RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 USP17L2Q6R6M4 530 aa16.62■□□□□ 0.25
ATG4B-220ENST00000482507 P2RX5Q93086 422 aa16.62■□□□□ 0.25
ATG4B-220ENST00000482507 DHTKD1Q96HY7 919 aaPredicted RBP16.62■□□□□ 0.25
ATG4B-220ENST00000482507 MMS19Q96T76 1030 aa16.62■□□□□ 0.25
ATG4B-220ENST00000482507 HAUS4Q9H6D7 363 aa16.62■□□□□ 0.25
ATG4B-220ENST00000482507 EXOC1Q9NV70 894 aa16.62■□□□□ 0.25
ATG4B-220ENST00000482507 DUSP10Q9Y6W6 482 aa16.62■□□□□ 0.25
ATG4B-220ENST00000482507 LAD1O00515 517 aa16.61■□□□□ 0.25
ATG4B-220ENST00000482507 CCNE1P24864 410 aa16.61■□□□□ 0.25
ATG4B-220ENST00000482507 NAPAP54920 295 aa16.61■□□□□ 0.25
ATG4B-220ENST00000482507 PPP4CP60510 307 aa16.61■□□□□ 0.25
ATG4B-220ENST00000482507 PDE4DQ08499 809 aa16.61■□□□□ 0.25
ATG4B-220ENST00000482507 STIM1Q13586 685 aa16.61■□□□□ 0.25
ATG4B-220ENST00000482507 CCDC178Q5BJE1 867 aa16.61■□□□□ 0.25
ATG4B-220ENST00000482507 CCDC122Q5T0U0 273 aa16.61■□□□□ 0.25
ATG4B-220ENST00000482507 CNOT6LQ96LI5 555 aaKnown RBP16.61■□□□□ 0.25
ATG4B-220ENST00000482507 SYT17Q9BSW7 474 aa16.61■□□□□ 0.25
ATG4B-220ENST00000482507 MAGEC2Q9UBF1 373 aaPredicted RBP16.61■□□□□ 0.25
ATG4B-220ENST00000482507 TECP42680 631 aa16.61■□□□□ 0.25
ATG4B-220ENST00000482507 TMED8Q6PL24 325 aaPredicted RBP16.61■□□□□ 0.25
ATG4B-220ENST00000482507 PODNQ7Z5L7 613 aa16.61■□□□□ 0.25
ATG4B-220ENST00000482507 RNF216Q9NWF9 866 aaPredicted RBP16.61■□□□□ 0.25
ATG4B-220ENST00000482507 CALCOCO1Q9P1Z2 691 aa16.61■□□□□ 0.25
ATG4B-220ENST00000482507 MYH1P12882 1939 aa16.6■□□□□ 0.25
ATG4B-220ENST00000482507 SMCO2A6NFE2 343 aa16.6■□□□□ 0.25
ATG4B-220ENST00000482507 LRRIQ3A6PVS8 624 aaPredicted RBP16.6■□□□□ 0.25
ATG4B-220ENST00000482507 NFKBIEO00221 500 aa16.6■□□□□ 0.25
ATG4B-220ENST00000482507 RAD17O75943 681 aa16.6■□□□□ 0.25
ATG4B-220ENST00000482507 SCNN1DP51172 638 aa16.6■□□□□ 0.25
ATG4B-220ENST00000482507 ASIC1P78348 528 aa16.6■□□□□ 0.25
ATG4B-220ENST00000482507 RASSF7Q02833 373 aa16.6■□□□□ 0.25
ATG4B-220ENST00000482507 TBC1D8BQ0IIM8 1120 aa16.6■□□□□ 0.25
ATG4B-220ENST00000482507 KIAA0895Q8NCT3 520 aa16.6■□□□□ 0.25
ATG4B-220ENST00000482507 PSMD1Q99460 953 aa16.6■□□□□ 0.25
ATG4B-220ENST00000482507 C7orf25Q9BPX7 421 aa16.6■□□□□ 0.25
ATG4B-220ENST00000482507 SPZ1Q9BXG8 430 aa16.6■□□□□ 0.25
ATG4B-220ENST00000482507 NAV1Q8NEY1 1877 aa16.6■□□□□ 0.25
ATG4B-220ENST00000482507 ERLIN1O75477 346 aa16.6■□□□□ 0.25
ATG4B-220ENST00000482507 CDK8P49336 464 aa16.6■□□□□ 0.25
ATG4B-220ENST00000482507 CYP27A1Q02318 531 aa16.6■□□□□ 0.25
ATG4B-220ENST00000482507 CASP8Q14790 479 aa16.6■□□□□ 0.25
ATG4B-220ENST00000482507 NONOQ15233 471 aaKnown RBP eCLIP16.6■□□□□ 0.252e-6■■■□□ 14.8
ATG4B-220ENST00000482507 PAPD7Q5XG87 772 aaKnown RBP16.6■□□□□ 0.25
ATG4B-220ENST00000482507 SUPT20HQ8NEM7 779 aa16.6■□□□□ 0.25
ATG4B-220ENST00000482507 SEMA6BQ9H3T3 888 aa16.6■□□□□ 0.25
ATG4B-220ENST00000482507 NHEJ1Q9H9Q4 299 aaPredicted RBP16.6■□□□□ 0.25
ATG4B-220ENST00000482507 TMEM260Q9NX78 707 aa16.6■□□□□ 0.25
ATG4B-220ENST00000482507 ZNF263O14978 683 aa16.59■□□□□ 0.25
ATG4B-220ENST00000482507 ZBTB22O15209 634 aa16.59■□□□□ 0.25
ATG4B-220ENST00000482507 TRIM21P19474 475 aaKnown RBP16.59■□□□□ 0.25
ATG4B-220ENST00000482507 TUBB4BP68371 445 aa16.59■□□□□ 0.25
ATG4B-220ENST00000482507 KRT25Q7Z3Z0 450 aa16.59■□□□□ 0.25
ATG4B-220ENST00000482507 KIAA0825Q8IV33 1275 aa16.59■□□□□ 0.25
ATG4B-220ENST00000482507 NOC3LQ8WTT2 800 aaKnown RBP16.59■□□□□ 0.25
ATG4B-220ENST00000482507 JAKMIP2Q96AA8 810 aa16.59■□□□□ 0.25
ATG4B-220ENST00000482507 AK8Q96MA6 479 aa16.59■□□□□ 0.25
ATG4B-220ENST00000482507 CUEDC2Q9H467 287 aa16.59■□□□□ 0.25
ATG4B-220ENST00000482507 VAT1LQ9HCJ6 419 aa16.59■□□□□ 0.25
ATG4B-220ENST00000482507 VPS18Q9P253 973 aa16.59■□□□□ 0.25
ATG4B-220ENST00000482507 DDX60LQ5H9U9 1706 aaKnown RBP16.59■□□□□ 0.25
ATG4B-220ENST00000482507 KIF13BQ9NQT8 1826 aa16.59■□□□□ 0.25
ATG4B-220ENST00000482507 EDIL3O43854 480 aa16.59■□□□□ 0.25
ATG4B-220ENST00000482507 BAG3O95817 575 aa16.59■□□□□ 0.25
ATG4B-220ENST00000482507 PLEKP08567 350 aaPredicted RBP16.59■□□□□ 0.25
ATG4B-220ENST00000482507 PRELPP51888 382 aa16.59■□□□□ 0.25
ATG4B-220ENST00000482507 POTEDQ86YR6 584 aa16.59■□□□□ 0.25
ATG4B-220ENST00000482507 TXLNBQ8N3L3 684 aa16.59■□□□□ 0.25
ATG4B-220ENST00000482507 TBCKQ8TEA7 893 aa16.59■□□□□ 0.25
ATG4B-220ENST00000482507 PIGSQ96S52 555 aa16.59■□□□□ 0.25
ATG4B-220ENST00000482507 TAOK3Q9H2K8 898 aa16.59■□□□□ 0.25
ATG4B-220ENST00000482507 BIN2Q9UBW5 565 aaPredicted RBP16.59■□□□□ 0.25
ATG4B-220ENST00000482507 EPHB6O15197 1021 aa16.58■□□□□ 0.25
ATG4B-220ENST00000482507 USP14P54578 494 aa16.58■□□□□ 0.25
ATG4B-220ENST00000482507 WDR93Q6P2C0 686 aa16.58■□□□□ 0.25
ATG4B-220ENST00000482507 NEK8Q86SG6 692 aa16.58■□□□□ 0.25
ATG4B-220ENST00000482507 MSL3Q8N5Y2 521 aaKnown RBP16.58■□□□□ 0.25
ATG4B-220ENST00000482507 EXOC4Q96A65 974 aa16.58■□□□□ 0.25
ATG4B-220ENST00000482507 CAPZA3Q96KX2 299 aa16.58■□□□□ 0.25
ATG4B-220ENST00000482507 SLC39A2Q9NP94 309 aa16.58■□□□□ 0.25
ATG4B-220ENST00000482507 PCDHAC2Q9Y5I4 1007 aa16.58■□□□□ 0.25
ATG4B-220ENST00000482507 SAR1BQ9Y6B6 198 aa16.58■□□□□ 0.25
ATG4B-220ENST00000482507 PDE2AO00408 941 aaPredicted RBP16.58■□□□□ 0.24
ATG4B-220ENST00000482507 ZNF185O15231 689 aa16.58■□□□□ 0.24
ATG4B-220ENST00000482507 BTDP43251 543 aa16.58■□□□□ 0.24
ATG4B-220ENST00000482507 MTIF2P46199 727 aaKnown RBP16.58■□□□□ 0.24
ATG4B-220ENST00000482507 ZBED6P86452 979 aa16.58■□□□□ 0.24
ATG4B-220ENST00000482507 TSR1Q2NL82 804 aaKnown RBP16.58■□□□□ 0.24
ATG4B-220ENST00000482507 ZNF662Q6ZS27 426 aa16.58■□□□□ 0.24
ATG4B-220ENST00000482507 C16orf86Q6ZW13 317 aa16.58■□□□□ 0.24
ATG4B-220ENST00000482507 KIAA1328Q86T90 577 aa16.58■□□□□ 0.24
ATG4B-220ENST00000482507 ZSCAN29Q8IWY8 852 aaPredicted RBP16.58■□□□□ 0.24
ATG4B-220ENST00000482507 LZTS2Q9BRK4 669 aa16.58■□□□□ 0.24
ATG4B-220ENST00000482507 NOC4LQ9BVI4 516 aaKnown RBP16.58■□□□□ 0.24
ATG4B-220ENST00000482507 UBA5Q9GZZ9 404 aa16.58■□□□□ 0.24
ATG4B-220ENST00000482507 MAGEF1Q9HAY2 307 aa16.58■□□□□ 0.24
ATG4B-220ENST00000482507 BLOC1S4Q9NUP1 217 aa16.58■□□□□ 0.24
ATG4B-220ENST00000482507 FAN1Q9Y2M0 1017 aa16.58■□□□□ 0.24
ATG4B-220ENST00000482507 LMAN1P49257 510 aa16.57■□□□□ 0.24
ATG4B-220ENST00000482507 NT5C2P49902 561 aa16.57■□□□□ 0.24
ATG4B-220ENST00000482507 GSTO1P78417 241 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms