RNA–Protein interactions for RNA: ENST00000481385.6

PHF3-204, Transcript of PHD finger protein 3, humanhuman

TSL 2

Gene PHF3, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-204ENST00000481385 MYH4Q9Y623 1939 aa15.71■□□□□ 0.11
PHF3-204ENST00000481385 USP17L15C9J2P7 530 aa15.71■□□□□ 0.11
PHF3-204ENST00000481385 USP17L13C9JLJ4 530 aa15.71■□□□□ 0.11
PHF3-204ENST00000481385 USP17L11C9JVI0 530 aa15.71■□□□□ 0.11
PHF3-204ENST00000481385 USP17L18D6R9N7 530 aa15.71■□□□□ 0.11
PHF3-204ENST00000481385 USP17L22D6RA61 530 aa15.71■□□□□ 0.11
PHF3-204ENST00000481385 USP17L17D6RBQ6 530 aa15.71■□□□□ 0.11
PHF3-204ENST00000481385 USP17L19D6RCP7 530 aa15.71■□□□□ 0.11
PHF3-204ENST00000481385 USP17L20D6RJB6 530 aa15.71■□□□□ 0.11
PHF3-204ENST00000481385 PNMA6AP0CW24 399 aaPredicted RBP15.71■□□□□ 0.11
PHF3-204ENST00000481385 ERCC3P19447 782 aa15.71■□□□□ 0.11
PHF3-204ENST00000481385 HERVK_113P62684 666 aa15.71■□□□□ 0.11
PHF3-204ENST00000481385 USP17L24Q0WX57 530 aa15.71■□□□□ 0.11
PHF3-204ENST00000481385 USP17L6PQ6QN14 398 aa15.71■□□□□ 0.11
PHF3-204ENST00000481385 NLGN1Q8N2Q7 840 aa15.71■□□□□ 0.11
PHF3-204ENST00000481385 RAD54LQ92698 747 aa15.71■□□□□ 0.11
PHF3-204ENST00000481385 FAM198AQ9UFP1 575 aa15.71■□□□□ 0.11
PHF3-204ENST00000481385 DDX25Q9UHL0 483 aaKnown RBP15.71■□□□□ 0.11
PHF3-204ENST00000481385 MYO3BQ8WXR4 1341 aa15.71■□□□□ 0.11
PHF3-204ENST00000481385 DNM2P50570 870 aa15.7■□□□□ 0.1
PHF3-204ENST00000481385 AMPD3Q01432 767 aa15.7■□□□□ 0.1
PHF3-204ENST00000481385 SEMA3FQ13275 785 aa15.7■□□□□ 0.1
PHF3-204ENST00000481385 CNNM4Q6P4Q7 775 aa15.7■□□□□ 0.1
PHF3-204ENST00000481385 ZNF219Q9P2Y4 722 aaPredicted RBP15.7■□□□□ 0.1
PHF3-204ENST00000481385 BICDL2A1A5D9 508 aa15.7■□□□□ 0.1
PHF3-204ENST00000481385 MYH7BA7E2Y1 1941 aa15.7■□□□□ 0.1
PHF3-204ENST00000481385 G3V3G9 751 aa15.7■□□□□ 0.1
PHF3-204ENST00000481385 HLA-DOAP06340 250 aa15.7■□□□□ 0.1
PHF3-204ENST00000481385 EEF2P13639 858 aaKnown RBP15.7■□□□□ 0.1
PHF3-204ENST00000481385 TBC1D8BQ0IIM8 1120 aa15.7■□□□□ 0.1
PHF3-204ENST00000481385 SCN9AQ15858 1988 aa15.7■□□□□ 0.1
PHF3-204ENST00000481385 TMEM119Q4V9L6 283 aa15.7■□□□□ 0.1
PHF3-204ENST00000481385 DCAF8Q5TAQ9 597 aa15.7■□□□□ 0.1
PHF3-204ENST00000481385 PPP4R3AQ6IN85 833 aa15.7■□□□□ 0.1
PHF3-204ENST00000481385 CENPPQ6IPU0 288 aa15.7■□□□□ 0.1
PHF3-204ENST00000481385 UNC13DQ70J99 1090 aa15.7■□□□□ 0.1
PHF3-204ENST00000481385 C10orf71Q711Q0 1435 aa15.7■□□□□ 0.1
PHF3-204ENST00000481385 SIAH1Q8IUQ4 282 aa15.7■□□□□ 0.1
PHF3-204ENST00000481385 NOC3LQ8WTT2 800 aaKnown RBP15.7■□□□□ 0.1
PHF3-204ENST00000481385 CUL5Q93034 780 aa15.7■□□□□ 0.1
PHF3-204ENST00000481385 ZNF622Q969S3 477 aaKnown RBP eCLIP15.7■□□□□ 0.19e-7■□□□□ 10.2
PHF3-204ENST00000481385 P2RX7Q99572 595 aaKnown RBP15.7■□□□□ 0.1
PHF3-204ENST00000481385 PARD6BQ9BYG5 372 aa15.7■□□□□ 0.1
PHF3-204ENST00000481385 CDC23Q9UJX2 597 aa15.7■□□□□ 0.1
PHF3-204ENST00000481385 PRDM4Q9UKN5 801 aa15.7■□□□□ 0.1
PHF3-204ENST00000481385 TAL1P17542 331 aaPredicted RBP15.7■□□□□ 0.1
PHF3-204ENST00000481385 ALDH1B1P30837 517 aa15.7■□□□□ 0.1
PHF3-204ENST00000481385 MTIF2P46199 727 aaKnown RBP15.7■□□□□ 0.1
PHF3-204ENST00000481385 SNAP25P60880 206 aa15.7■□□□□ 0.1
PHF3-204ENST00000481385 LRRC41Q15345 812 aa15.7■□□□□ 0.1
PHF3-204ENST00000481385 TMEM266Q2M3C6 531 aa15.7■□□□□ 0.1
PHF3-204ENST00000481385 KIF4BQ2VIQ3 1234 aa15.7■□□□□ 0.1
PHF3-204ENST00000481385 PPP1R18Q6NYC8 613 aa15.7■□□□□ 0.1
PHF3-204ENST00000481385 DDX12PQ92771 950 aa15.7■□□□□ 0.1
PHF3-204ENST00000481385 MASTLQ96GX5 879 aa15.7■□□□□ 0.1
PHF3-204ENST00000481385 ZDHHC15Q96MV8 337 aa15.7■□□□□ 0.1
PHF3-204ENST00000481385 NOC4LQ9BVI4 516 aaKnown RBP15.7■□□□□ 0.1
PHF3-204ENST00000481385 PSTPIP2Q9H939 334 aa15.7■□□□□ 0.1
PHF3-204ENST00000481385 STK17AQ9UEE5 414 aa15.7■□□□□ 0.1
PHF3-204ENST00000481385 ATF5Q9Y2D1 282 aaPredicted RBP15.7■□□□□ 0.1
PHF3-204ENST00000481385 EPHB6O15197 1021 aa15.69■□□□□ 0.1
PHF3-204ENST00000481385 SASH3O75995 380 aa15.69■□□□□ 0.1
PHF3-204ENST00000481385 PDIA5Q14554 519 aa15.69■□□□□ 0.1
PHF3-204ENST00000481385 MEA1Q16626 185 aa15.69■□□□□ 0.1
PHF3-204ENST00000481385 QRICH1Q2TAL8 776 aa15.69■□□□□ 0.1
PHF3-204ENST00000481385 COBLL1Q53SF7 1204 aa15.69■□□□□ 0.1
PHF3-204ENST00000481385 GPATCH4Q5T3I0 446 aaKnown RBP15.69■□□□□ 0.1
PHF3-204ENST00000481385 ZSCAN29Q8IWY8 852 aaPredicted RBP15.69■□□□□ 0.1
PHF3-204ENST00000481385 GPR161Q8N6U8 529 aaKnown RBP15.69■□□□□ 0.1
PHF3-204ENST00000481385 CCDC47Q96A33 483 aaKnown RBP15.69■□□□□ 0.1
PHF3-204ENST00000481385 CDK5RAP3Q96JB5 506 aa15.69■□□□□ 0.1
PHF3-204ENST00000481385 FGFBP2Q9BYJ0 223 aa15.69■□□□□ 0.1
PHF3-204ENST00000481385 CTAGE9A4FU28 777 aa15.69■□□□□ 0.1
PHF3-204ENST00000481385 RCCD1A6NED2 376 aa15.69■□□□□ 0.1
PHF3-204ENST00000481385 IDEP14735 1019 aa15.69■□□□□ 0.1
PHF3-204ENST00000481385 TRIM21P19474 475 aaKnown RBP15.69■□□□□ 0.1
PHF3-204ENST00000481385 PLA2G4AP47712 749 aa15.69■□□□□ 0.1
PHF3-204ENST00000481385 CHMP4BP1P59074 171 aa15.69■□□□□ 0.1
PHF3-204ENST00000481385 EHHADHQ08426 723 aa15.69■□□□□ 0.1
PHF3-204ENST00000481385 SRGAP1Q7Z6B7 1085 aa15.69■□□□□ 0.1
PHF3-204ENST00000481385 GOLGA1Q92805 767 aa15.69■□□□□ 0.1
PHF3-204ENST00000481385 EHD4Q9H223 541 aa15.69■□□□□ 0.1
PHF3-204ENST00000481385 GUCA1BQ9UMX6 200 aa15.69■□□□□ 0.1
PHF3-204ENST00000481385 PDE6BP35913 854 aa15.68■□□□□ 0.1
PHF3-204ENST00000481385 JAG1P78504 1218 aa15.68■□□□□ 0.1
PHF3-204ENST00000481385 KRT79Q5XKE5 535 aa15.68■□□□□ 0.1
PHF3-204ENST00000481385 TMCO3Q6UWJ1 677 aa15.68■□□□□ 0.1
PHF3-204ENST00000481385 GPIHBP1Q8IV16 184 aa15.68■□□□□ 0.1
PHF3-204ENST00000481385 UTRNP46939 3433 aa15.68■□□□□ 0.1
PHF3-204ENST00000481385 ARFGEF1Q9Y6D6 1849 aa15.68■□□□□ 0.1
PHF3-204ENST00000481385 DACT2Q5SW24 774 aa15.68■□□□□ 0.1
PHF3-204ENST00000481385 CC2D1AQ6P1N0 951 aaPredicted RBP15.68■□□□□ 0.1
PHF3-204ENST00000481385 RABGGTAQ92696 567 aa15.68■□□□□ 0.1
PHF3-204ENST00000481385 ANKZF1Q9H8Y5 726 aa15.68■□□□□ 0.1
PHF3-204ENST00000481385 PVALEFA0A1B0GWK0 134 aa15.67■□□□□ 0.1
PHF3-204ENST00000481385 GDF11O95390 407 aa15.67■□□□□ 0.1
PHF3-204ENST00000481385 TBC1D8O95759 1140 aa15.67■□□□□ 0.1
PHF3-204ENST00000481385 RBM5P52756 815 aaKnown RBP eCLIP15.67■□□□□ 0.1
PHF3-204ENST00000481385 AMPD2Q01433 879 aa15.67■□□□□ 0.1
PHF3-204ENST00000481385 BMS1Q14692 1282 aaKnown RBP15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms