZJ6 230 aa16.05■□□□□ 0.16
VARS-225ENST00000482996 FANCBQ8NB91 859 aa16.05■□□□□ 0.16
VARS-225ENST00000482996 SEZ6LQ9BYH1 1024 aa16.05■□□□□ 0.16
VARS-225ENST00000482996 TMEM39AQ9NV64 488 aa16.05■□□□□ 0.16
VARS-225ENST00000482996 POLR3EQ9NVU0 708 aa16.05■□□□□ 0.16
VARS-225ENST00000482996 TLR3O15455 904 aaKnown RBP16.04■□□□□ 0.16
VARS-225ENST00000482996 EIF3JO75822 258 aaKnown RBP16.04■□□□□ 0.16
VARS-225ENST00000482996 PLEKHA8P1O95397 391 aa16.04■□□□□ 0.16
VARS-225ENST00000482996 NR3C2P08235 984 aa16.04■□□□□ 0.16
VARS-225ENST00000482996 HOXA13P31271 388 aaPredicted RBP16.04■□□□□ 0.16
VARS-225ENST00000482996 HSPA4P34932 840 aa16.04■□□□□ 0.16
VARS-225ENST00000482996 CDK7P50613 346 aa16.04■□□□□ 0.16
VARS-225ENST00000482996 SEPT14Q6ZU15 432 aa16.04■□□□□ 0.16
VARS-225ENST00000482996 SH3RF1Q7Z6J0 888 aa16.04■□□□□ 0.16
VARS-225ENST00000482996 RAB11FIP4Q86YS3 637 aa16.04■□□□□ 0.16
VARS-225ENST00000482996 SRBD1Q8N5C6 995 aaKnown RBP16.04■□□□□ 0.16
VARS-225ENST00000482996 KCNB2Q92953 911 aa16.04■□□□□ 0.16
VARS-225ENST00000482996 TCEANC2Q96MN5 208 aa16.04■□□□□ 0.16
VARS-225ENST00000482996 RBM28Q9NW13 759 aaKnown RBP16.04■□□□□ 0.16
VARS-225ENST00000482996 TRIM43BA6NCK2 446 aa16.03■□□□□ 0.16
VARS-225ENST00000482996 KIAA0355O15063 1070 aa16.03■□□□□ 0.16
VARS-225ENST00000482996 ZBTB43O43298 467 aa16.03■□□□□ 0.16
VARS-225ENST00000482996 MYCLP12524 364 aaPredicted RBP16.03■□□□□ 0.16
VARS-225ENST00000482996 RAG1P15918 1043 aa16.03■□□□□ 0.16
VARS-225ENST00000482996 FAAP100Q0VG06 881 aa16.03■□□□□ 0.16
VARS-225ENST00000482996 APOA5Q6Q788 366 aa16.03■□□□□ 0.16
VARS-225ENST00000482996 TMTC3Q6ZXV5 915 aa16.03■□□□□ 0.16
VARS-225ENST00000482996 FCHSD1Q86WN1 690 aa16.03■□□□□ 0.16
VARS-225ENST00000482996 BADQ92934 168 aa16.03■□□□□ 0.16
VARS-225ENST00000482996 CUL5Q93034 780 aa16.03■□□□□ 0.16
VARS-225ENST00000482996 TRIM43Q96BQ3 446 aaPredicted RBP16.03■□□□□ 0.16
VARS-225ENST00000482996 JAKMIP1Q96N16 626 aaKnown RBP16.03■□□□□ 0.16
VARS-225ENST00000482996 PDCD2LQ9BRP1 358 aa16.03■□□□□ 0.16
VARS-225ENST00000482996 EPB41L2O43491 1005 aaKnown RBP16.02■□□□□ 0.16
VARS-225ENST00000482996 KPNA6O60684 536 aa16.02■□□□□ 0.16
VARS-225ENST00000482996 ARIH2O95376 493 aa16.02■□□□□ 0.16
VARS-225ENST00000482996 GH1P01241 217 aa16.02■□□□□ 0.16
VARS-225ENST00000482996 MYL3P08590 195 aa16.02■□□□□ 0.16
VARS-225ENST00000482996 CCND2P30279 289 aa16.02■□□□□ 0.16
VARS-225ENST00000482996 ITGA7Q13683 1181 aa16.02■□□□□ 0.16
VARS-225ENST00000482996 RTN1Q16799 776 aa16.02■□□□□ 0.16
VARS-225ENST00000482996 CCDC62Q6P9F0 684 aa16.02■□□□□ 0.16
VARS-225ENST00000482996 BLOC1S2Q6QNY1 142 aa16.02■□□□□ 0.16
VARS-225ENST00000482996 CMTR1Q8N1G2 835 aaKnown RBP16.02■□□□□ 0.16
VARS-225ENST00000482996 COPS5Q92905 334 aa16.02■□□□□ 0.16
VARS-225ENST00000482996 MTG1Q9BT17 334 aaPredicted RBP16.02■□□□□ 0.16
VARS-225ENST00000482996 SNX14Q9Y5W7 946 aa16.02■□□□□ 0.16
VARS-225ENST00000482996 MRVI1Q9Y6F6 885 aa16.02■□□□□ 0.16
VARS-225ENST00000482996 KLF18A0A0U1RQI7 1052 aa16.01■□□□□ 0.15
VARS-225ENST00000482996 A6NJR5 290 aa16.01■□□□□ 0.15
VARS-225ENST00000482996 PSMA5P28066 241 aa16.01■□□□□ 0.15
VARS-225ENST00000482996 PGM5Q15124 567 aa16.01■□□□□ 0.15
VARS-225ENST00000482996 KCNV1Q6PIU1 500 aa16.01■□□□□ 0.15
VARS-225ENST00000482996 VSIG10LQ86VR7 867 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms