RNA–Protein interactions for RNA: ENST00000482902.5

SSR4-209, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-209ENST00000482902 GNGT1P63211 74 aa20.07■□□□□ 0.8
SSR4-209ENST00000482902 GBP6Q6ZN66 633 aa20.07■□□□□ 0.8
SSR4-209ENST00000482902 KRT25Q7Z3Z0 450 aa20.07■□□□□ 0.8
SSR4-209ENST00000482902 EEF2KMTQ96G04 330 aa20.07■□□□□ 0.8
SSR4-209ENST00000482902 LEMD3Q9Y2U8 911 aa20.07■□□□□ 0.8
SSR4-209ENST00000482902 SHTN1A0MZ66 631 aa20.06■□□□□ 0.8
SSR4-209ENST00000482902 SRGNP10124 158 aa20.06■□□□□ 0.8
SSR4-209ENST00000482902 PDE4DQ08499 809 aa20.06■□□□□ 0.8
SSR4-209ENST00000482902 NONOQ15233 471 aaKnown RBP eCLIP20.06■□□□□ 0.8
SSR4-209ENST00000482902 PRPF38AQ8NAV1 312 aaKnown RBP20.06■□□□□ 0.8
SSR4-209ENST00000482902 P2RX5Q93086 422 aa20.06■□□□□ 0.8
SSR4-209ENST00000482902 CCDC47Q96A33 483 aaKnown RBP20.06■□□□□ 0.8
SSR4-209ENST00000482902 JAKMIP2Q96AA8 810 aa20.06■□□□□ 0.8
SSR4-209ENST00000482902 GPR101Q96P66 508 aaPredicted RBP20.06■□□□□ 0.8
SSR4-209ENST00000482902 SPZ1Q9BXG8 430 aa20.06■□□□□ 0.8
SSR4-209ENST00000482902 TRIM9Q9C026 710 aa20.06■□□□□ 0.8
SSR4-209ENST00000482902 EXOC1Q9NV70 894 aa20.06■□□□□ 0.8
SSR4-209ENST00000482902 SMCO2A6NFE2 343 aa20.06■□□□□ 0.8
SSR4-209ENST00000482902 LDHCP07864 332 aa20.06■□□□□ 0.8
SSR4-209ENST00000482902 USP8P40818 1118 aa20.06■□□□□ 0.8
SSR4-209ENST00000482902 FAM184BQ9ULE4 1060 aa20.06■□□□□ 0.8
SSR4-209ENST00000482902 RTCBQ9Y3I0 505 aaKnown RBP20.06■□□□□ 0.8
SSR4-209ENST00000482902 CCNE1P24864 410 aa20.05■□□□□ 0.8
SSR4-209ENST00000482902 ASIC1P78348 528 aa20.05■□□□□ 0.8
SSR4-209ENST00000482902 GRAPQ13588 217 aa20.05■□□□□ 0.8
SSR4-209ENST00000482902 NFIXQ14938 502 aa20.05■□□□□ 0.8
SSR4-209ENST00000482902 CCDC122Q5T0U0 273 aa20.05■□□□□ 0.8
SSR4-209ENST00000482902 AMIGO3Q86WK7 504 aa20.05■□□□□ 0.8
SSR4-209ENST00000482902 GRAPLQ8TC17 118 aaPredicted RBP20.05■□□□□ 0.8
SSR4-209ENST00000482902 EYA3Q99504 573 aa20.05■□□□□ 0.8
SSR4-209ENST00000482902 ZNF287Q9HBT7 754 aa20.05■□□□□ 0.8
SSR4-209ENST00000482902 COL24A1Q17RW2 1714 aa20.05■□□□□ 0.8
SSR4-209ENST00000482902 BICDL2A1A5D9 508 aa20.05■□□□□ 0.8
SSR4-209ENST00000482902 TRIM21P19474 475 aaKnown RBP20.05■□□□□ 0.8
SSR4-209ENST00000482902 STK4Q13043 487 aa20.05■□□□□ 0.8
SSR4-209ENST00000482902 ANKRD40Q6AI12 368 aa20.05■□□□□ 0.8
SSR4-209ENST00000482902 ZNF804AQ7Z570 1209 aa20.05■□□□□ 0.8
SSR4-209ENST00000482902 ARHGEF1Q92888 912 aaKnown RBP20.05■□□□□ 0.8
SSR4-209ENST00000482902 RTFDC1Q9BY42 306 aaPredicted RBP20.05■□□□□ 0.8
SSR4-209ENST00000482902 C6orf50Q9HD87 102 aa20.05■□□□□ 0.8
SSR4-209ENST00000482902 AGPAT5Q9NUQ2 364 aa20.05■□□□□ 0.8
SSR4-209ENST00000482902 ATXN2Q99700 1313 aaKnown RBP20.05■□□□□ 0.8
SSR4-209ENST00000482902 ZNF185O15231 689 aa20.04■□□□□ 0.8
SSR4-209ENST00000482902 TECP42680 631 aa20.04■□□□□ 0.8
SSR4-209ENST00000482902 CDK8P49336 464 aa20.04■□□□□ 0.8
SSR4-209ENST00000482902 KLK7P49862 253 aa20.04■□□□□ 0.8
SSR4-209ENST00000482902 TBC1D8BQ0IIM8 1120 aa20.04■□□□□ 0.8
SSR4-209ENST00000482902 MEA1Q16626 185 aa20.04■□□□□ 0.8
SSR4-209ENST00000482902 USP17L2Q6R6M4 530 aa20.04■□□□□ 0.8
SSR4-209ENST00000482902 CNOT6LQ96LI5 555 aaKnown RBP20.04■□□□□ 0.8
SSR4-209ENST00000482902 C7orf25Q9BPX7 421 aa20.04■□□□□ 0.8
SSR4-209ENST00000482902 TTYH3Q9C0H2 523 aa20.04■□□□□ 0.8
SSR4-209ENST00000482902 GNA11P29992 359 aa20.04■□□□□ 0.8
SSR4-209ENST00000482902 BTDP43251 543 aa20.04■□□□□ 0.8
SSR4-209ENST00000482902 FNTAP49354 379 aa20.04■□□□□ 0.8
SSR4-209ENST00000482902 KRT83P78385 493 aa20.04■□□□□ 0.8
SSR4-209ENST00000482902 NEK8Q86SG6 692 aa20.04■□□□□ 0.8
SSR4-209ENST00000482902 NUP58Q9BVL2 599 aa20.04■□□□□ 0.8
SSR4-209ENST00000482902 VAT1LQ9HCJ6 419 aa20.04■□□□□ 0.8
SSR4-209ENST00000482902 SAMM50Q9Y512 469 aa20.04■□□□□ 0.8
SSR4-209ENST00000482902 RASSF10A6NK89 507 aa20.03■□□□□ 0.8
SSR4-209ENST00000482902 GOLGA8KD6RF30 607 aa20.03■□□□□ 0.8
SSR4-209ENST00000482902 CCDC172P0C7W6 258 aa20.03■□□□□ 0.8
SSR4-209ENST00000482902 FCER1AP12319 257 aa20.03■□□□□ 0.8
SSR4-209ENST00000482902 C2orf54Q08AI8 447 aa20.03■□□□□ 0.8
SSR4-209ENST00000482902 SOGA3Q5TF21 947 aa20.03■□□□□ 0.8
SSR4-209ENST00000482902 ZNF662Q6ZS27 426 aa20.03■□□□□ 0.8
SSR4-209ENST00000482902 KIAA1328Q86T90 577 aa20.03■□□□□ 0.8
SSR4-209ENST00000482902 CAGE1Q8TC20 777 aa20.03■□□□□ 0.8
SSR4-209ENST00000482902 RRP36Q96EU6 259 aaKnown RBP20.03■□□□□ 0.8
SSR4-209ENST00000482902 ZNHIT6Q9NWK9 470 aaKnown RBP20.03■□□□□ 0.8
SSR4-209ENST00000482902 MTIF2P46199 727 aaKnown RBP20.03■□□□□ 0.8
SSR4-209ENST00000482902 TTC19Q6DKK2 380 aaPredicted RBP20.03■□□□□ 0.8
SSR4-209ENST00000482902 C16orf86Q6ZW13 317 aa20.03■□□□□ 0.8
SSR4-209ENST00000482902 SND1Q7KZF4 910 aaKnown RBP eCLIP20.03■□□□□ 0.86e-15■■■■■ 44.6
SSR4-209ENST00000482902 FAM114A1Q8IWE2 563 aa20.03■□□□□ 0.8
SSR4-209ENST00000482902 PCMTD1Q96MG8 357 aaPredicted RBP20.03■□□□□ 0.8
SSR4-209ENST00000482902 SEC63Q9UGP8 760 aaKnown RBP20.03■□□□□ 0.8
SSR4-209ENST00000482902 CYLC1P35663 651 aaPredicted RBP20.02■□□□□ 0.8
SSR4-209ENST00000482902 SKOR1P84550 965 aa20.02■□□□□ 0.8
SSR4-209ENST00000482902 RETREG2Q8NC44 543 aa20.02■□□□□ 0.8
SSR4-209ENST00000482902 NEDD1Q8NHV4 660 aa20.02■□□□□ 0.8
SSR4-209ENST00000482902 TBCKQ8TEA7 893 aa20.02■□□□□ 0.8
SSR4-209ENST00000482902 SNED1Q8TER0 1413 aa20.02■□□□□ 0.8
SSR4-209ENST00000482902 NOC4LQ9BVI4 516 aaKnown RBP20.02■□□□□ 0.8
SSR4-209ENST00000482902 CCNL1Q9UK58 526 aaPredicted RBP20.02■□□□□ 0.8
SSR4-209ENST00000482902 ZBED6P86452 979 aa20.02■□□□□ 0.79
SSR4-209ENST00000482902 AMPD3Q01432 767 aa20.02■□□□□ 0.79
SSR4-209ENST00000482902 TEX11Q8IYF3 940 aa20.02■□□□□ 0.79
SSR4-209ENST00000482902 EHBP1Q8NDI1 1231 aa20.02■□□□□ 0.79
SSR4-209ENST00000482902 DONSONQ9NYP3 566 aa20.02■□□□□ 0.79
SSR4-209ENST00000482902 RCCD1A6NED2 376 aa20.01■□□□□ 0.79
SSR4-209ENST00000482902 PIGSQ96S52 555 aa20.01■□□□□ 0.79
SSR4-209ENST00000482902 MMTAG2Q9BU76 263 aaKnown RBP20.01■□□□□ 0.79
SSR4-209ENST00000482902 LACRTQ9GZZ8 138 aa20.01■□□□□ 0.79
SSR4-209ENST00000482902 NHEJ1Q9H9Q4 299 aaPredicted RBP20.01■□□□□ 0.79
SSR4-209ENST00000482902 BIN2Q9UBW5 565 aaPredicted RBP20.01■□□□□ 0.79
SSR4-209ENST00000482902 CEP83Q9Y592 693 aa20.01■□□□□ 0.79
SSR4-209ENST00000482902 CAPN7Q9Y6W3 813 aa20.01■□□□□ 0.79
SSR4-209ENST00000482902 ANO9A1A5B4 782 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms