RNA–Protein interactions for RNA: ENST00000482563.1

RBM39-233, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 1,737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-233ENST00000482563 PTPRAP18433 802 aa8.73□□□□□ -1.01
RBM39-233ENST00000482563 ZBED6P86452 979 aa8.73□□□□□ -1.01
RBM39-233ENST00000482563 PDCD2Q16342 344 aaPredicted RBP8.73□□□□□ -1.01
RBM39-233ENST00000482563 STYK1Q6J9G0 422 aa8.73□□□□□ -1.01
RBM39-233ENST00000482563 TBC1D1Q86TI0 1168 aaPredicted RBP8.73□□□□□ -1.01
RBM39-233ENST00000482563 OR8H2Q8N162 312 aa8.73□□□□□ -1.01
RBM39-233ENST00000482563 ADCY4Q8NFM4 1077 aa8.73□□□□□ -1.01
RBM39-233ENST00000482563 NELL1Q92832 810 aa8.73□□□□□ -1.01
RBM39-233ENST00000482563 RIPOR3Q96MK2 946 aa8.73□□□□□ -1.01
RBM39-233ENST00000482563 BLOC1S4Q9NUP1 217 aa8.73□□□□□ -1.01
RBM39-233ENST00000482563 MARK1Q9P0L2 795 aa8.73□□□□□ -1.01
RBM39-233ENST00000482563 COQ6Q9Y2Z9 468 aa8.73□□□□□ -1.01
RBM39-233ENST00000482563 PRAMEF27A3QJZ7 478 aa8.72□□□□□ -1.01
RBM39-233ENST00000482563 NOP56O00567 594 aaKnown RBP8.72□□□□□ -1.01
RBM39-233ENST00000482563 NCAM2O15394 837 aa8.72□□□□□ -1.01
RBM39-233ENST00000482563 TGM5O43548 720 aa8.72□□□□□ -1.01
RBM39-233ENST00000482563 ZNF862O60290 1169 aa8.72□□□□□ -1.01
RBM39-233ENST00000482563 CKMP06732 381 aa8.72□□□□□ -1.01
RBM39-233ENST00000482563 MECP2P51608 486 aaKnown RBP8.72□□□□□ -1.01
RBM39-233ENST00000482563 MPP1Q00013 466 aa8.72□□□□□ -1.01
RBM39-233ENST00000482563 WDR45BQ5MNZ6 344 aa8.72□□□□□ -1.01
RBM39-233ENST00000482563 GTF2IRD2BQ6EKJ0 949 aa8.72□□□□□ -1.01
RBM39-233ENST00000482563 GTF2IRD2Q86UP8 949 aa8.72□□□□□ -1.01
RBM39-233ENST00000482563 OR2C3Q8N628 320 aa8.72□□□□□ -1.01
RBM39-233ENST00000482563 FAM13CQ8NE31 585 aa8.72□□□□□ -1.01
RBM39-233ENST00000482563 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.72□□□□□ -1.01
RBM39-233ENST00000482563 JADE3Q92613 823 aa8.72□□□□□ -1.01
RBM39-233ENST00000482563 ADAM19Q9H013 955 aa8.72□□□□□ -1.01
RBM39-233ENST00000482563 MYLK2Q9H1R3 596 aa8.72□□□□□ -1.01
RBM39-233ENST00000482563 RASSF1Q9NS23 344 aa8.72□□□□□ -1.01
RBM39-233ENST00000482563 RTEL1Q9NZ71 1219 aa8.72□□□□□ -1.01
RBM39-233ENST00000482563 GPRC5BQ9NZH0 403 aa8.72□□□□□ -1.01
RBM39-233ENST00000482563 PDP2Q9P2J9 529 aa8.72□□□□□ -1.01
RBM39-233ENST00000482563 TJP2Q9UDY2 1190 aa8.72□□□□□ -1.01
RBM39-233ENST00000482563 SOX1O00570 391 aaPredicted RBP8.71□□□□□ -1.01
RBM39-233ENST00000482563 ATXN7O15265 892 aaPredicted RBP8.71□□□□□ -1.01
RBM39-233ENST00000482563 CD4P01730 458 aa8.71□□□□□ -1.01
RBM39-233ENST00000482563 KPNA1P52294 538 aaPredicted RBP8.71□□□□□ -1.01
RBM39-233ENST00000482563 GUCY1A3Q02108 690 aa8.71□□□□□ -1.01
RBM39-233ENST00000482563 TNP2Q05952 138 aa8.71□□□□□ -1.01
RBM39-233ENST00000482563 KIAA0753Q2KHM9 967 aa8.71□□□□□ -1.01
RBM39-233ENST00000482563 INTS11Q5TA45 600 aaKnown RBP8.71□□□□□ -1.01
RBM39-233ENST00000482563 BROXQ5VW32 411 aa8.71□□□□□ -1.01
RBM39-233ENST00000482563 C12orf40Q86WS4 652 aa8.71□□□□□ -1.01
RBM39-233ENST00000482563 ARHGEF39Q8N4T4 335 aa8.71□□□□□ -1.01
RBM39-233ENST00000482563 FAM26EQ8N5C1 309 aa8.71□□□□□ -1.01
RBM39-233ENST00000482563 WDR89Q96FK6 387 aaPredicted RBP8.71□□□□□ -1.01
RBM39-233ENST00000482563 RCC1LQ96I51 464 aaKnown RBP8.71□□□□□ -1.01
RBM39-233ENST00000482563 FAM204AQ9H8W3 233 aa8.71□□□□□ -1.01
RBM39-233ENST00000482563 KIAA1586Q9HCI6 787 aa8.71□□□□□ -1.01
RBM39-233ENST00000482563 SH2B1Q9NRF2 756 aaPredicted RBP8.71□□□□□ -1.01
RBM39-233ENST00000482563 TOPORSQ9NS56 1045 aaPredicted RBP8.71□□□□□ -1.01
RBM39-233ENST00000482563 TPCN1Q9ULQ1 816 aa8.71□□□□□ -1.01
RBM39-233ENST00000482563 ZKSCAN5Q9Y2L8 839 aa8.71□□□□□ -1.01
RBM39-233ENST00000482563 J3QL48 77 aa8.71□□□□□ -1.02
RBM39-233ENST00000482563 PPM1BO75688 479 aa8.71□□□□□ -1.02
RBM39-233ENST00000482563 MBD4O95243 580 aa8.71□□□□□ -1.02
RBM39-233ENST00000482563 KCNH1O95259 989 aa8.71□□□□□ -1.02
RBM39-233ENST00000482563 TBC1D8O95759 1140 aa8.71□□□□□ -1.02
RBM39-233ENST00000482563 TGFB3P10600 412 aa8.71□□□□□ -1.02
RBM39-233ENST00000482563 PRIM2P49643 509 aa8.71□□□□□ -1.02
RBM39-233ENST00000482563 G3BP1Q13283 466 aaKnown RBP eCLIP8.71□□□□□ -1.02
RBM39-233ENST00000482563 PDE1CQ14123 709 aaPredicted RBP8.71□□□□□ -1.02
RBM39-233ENST00000482563 UBAP2LQ14157 1087 aaKnown RBP8.71□□□□□ -1.02
RBM39-233ENST00000482563 TERF2Q15554 542 aa8.71□□□□□ -1.02
RBM39-233ENST00000482563 DDB1Q16531 1140 aa8.71□□□□□ -1.02
RBM39-233ENST00000482563 TSHZ3Q63HK5 1081 aa8.71□□□□□ -1.02
RBM39-233ENST00000482563 USP53Q70EK8 1073 aa8.71□□□□□ -1.02
RBM39-233ENST00000482563 C11orf74Q86VG3 221 aa8.71□□□□□ -1.02
RBM39-233ENST00000482563 MCATQ8IVS2 390 aaKnown RBP8.71□□□□□ -1.02
RBM39-233ENST00000482563 CCDC144CPQ8IYA2 1237 aa8.71□□□□□ -1.02
RBM39-233ENST00000482563 PHACTR4Q8IZ21 702 aa8.71□□□□□ -1.02
RBM39-233ENST00000482563 LINC00528Q8N1L1 170 aa8.71□□□□□ -1.02
RBM39-233ENST00000482563 ZSCAN18Q8TBC5 510 aaPredicted RBP8.71□□□□□ -1.02
RBM39-233ENST00000482563 SMARCC1Q92922 1105 aaPredicted RBP8.71□□□□□ -1.02
RBM39-233ENST00000482563 KIAA1191Q96A73 305 aa8.71□□□□□ -1.02
RBM39-233ENST00000482563 ELMO3Q96BJ8 720 aa8.71□□□□□ -1.02
RBM39-233ENST00000482563 TTC14Q96N46 770 aa8.71□□□□□ -1.02
RBM39-233ENST00000482563 NRSN2Q9GZP1 204 aa8.71□□□□□ -1.02
RBM39-233ENST00000482563 GBP3Q9H0R5 595 aa8.71□□□□□ -1.02
RBM39-233ENST00000482563 SMC4Q9NTJ3 1288 aa8.71□□□□□ -1.02
RBM39-233ENST00000482563 WHRNQ9P202 907 aa8.71□□□□□ -1.02
RBM39-233ENST00000482563 CGGBP1Q9UFW8 167 aaPredicted RBP8.71□□□□□ -1.02
RBM39-233ENST00000482563 KCNG1Q9UIX4 513 aa8.71□□□□□ -1.02
RBM39-233ENST00000482563 DIS3Q9Y2L1 958 aaKnown RBP8.71□□□□□ -1.02
RBM39-233ENST00000482563 ERBB4Q15303 1308 aa8.71□□□□□ -1.02
RBM39-233ENST00000482563 TUSC2O75896 110 aa8.7□□□□□ -1.02
RBM39-233ENST00000482563 CD247P20963 164 aa8.7□□□□□ -1.02
RBM39-233ENST00000482563 CALRP27797 417 aaKnown RBP8.7□□□□□ -1.02
RBM39-233ENST00000482563 PPM1AP35813 382 aa8.7□□□□□ -1.02
RBM39-233ENST00000482563 ACAP2Q15057 778 aa8.7□□□□□ -1.02
RBM39-233ENST00000482563 SPECC1Q5M775 1068 aa8.7□□□□□ -1.02
RBM39-233ENST00000482563 GPATCH4Q5T3I0 446 aaKnown RBP8.7□□□□□ -1.02
RBM39-233ENST00000482563 TXNDC11Q6PKC3 985 aa8.7□□□□□ -1.02
RBM39-233ENST00000482563 MS4A5Q9H3V2 200 aa8.7□□□□□ -1.02
RBM39-233ENST00000482563 SMYD2Q9NRG4 433 aa8.7□□□□□ -1.02
RBM39-233ENST00000482563 CSADQ9Y600 493 aa8.7□□□□□ -1.02
RBM39-233ENST00000482563 FAM155AB1AL88 458 aaPredicted RBP8.69□□□□□ -1.02
RBM39-233ENST00000482563 ARVCFO00192 962 aa8.69□□□□□ -1.02
RBM39-233ENST00000482563 SMNDC1O75940 238 aaKnown RBP eCLIP8.69□□□□□ -1.028e-11■■■■■ 32.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms