RNA–Protein interactions for RNA: ENST00000482596.1

CHD6-209, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best)

Gene CHD6, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-209ENST00000482596 FCER1AP12319 257 aa8.15□□□□□ -1.1
CHD6-209ENST00000482596 ZEB1P37275 1124 aaPredicted RBP8.15□□□□□ -1.1
CHD6-209ENST00000482596 RBM25P49756 843 aaKnown RBP8.15□□□□□ -1.1
CHD6-209ENST00000482596 COPS2P61201 443 aa8.15□□□□□ -1.1
CHD6-209ENST00000482596 MTMR3Q13615 1198 aa8.15□□□□□ -1.1
CHD6-209ENST00000482596 PLS1Q14651 629 aa8.15□□□□□ -1.1
CHD6-209ENST00000482596 GPNMBQ14956 572 aa8.15□□□□□ -1.1
CHD6-209ENST00000482596 KMT5BQ4FZB7 885 aa8.15□□□□□ -1.1
CHD6-209ENST00000482596 UBALD2Q8IYN6 164 aa8.15□□□□□ -1.1
CHD6-209ENST00000482596 ZGPATQ8N5A5 531 aaKnown RBP8.15□□□□□ -1.1
CHD6-209ENST00000482596 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.15□□□□□ -1.1
CHD6-209ENST00000482596 PPP1R13LQ8WUF5 828 aa8.15□□□□□ -1.1
CHD6-209ENST00000482596 NLRP7Q8WX94 980 aa8.15□□□□□ -1.1
CHD6-209ENST00000482596 DNAJC18Q9H819 358 aa8.15□□□□□ -1.1
CHD6-209ENST00000482596 SPC25Q9HBM1 224 aa8.15□□□□□ -1.1
CHD6-209ENST00000482596 PARD6AQ9NPB6 346 aa8.15□□□□□ -1.1
CHD6-209ENST00000482596 BARX2Q9UMQ3 279 aaPredicted RBP8.15□□□□□ -1.1
CHD6-209ENST00000482596 USP18Q9UMW8 372 aa8.15□□□□□ -1.1
CHD6-209ENST00000482596 SORCS3Q9UPU3 1222 aa8.15□□□□□ -1.1
CHD6-209ENST00000482596 MROH5Q6ZUA9 1318 aa8.14□□□□□ -1.11
CHD6-209ENST00000482596 CLSPNQ9HAW4 1339 aa8.14□□□□□ -1.11
CHD6-209ENST00000482596 SLC30A4O14863 429 aa8.14□□□□□ -1.11
CHD6-209ENST00000482596 GRM6O15303 877 aa8.14□□□□□ -1.11
CHD6-209ENST00000482596 LDHBP07195 334 aaKnown RBP8.14□□□□□ -1.11
CHD6-209ENST00000482596 NEFMP07197 916 aa8.14□□□□□ -1.11
CHD6-209ENST00000482596 CFHP08603 1231 aa8.14□□□□□ -1.11
CHD6-209ENST00000482596 COASYQ13057 564 aa8.14□□□□□ -1.11
CHD6-209ENST00000482596 CCDC144BQ3MJ40 725 aa8.14□□□□□ -1.11
CHD6-209ENST00000482596 TAF7LQ5H9L4 462 aa8.14□□□□□ -1.11
CHD6-209ENST00000482596 TMEM192Q8IY95 271 aa8.14□□□□□ -1.11
CHD6-209ENST00000482596 WDR66Q8TBY9 1149 aa8.14□□□□□ -1.11
CHD6-209ENST00000482596 MROH8Q9H579 483 aa8.14□□□□□ -1.11
CHD6-209ENST00000482596 RPAP3Q9H6T3 665 aaPredicted RBP8.14□□□□□ -1.11
CHD6-209ENST00000482596 ANKFY1Q9P2R3 1169 aa8.14□□□□□ -1.11
CHD6-209ENST00000482596 ZBTB21Q9ULJ3 1066 aa8.14□□□□□ -1.11
CHD6-209ENST00000482596 PCDHB3Q9Y5E6 796 aa8.14□□□□□ -1.11
CHD6-209ENST00000482596 CACNA1IQ9P0X4 2223 aa8.14□□□□□ -1.11
CHD6-209ENST00000482596 DDX58O95786 925 aaKnown RBP8.13□□□□□ -1.11
CHD6-209ENST00000482596 GLP2RO95838 553 aa8.13□□□□□ -1.11
CHD6-209ENST00000482596 SP9P0CG40 484 aa8.13□□□□□ -1.11
CHD6-209ENST00000482596 BTDP43251 543 aa8.13□□□□□ -1.11
CHD6-209ENST00000482596 RHBDL3P58872 404 aa8.13□□□□□ -1.11
CHD6-209ENST00000482596 ZC3H14Q6PJT7 736 aaKnown RBP8.13□□□□□ -1.11
CHD6-209ENST00000482596 LMBR1LQ6UX01 489 aa8.13□□□□□ -1.11
CHD6-209ENST00000482596 KSR2Q6VAB6 950 aa8.13□□□□□ -1.11
CHD6-209ENST00000482596 FBXO11Q86XK2 927 aa8.13□□□□□ -1.11
CHD6-209ENST00000482596 GPR161Q8N6U8 529 aaKnown RBP8.13□□□□□ -1.11
CHD6-209ENST00000482596 ZNF516Q92618 1163 aa8.13□□□□□ -1.11
CHD6-209ENST00000482596 MMP19Q99542 508 aa8.13□□□□□ -1.11
CHD6-209ENST00000482596 INSL6Q9Y581 213 aa8.13□□□□□ -1.11
CHD6-209ENST00000482596 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.13□□□□□ -1.11
CHD6-209ENST00000482596 DOPEY1Q5JWR5 2465 aa8.12□□□□□ -1.11
CHD6-209ENST00000482596 KALRNO60229 2985 aa8.12□□□□□ -1.11
CHD6-209ENST00000482596 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.12□□□□□ -1.11
CHD6-209ENST00000482596 ACTN4O43707 911 aaKnown RBP8.12□□□□□ -1.11
CHD6-209ENST00000482596 RIPK4P57078 832 aa8.12□□□□□ -1.11
CHD6-209ENST00000482596 NEXNQ0ZGT2 675 aa8.12□□□□□ -1.11
CHD6-209ENST00000482596 ACVR2BQ13705 512 aa8.12□□□□□ -1.11
CHD6-209ENST00000482596 CCDC57Q2TAC2 916 aa8.12□□□□□ -1.11
CHD6-209ENST00000482596 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.12□□□□□ -1.11
CHD6-209ENST00000482596 ADGRD2Q7Z7M1 963 aa8.12□□□□□ -1.11
CHD6-209ENST00000482596 ACER1Q8TDN7 264 aa8.12□□□□□ -1.11
CHD6-209ENST00000482596 SUSD6Q92537 303 aa8.12□□□□□ -1.11
CHD6-209ENST00000482596 SAMD11Q96NU1 681 aa8.12□□□□□ -1.11
CHD6-209ENST00000482596 FEZ1Q99689 392 aa8.12□□□□□ -1.11
CHD6-209ENST00000482596 SIL1Q9H173 461 aa8.12□□□□□ -1.11
CHD6-209ENST00000482596 HERC5Q9UII4 1024 aaKnown RBP8.12□□□□□ -1.11
CHD6-209ENST00000482596 DIS3Q9Y2L1 958 aaKnown RBP8.12□□□□□ -1.11
CHD6-209ENST00000482596 PARP14Q460N5 1801 aa8.12□□□□□ -1.11
CHD6-209ENST00000482596 TICRRQ7Z2Z1 1910 aa8.11□□□□□ -1.11
CHD6-209ENST00000482596 DDX11L8A8MPP1 907 aa8.11□□□□□ -1.11
CHD6-209ENST00000482596 CABYRO75952 493 aa8.11□□□□□ -1.11
CHD6-209ENST00000482596 ASGR2P07307 311 aa8.11□□□□□ -1.11
CHD6-209ENST00000482596 ATF7P17544 494 aaPredicted RBP8.11□□□□□ -1.11
CHD6-209ENST00000482596 NKX3-2P78367 333 aa8.11□□□□□ -1.11
CHD6-209ENST00000482596 HTRA4P83105 476 aaPredicted RBP8.11□□□□□ -1.11
CHD6-209ENST00000482596 RBM10P98175 930 aaKnown RBP8.11□□□□□ -1.11
CHD6-209ENST00000482596 CCDC6Q16204 474 aa8.11□□□□□ -1.11
CHD6-209ENST00000482596 CNKSR3Q6P9H4 555 aa8.11□□□□□ -1.11
CHD6-209ENST00000482596 RDH13Q8NBN7 331 aa8.11□□□□□ -1.11
CHD6-209ENST00000482596 RETREG2Q8NC44 543 aa8.11□□□□□ -1.11
CHD6-209ENST00000482596 CACNA2D2Q9NY47 1150 aa8.11□□□□□ -1.11
CHD6-209ENST00000482596 SALL1Q9NSC2 1324 aa8.1□□□□□ -1.11
CHD6-209ENST00000482596 ABCA12Q86UK0 2595 aa8.1□□□□□ -1.11
CHD6-209ENST00000482596 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.1□□□□□ -1.11
CHD6-209ENST00000482596 ELL2O00472 640 aaPredicted RBP8.1□□□□□ -1.11
CHD6-209ENST00000482596 KINO60870 393 aaKnown RBP8.1□□□□□ -1.11
CHD6-209ENST00000482596 SUPT20HL2P0C7V6 817 aa8.1□□□□□ -1.11
CHD6-209ENST00000482596 HSPA5P11021 654 aaKnown RBP8.1□□□□□ -1.11
CHD6-209ENST00000482596 COG2Q14746 738 aa8.1□□□□□ -1.11
CHD6-209ENST00000482596 FSCN1Q16658 493 aaKnown RBP8.1□□□□□ -1.11
CHD6-209ENST00000482596 BLOC1S3Q6QNY0 202 aa8.1□□□□□ -1.11
CHD6-209ENST00000482596 VGLL2Q8N8G2 317 aa8.1□□□□□ -1.11
CHD6-209ENST00000482596 NETO1Q8TDF5 533 aa8.1□□□□□ -1.11
CHD6-209ENST00000482596 PIK3R5Q8WYR1 880 aa8.1□□□□□ -1.11
CHD6-209ENST00000482596 RTP3Q9BQQ7 232 aa8.1□□□□□ -1.11
CHD6-209ENST00000482596 MBIPQ9NS73 344 aa8.1□□□□□ -1.11
CHD6-209ENST00000482596 MYO9AB2RTY4 2548 aa8.1□□□□□ -1.11
CHD6-209ENST00000482596 SPTA1P02549 2419 aa8.09□□□□□ -1.11
CHD6-209ENST00000482596 GH2P01242 217 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms