RNA–Protein interactions for RNA: ENST00000481484.1

VPS13D-208, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 360 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-208ENST00000481484 ACAD9Q9H845 621 aa4.91□□□□□ -1.62
VPS13D-208ENST00000481484 SPC25Q9HBM1 224 aa4.91□□□□□ -1.62
VPS13D-208ENST00000481484 SLC38A10Q9HBR0 1119 aa4.91□□□□□ -1.62
VPS13D-208ENST00000481484 EPB41L4AQ9HCS5 686 aaPredicted RBP4.91□□□□□ -1.62
VPS13D-208ENST00000481484 MTMR4Q9NYA4 1195 aa4.91□□□□□ -1.62
VPS13D-208ENST00000481484 ZMYND8Q9ULU4 1186 aaPredicted RBP4.91□□□□□ -1.62
VPS13D-208ENST00000481484 PHF24Q9UPV7 400 aa4.91□□□□□ -1.62
VPS13D-208ENST00000481484 BRWD1Q9NSI6 2320 aa4.91□□□□□ -1.62
VPS13D-208ENST00000481484 SALL3Q9BXA9 1300 aa4.91□□□□□ -1.62
VPS13D-208ENST00000481484 GBF1Q92538 1859 aa4.9□□□□□ -1.62
VPS13D-208ENST00000481484 PATL2C9JE40 543 aaKnown RBP4.9□□□□□ -1.63
VPS13D-208ENST00000481484 CAPN5O15484 640 aaPredicted RBP4.9□□□□□ -1.63
VPS13D-208ENST00000481484 PRKAB2O43741 272 aa4.9□□□□□ -1.63
VPS13D-208ENST00000481484 ORC4O43929 436 aa4.9□□□□□ -1.63
VPS13D-208ENST00000481484 RAD21O60216 631 aa4.9□□□□□ -1.63
VPS13D-208ENST00000481484 ZBED4O75132 1171 aa4.9□□□□□ -1.63
VPS13D-208ENST00000481484 AP1G2O75843 785 aa4.9□□□□□ -1.63
VPS13D-208ENST00000481484 ADH1CP00326 375 aa4.9□□□□□ -1.63
VPS13D-208ENST00000481484 APPP05067 770 aa4.9□□□□□ -1.63
VPS13D-208ENST00000481484 BMP3P12645 472 aa4.9□□□□□ -1.63
VPS13D-208ENST00000481484 CYP2C19P33261 490 aa4.9□□□□□ -1.63
VPS13D-208ENST00000481484 RFC5P40937 340 aa4.9□□□□□ -1.63
VPS13D-208ENST00000481484 PPARAQ07869 468 aa4.9□□□□□ -1.63
VPS13D-208ENST00000481484 NR5A1Q13285 461 aa4.9□□□□□ -1.63
VPS13D-208ENST00000481484 NNTQ13423 1086 aa4.9□□□□□ -1.63
VPS13D-208ENST00000481484 AGERQ15109 404 aa4.9□□□□□ -1.63
VPS13D-208ENST00000481484 LRRC41Q15345 812 aa4.9□□□□□ -1.63
VPS13D-208ENST00000481484 NR6A1Q15406 480 aa4.9□□□□□ -1.63
VPS13D-208ENST00000481484 LRRC26Q2I0M4 334 aa4.9□□□□□ -1.63
VPS13D-208ENST00000481484 ZNF792Q3KQV3 632 aa4.9□□□□□ -1.63
VPS13D-208ENST00000481484 TPRNQ4KMQ1 711 aa4.9□□□□□ -1.63
VPS13D-208ENST00000481484 FAM47AQ5JRC9 791 aa4.9□□□□□ -1.63
VPS13D-208ENST00000481484 ZMYM1Q5SVZ6 1142 aa4.9□□□□□ -1.63
VPS13D-208ENST00000481484 C20orf194Q5TEA3 1177 aa4.9□□□□□ -1.63
VPS13D-208ENST00000481484 PDXDC2PQ6P474 469 aa4.9□□□□□ -1.63
VPS13D-208ENST00000481484 MAMDC4Q6UXC1 1216 aa4.9□□□□□ -1.63
VPS13D-208ENST00000481484 ZNF444Q8N0Y2 327 aaPredicted RBP4.9□□□□□ -1.63
VPS13D-208ENST00000481484 PCSK9Q8NBP7 692 aaKnown RBP4.9□□□□□ -1.63
VPS13D-208ENST00000481484 NPLOC4Q8TAT6 608 aa4.9□□□□□ -1.63
VPS13D-208ENST00000481484 PI4K2BQ8TCG2 481 aa4.9□□□□□ -1.63
VPS13D-208ENST00000481484 CHURC1Q8WUH1 139 aa4.9□□□□□ -1.63
VPS13D-208ENST00000481484 DCAF4Q8WV16 495 aa4.9□□□□□ -1.63
VPS13D-208ENST00000481484 OSBP2Q969R2 916 aa4.9□□□□□ -1.63
VPS13D-208ENST00000481484 MKL1Q969V6 931 aa4.9□□□□□ -1.63
VPS13D-208ENST00000481484 CEP95Q96GE4 821 aa4.9□□□□□ -1.63
VPS13D-208ENST00000481484 TOX2Q96NM4 488 aa4.9□□□□□ -1.63
VPS13D-208ENST00000481484 MPHOSPH6Q99547 160 aaKnown RBP4.9□□□□□ -1.63
VPS13D-208ENST00000481484 MAF1Q9H063 256 aa4.9□□□□□ -1.63
VPS13D-208ENST00000481484 ABHD16BQ9H3Z7 469 aa4.9□□□□□ -1.63
VPS13D-208ENST00000481484 SENP2Q9HC62 589 aa4.9□□□□□ -1.63
VPS13D-208ENST00000481484 XPNPEP3Q9NQH7 507 aa4.9□□□□□ -1.63
VPS13D-208ENST00000481484 HELLSQ9NRZ9 838 aa4.9□□□□□ -1.63
VPS13D-208ENST00000481484 FLRT1Q9NZU1 646 aa4.9□□□□□ -1.63
VPS13D-208ENST00000481484 STAP2Q9UGK3 403 aa4.9□□□□□ -1.63
VPS13D-208ENST00000481484 FKBPLQ9UIM3 349 aa4.9□□□□□ -1.63
VPS13D-208ENST00000481484 ANAPC4Q9UJX5 808 aa4.9□□□□□ -1.63
VPS13D-208ENST00000481484 VCANP13611 3396 aa4.9□□□□□ -1.63
VPS13D-208ENST00000481484 DNAJC25-GNG10A0A024R161 153 aa4.89□□□□□ -1.63
VPS13D-208ENST00000481484 CYP2D7A0A087X1C5 515 aa4.89□□□□□ -1.63
VPS13D-208ENST00000481484 ASB14A6NK59 587 aa4.89□□□□□ -1.63
VPS13D-208ENST00000481484 TSPY2A6NKD2 308 aa4.89□□□□□ -1.63
VPS13D-208ENST00000481484 MINDY4BA8MYZ0 360 aa4.89□□□□□ -1.63
VPS13D-208ENST00000481484 F5H6K3 240 aa4.89□□□□□ -1.63
VPS13D-208ENST00000481484 M0R2C6 588 aa4.89□□□□□ -1.63
VPS13D-208ENST00000481484 HIP1O00291 1037 aa4.89□□□□□ -1.63
VPS13D-208ENST00000481484 SMARCA5O60264 1052 aaPredicted RBP4.89□□□□□ -1.63
VPS13D-208ENST00000481484 PEX10O60683 326 aa4.89□□□□□ -1.63
VPS13D-208ENST00000481484 COBLO75128 1261 aa4.89□□□□□ -1.63
VPS13D-208ENST00000481484 DUSP11O75319 330 aaKnown RBP4.89□□□□□ -1.63
VPS13D-208ENST00000481484 CABYRO75952 493 aa4.89□□□□□ -1.63
VPS13D-208ENST00000481484 CLTBP09497 229 aa4.89□□□□□ -1.63
VPS13D-208ENST00000481484 SNRPBP14678 240 aaKnown RBP4.89□□□□□ -1.63
VPS13D-208ENST00000481484 SLC1A4P43007 532 aa4.89□□□□□ -1.63
VPS13D-208ENST00000481484 KLRC3Q07444 240 aa4.89□□□□□ -1.63
VPS13D-208ENST00000481484 IKQ13123 557 aaPredicted RBP4.89□□□□□ -1.63
VPS13D-208ENST00000481484 ALX1Q15699 326 aa4.89□□□□□ -1.63
VPS13D-208ENST00000481484 CCDC178Q5BJE1 867 aa4.89□□□□□ -1.63
VPS13D-208ENST00000481484 KIAA1755Q5JYT7 1200 aa4.89□□□□□ -1.63
VPS13D-208ENST00000481484 SLFN13Q68D06 897 aa4.89□□□□□ -1.63
VPS13D-208ENST00000481484 CCDC129Q6ZRS4 1044 aa4.89□□□□□ -1.63
VPS13D-208ENST00000481484 TRIM46Q7Z4K8 759 aa4.89□□□□□ -1.63
VPS13D-208ENST00000481484 SIAH1Q8IUQ4 282 aa4.89□□□□□ -1.63
VPS13D-208ENST00000481484 IFNL3Q8IZI9 196 aa4.89□□□□□ -1.63
VPS13D-208ENST00000481484 ANKRD35Q8N283 1001 aa4.89□□□□□ -1.63
VPS13D-208ENST00000481484 TRPV1Q8NER1 839 aa4.89□□□□□ -1.63
VPS13D-208ENST00000481484 KIFC2Q96AC6 838 aa4.89□□□□□ -1.63
VPS13D-208ENST00000481484 DDX11Q96FC9 970 aa4.89□□□□□ -1.63
VPS13D-208ENST00000481484 PCMTD1Q96MG8 357 aaPredicted RBP4.89□□□□□ -1.63
VPS13D-208ENST00000481484 SENP6Q9GZR1 1112 aaPredicted RBP4.89□□□□□ -1.63
VPS13D-208ENST00000481484 UPF3AQ9H1J1 476 aaKnown RBP4.89□□□□□ -1.63
VPS13D-208ENST00000481484 MTIF3Q9H2K0 278 aaKnown RBP4.89□□□□□ -1.63
VPS13D-208ENST00000481484 RNF41Q9H4P4 317 aaPredicted RBP4.89□□□□□ -1.63
VPS13D-208ENST00000481484 PDLIM7Q9NR12 457 aa4.89□□□□□ -1.63
VPS13D-208ENST00000481484 FBXO28Q9NVF7 368 aa4.89□□□□□ -1.63
VPS13D-208ENST00000481484 FAM184BQ9ULE4 1060 aa4.89□□□□□ -1.63
VPS13D-208ENST00000481484 ATP11BQ9Y2G3 1177 aa4.89□□□□□ -1.63
VPS13D-208ENST00000481484 STXBP5LQ9Y2K9 1186 aa4.89□□□□□ -1.63
VPS13D-208ENST00000481484 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.89□□□□□ -1.63
VPS13D-208ENST00000481484 MAP4K5Q9Y4K4 846 aa4.89□□□□□ -1.63
VPS13D-208ENST00000481484 TACC3Q9Y6A5 838 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms