RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 PALMO75781 387 aa14.05□□□□□ -0.16
VPS52-218ENST00000482399 KLHL30Q0D2K2 578 aa14.05□□□□□ -0.16
VPS52-218ENST00000482399 KRT79Q5XKE5 535 aa14.05□□□□□ -0.16
VPS52-218ENST00000482399 CCDC170Q8IYT3 715 aa14.05□□□□□ -0.16
VPS52-218ENST00000482399 ZIM3Q96PE6 472 aa14.05□□□□□ -0.16
VPS52-218ENST00000482399 CARD10Q9BWT7 1032 aa14.05□□□□□ -0.16
VPS52-218ENST00000482399 C6orf50Q9HD87 102 aa14.05□□□□□ -0.16
VPS52-218ENST00000482399 PNPLA7Q6ZV29 1317 aa14.05□□□□□ -0.16
VPS52-218ENST00000482399 MPHOSPH10O00566 681 aaKnown RBP14.05□□□□□ -0.16
VPS52-218ENST00000482399 TRAPPC10P48553 1259 aa14.05□□□□□ -0.16
VPS52-218ENST00000482399 SLC20A2Q08357 652 aa14.05□□□□□ -0.16
VPS52-218ENST00000482399 ERFEQ4G0M1 354 aa14.05□□□□□ -0.16
VPS52-218ENST00000482399 MMS22LQ6ZRQ5 1243 aa14.05□□□□□ -0.16
VPS52-218ENST00000482399 FAM133AQ8N9E0 248 aa14.05□□□□□ -0.16
VPS52-218ENST00000482399 CELF1Q92879 486 aaKnown RBP14.05□□□□□ -0.16
VPS52-218ENST00000482399 COA7Q96BR5 231 aa14.05□□□□□ -0.16
VPS52-218ENST00000482399 DHTKD1Q96HY7 919 aaPredicted RBP14.05□□□□□ -0.16
VPS52-218ENST00000482399 DNAJC7Q99615 494 aa14.05□□□□□ -0.16
VPS52-218ENST00000482399 TRIM9Q9C026 710 aa14.05□□□□□ -0.16
VPS52-218ENST00000482399 ARHGAP20Q9P2F6 1191 aa14.05□□□□□ -0.16
VPS52-218ENST00000482399 MRC1P22897 1456 aa14.05□□□□□ -0.16
VPS52-218ENST00000482399 FGFR1OPO95684 399 aaKnown RBP14.05□□□□□ -0.16
VPS52-218ENST00000482399 CRKLP46109 303 aaKnown RBP14.05□□□□□ -0.16
VPS52-218ENST00000482399 PAK2Q13177 524 aa14.05□□□□□ -0.16
VPS52-218ENST00000482399 PAPD7Q5XG87 772 aaKnown RBP14.05□□□□□ -0.16
VPS52-218ENST00000482399 TTI2Q6NXR4 508 aa14.05□□□□□ -0.16
VPS52-218ENST00000482399 DDX42Q86XP3 938 aaKnown RBP eCLIP14.05□□□□□ -0.16
VPS52-218ENST00000482399 SLC4A9Q96Q91 983 aa14.05□□□□□ -0.16
VPS52-218ENST00000482399 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.05□□□□□ -0.162e-6■■■■■ 142.8
VPS52-218ENST00000482399 AFDNP55196 1824 aaKnown RBP14.04□□□□□ -0.16
VPS52-218ENST00000482399 FRMD3A2A2Y4 597 aa14.04□□□□□ -0.16
VPS52-218ENST00000482399 LRRC10BA6NIK2 292 aa14.04□□□□□ -0.16
VPS52-218ENST00000482399 ACTN3Q08043 901 aaPredicted RBP14.04□□□□□ -0.16
VPS52-218ENST00000482399 CALCRLQ16602 461 aa14.04□□□□□ -0.16
VPS52-218ENST00000482399 VWA3BQ502W6 1294 aa14.04□□□□□ -0.16
VPS52-218ENST00000482399 HERC4Q5GLZ8 1057 aaPredicted RBP14.04□□□□□ -0.16
VPS52-218ENST00000482399 CCDC121Q6ZUS5 278 aa14.04□□□□□ -0.16
VPS52-218ENST00000482399 ZNF512BQ96KM6 892 aaPredicted RBP14.04□□□□□ -0.16
VPS52-218ENST00000482399 FAM153BP0C7A2 387 aa14.04□□□□□ -0.16
VPS52-218ENST00000482399 TRADDQ15628 312 aa14.04□□□□□ -0.16
VPS52-218ENST00000482399 FAM153CQ494X1 144 aa14.04□□□□□ -0.16
VPS52-218ENST00000482399 SFMBT2Q5VUG0 894 aa14.04□□□□□ -0.16
VPS52-218ENST00000482399 GBP6Q6ZN66 633 aa14.04□□□□□ -0.16
VPS52-218ENST00000482399 MICALCLQ6ZW33 695 aa14.04□□□□□ -0.16
VPS52-218ENST00000482399 B4GALNT4Q76KP1 1039 aa14.04□□□□□ -0.16
VPS52-218ENST00000482399 CPLX4Q7Z7G2 160 aa14.04□□□□□ -0.16
VPS52-218ENST00000482399 CCDC84Q86UT8 332 aaPredicted RBP14.04□□□□□ -0.16
VPS52-218ENST00000482399 KSR1Q8IVT5 923 aa14.04□□□□□ -0.16
VPS52-218ENST00000482399 FNBP4Q8N3X1 1017 aaPredicted RBP14.04□□□□□ -0.16
VPS52-218ENST00000482399 VIPAS39Q9H9C1 493 aa14.04□□□□□ -0.16
VPS52-218ENST00000482399 CCDC87Q9NVE4 849 aa14.04□□□□□ -0.16
VPS52-218ENST00000482399 FAM153AQ9UHL3 310 aa14.04□□□□□ -0.16
VPS52-218ENST00000482399 SRCAPQ6ZRS2 3230 aa14.04□□□□□ -0.16
VPS52-218ENST00000482399 PDS5AQ29RF7 1337 aaKnown RBP14.04□□□□□ -0.16
VPS52-218ENST00000482399 A0A1W2PQC6 194 aa14.03□□□□□ -0.16
VPS52-218ENST00000482399 EIF3HO15372 352 aaKnown RBP eCLIP14.03□□□□□ -0.16
VPS52-218ENST00000482399 NR1D1P20393 614 aa14.03□□□□□ -0.16
VPS52-218ENST00000482399 CTNNA1P35221 906 aaKnown RBP14.03□□□□□ -0.16
VPS52-218ENST00000482399 MAP2K2P36507 400 aa14.03□□□□□ -0.16
VPS52-218ENST00000482399 GNAQP50148 359 aa14.03□□□□□ -0.16
VPS52-218ENST00000482399 E2F5Q15329 346 aa14.03□□□□□ -0.16
VPS52-218ENST00000482399 NAALADL2Q58DX5 795 aa14.03□□□□□ -0.16
VPS52-218ENST00000482399 POTEDQ86YR6 584 aa14.03□□□□□ -0.16
VPS52-218ENST00000482399 DUSP9Q99956 384 aaKnown RBP14.03□□□□□ -0.16
VPS52-218ENST00000482399 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.03□□□□□ -0.16
VPS52-218ENST00000482399 ARHGAP23Q9P227 1491 aa14.03□□□□□ -0.16
VPS52-218ENST00000482399 ECM2O94769 699 aaPredicted RBP14.03□□□□□ -0.16
VPS52-218ENST00000482399 ARL6IP4Q66PJ3 421 aaKnown RBP14.03□□□□□ -0.16
VPS52-218ENST00000482399 SELENOSQ9BQE4 189 aa14.03□□□□□ -0.16
VPS52-218ENST00000482399 ZNF652Q9Y2D9 606 aa14.03□□□□□ -0.16
VPS52-218ENST00000482399 LAMA4Q16363 1823 aa14.03□□□□□ -0.16
VPS52-218ENST00000482399 AGPSO00116 658 aa14.03□□□□□ -0.16
VPS52-218ENST00000482399 ZNF263O14978 683 aa14.03□□□□□ -0.16
VPS52-218ENST00000482399 GLI1P08151 1106 aa14.03□□□□□ -0.16
VPS52-218ENST00000482399 NEK8Q86SG6 692 aa14.03□□□□□ -0.16
VPS52-218ENST00000482399 NBPF5PQ86XG9 351 aaPredicted RBP14.03□□□□□ -0.16
VPS52-218ENST00000482399 CREG2Q8IUH2 290 aa14.03□□□□□ -0.16
VPS52-218ENST00000482399 REXO1Q8N1G1 1221 aaKnown RBP14.03□□□□□ -0.16
VPS52-218ENST00000482399 LRRC47Q8N1G4 583 aaKnown RBP14.03□□□□□ -0.16
VPS52-218ENST00000482399 MARCH10Q8NA82 808 aaPredicted RBP14.03□□□□□ -0.16
VPS52-218ENST00000482399 GIMAP8Q8ND71 665 aaPredicted RBP14.03□□□□□ -0.16
VPS52-218ENST00000482399 GLIS3Q8NEA6 775 aa14.03□□□□□ -0.16
VPS52-218ENST00000482399 CABS1Q96KC9 395 aa14.03□□□□□ -0.16
VPS52-218ENST00000482399 RNPC3Q96LT9 517 aaKnown RBP14.03□□□□□ -0.16
VPS52-218ENST00000482399 PIGSQ96S52 555 aa14.03□□□□□ -0.16
VPS52-218ENST00000482399 RIOK1Q9BRS2 568 aaKnown RBP14.03□□□□□ -0.16
VPS52-218ENST00000482399 PCDHA6Q9UN73 950 aa14.03□□□□□ -0.16
VPS52-218ENST00000482399 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.03□□□□□ -0.16
VPS52-218ENST00000482399 PCDHA8Q9Y5H6 950 aa14.03□□□□□ -0.16
VPS52-218ENST00000482399 LDHBP07195 334 aaKnown RBP14.02□□□□□ -0.16
VPS52-218ENST00000482399 FUT2Q10981 343 aa14.02□□□□□ -0.16
VPS52-218ENST00000482399 MTMR8Q96EF0 704 aa14.02□□□□□ -0.16
VPS52-218ENST00000482399 RAB34Q9BZG1 259 aa14.02□□□□□ -0.16
VPS52-218ENST00000482399 SH2D4AQ9H788 454 aa14.02□□□□□ -0.16
VPS52-218ENST00000482399 ANO9A1A5B4 782 aa14.02□□□□□ -0.17
VPS52-218ENST00000482399 TARSL2A2RTX5 802 aaKnown RBP14.02□□□□□ -0.17
VPS52-218ENST00000482399 PRPF6O94906 941 aaKnown RBP14.02□□□□□ -0.17
VPS52-218ENST00000482399 GNA11P29992 359 aa14.02□□□□□ -0.17
VPS52-218ENST00000482399 IL6STP40189 918 aaPredicted RBP14.02□□□□□ -0.17
VPS52-218ENST00000482399 RPS6KA1Q15418 735 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms