RNA–Protein interactions for RNA: ENST00000480923.5

VPS36-204, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-204ENST00000480923 APOA5Q6Q788 366 aa23.31■■□□□ 1.32
VPS36-204ENST00000480923 BLOC1S2Q6QNY1 142 aa23.31■■□□□ 1.32
VPS36-204ENST00000480923 MAP3K20Q9NYL2 800 aaKnown RBP23.31■■□□□ 1.32
VPS36-204ENST00000480923 RBM47A0AV96 593 aaKnown RBP23.3■■□□□ 1.32
VPS36-204ENST00000480923 GCOM1H8Y6P7 765 aaPredicted RBP23.3■■□□□ 1.32
VPS36-204ENST00000480923 CTAGE5O15320 804 aa23.3■■□□□ 1.32
VPS36-204ENST00000480923 POLR2MP0CAP2 368 aa23.3■■□□□ 1.32
VPS36-204ENST00000480923 GHRHRQ02643 423 aa23.3■■□□□ 1.32
VPS36-204ENST00000480923 FSCN1Q16658 493 aaKnown RBP23.3■■□□□ 1.32
VPS36-204ENST00000480923 C1orf53Q5VUE5 145 aa23.3■■□□□ 1.32
VPS36-204ENST00000480923 CCDC82Q8N4S0 544 aa23.3■■□□□ 1.32
VPS36-204ENST00000480923 SAMD3Q8N6K7 520 aa23.3■■□□□ 1.32
VPS36-204ENST00000480923 SCFD2Q8WU76 684 aa23.3■■□□□ 1.32
VPS36-204ENST00000480923 VTI1AQ96AJ9 217 aa23.3■■□□□ 1.32
VPS36-204ENST00000480923 GLT1D1Q96MS3 346 aa23.3■■□□□ 1.32
VPS36-204ENST00000480923 IWS1Q96ST2 819 aa23.3■■□□□ 1.32
VPS36-204ENST00000480923 PRKAG2Q9UGJ0 569 aa23.3■■□□□ 1.32
VPS36-204ENST00000480923 BRPF3Q9ULD4 1205 aa23.3■■□□□ 1.32
VPS36-204ENST00000480923 NAP1L2Q9ULW6 460 aaPredicted RBP23.3■■□□□ 1.32
VPS36-204ENST00000480923 Q9Y3F1 56 aa23.3■■□□□ 1.32
VPS36-204ENST00000480923 KLF18A0A0U1RQI7 1052 aa23.29■■□□□ 1.32
VPS36-204ENST00000480923 ZBTB43O43298 467 aa23.29■■□□□ 1.32
VPS36-204ENST00000480923 EPB41L2O43491 1005 aaKnown RBP23.29■■□□□ 1.32
VPS36-204ENST00000480923 NKX3-2P78367 333 aa23.29■■□□□ 1.32
VPS36-204ENST00000480923 PPP2R5BQ15173 497 aa23.29■■□□□ 1.32
VPS36-204ENST00000480923 STXBP2Q15833 593 aa23.29■■□□□ 1.32
VPS36-204ENST00000480923 TMTC3Q6ZXV5 915 aa23.29■■□□□ 1.32
VPS36-204ENST00000480923 PXMP2Q9NR77 195 aa23.29■■□□□ 1.32
VPS36-204ENST00000480923 RBM27Q9P2N5 1060 aaKnown RBP23.29■■□□□ 1.32
VPS36-204ENST00000480923 ZEB2O60315 1214 aa23.28■■□□□ 1.32
VPS36-204ENST00000480923 PSMA5P28066 241 aa23.28■■□□□ 1.32
VPS36-204ENST00000480923 MAGEA10P43363 369 aaPredicted RBP23.28■■□□□ 1.32
VPS36-204ENST00000480923 RTN1Q16799 776 aa23.28■■□□□ 1.32
VPS36-204ENST00000480923 Q6ZUG5 572 aa23.28■■□□□ 1.32
VPS36-204ENST00000480923 FCHSD1Q86WN1 690 aa23.28■■□□□ 1.32
VPS36-204ENST00000480923 PRDM5Q9NQX1 630 aaPredicted RBP23.28■■□□□ 1.32
VPS36-204ENST00000480923 RBM28Q9NW13 759 aaKnown RBP23.28■■□□□ 1.32
VPS36-204ENST00000480923 PCDH10Q9P2E7 1040 aa23.28■■□□□ 1.32
VPS36-204ENST00000480923 MYH6P13533 1939 aa23.27■■□□□ 1.32
VPS36-204ENST00000480923 GOLGA8AA7E2F4 631 aa23.27■■□□□ 1.32
VPS36-204ENST00000480923 GOLGA8BA8MQT2 603 aa23.27■■□□□ 1.32
VPS36-204ENST00000480923 NR3C2P08235 984 aa23.27■■□□□ 1.32
VPS36-204ENST00000480923 TXNP10599 105 aaKnown RBP23.27■■□□□ 1.32
VPS36-204ENST00000480923 TLE2Q04725 743 aa23.27■■□□□ 1.32
VPS36-204ENST00000480923 SEPT14Q6ZU15 432 aa23.27■■□□□ 1.32
VPS36-204ENST00000480923 OR6J1Q8NGC5 347 aa23.27■■□□□ 1.32
VPS36-204ENST00000480923 USP26Q9BXU7 913 aa23.27■■□□□ 1.32
VPS36-204ENST00000480923 ELP1O95163 1332 aa23.27■■□□□ 1.32
VPS36-204ENST00000480923 hCG_1642624A0A1W2PR95 340 aa23.26■■□□□ 1.31
VPS36-204ENST00000480923 NKRFO15226 690 aaKnown RBP eCLIP23.26■■□□□ 1.31
VPS36-204ENST00000480923 PQBP1O60828 265 aaKnown RBP23.26■■□□□ 1.31
VPS36-204ENST00000480923 MYCLP12524 364 aaPredicted RBP23.26■■□□□ 1.31
VPS36-204ENST00000480923 CASTP20810 708 aaKnown RBP23.26■■□□□ 1.31
VPS36-204ENST00000480923 RPS6KB1P23443 525 aa23.26■■□□□ 1.31
VPS36-204ENST00000480923 TTLL4Q14679 1199 aa23.26■■□□□ 1.31
VPS36-204ENST00000480923 CXCL17Q6UXB2 119 aa23.26■■□□□ 1.31
VPS36-204ENST00000480923 BRF1Q92994 677 aa23.26■■□□□ 1.31
VPS36-204ENST00000480923 GDF15Q99988 308 aa23.26■■□□□ 1.31
VPS36-204ENST00000480923 PRO3102Q9H379 93 aa23.26■■□□□ 1.31
VPS36-204ENST00000480923 A0A0U1RQG5 324 aaPredicted RBP23.25■■□□□ 1.31
VPS36-204ENST00000480923 MDM2Q00987 491 aaPredicted RBP23.25■■□□□ 1.31
VPS36-204ENST00000480923 APOBRQ0VD83 1088 aa23.25■■□□□ 1.31
VPS36-204ENST00000480923 COPS5Q92905 334 aa23.25■■□□□ 1.31
VPS36-204ENST00000480923 CUL5Q93034 780 aa23.25■■□□□ 1.31
VPS36-204ENST00000480923 LBHD1Q9BQE6 289 aaPredicted RBP23.25■■□□□ 1.31
VPS36-204ENST00000480923 PDCD2LQ9BRP1 358 aa23.25■■□□□ 1.31
VPS36-204ENST00000480923 CEP290O15078 2479 aa23.24■■□□□ 1.31
VPS36-204ENST00000480923 EIF3JO75822 258 aaKnown RBP23.24■■□□□ 1.31
VPS36-204ENST00000480923 CABYRO75952 493 aa23.24■■□□□ 1.31
VPS36-204ENST00000480923 ARIH2O95376 493 aa23.24■■□□□ 1.31
VPS36-204ENST00000480923 SMARCC2Q8TAQ2 1214 aa23.24■■□□□ 1.31
VPS36-204ENST00000480923 PDLIM7Q9NR12 457 aa23.24■■□□□ 1.31
VPS36-204ENST00000480923 BAZ2BQ9UIF8 2168 aaKnown RBP23.24■■□□□ 1.31
VPS36-204ENST00000480923 DCDC2CA8MYV0 355 aa23.23■■□□□ 1.31
VPS36-204ENST00000480923 CLTBP09497 229 aa23.23■■□□□ 1.31
VPS36-204ENST00000480923 CPT1AP50416 773 aa23.23■■□□□ 1.31
VPS36-204ENST00000480923 METAP2P50579 478 aaKnown RBP eCLIP23.23■■□□□ 1.31
VPS36-204ENST00000480923 PGM5Q15124 567 aa23.23■■□□□ 1.31
VPS36-204ENST00000480923 BRDTQ58F21 947 aaPredicted RBP23.23■■□□□ 1.31
VPS36-204ENST00000480923 HEATR3Q7Z4Q2 680 aa23.23■■□□□ 1.31
VPS36-204ENST00000480923 CNTNAP5Q8WYK1 1306 aa23.23■■□□□ 1.31
VPS36-204ENST00000480923 ARVCFO00192 962 aa23.22■■□□□ 1.31
VPS36-204ENST00000480923 BMP8BP34820 402 aa23.22■■□□□ 1.31
VPS36-204ENST00000480923 RCAN1P53805 252 aa23.22■■□□□ 1.31
VPS36-204ENST00000480923 LY6KQ17RY6 165 aa23.22■■□□□ 1.31
VPS36-204ENST00000480923 CCDC62Q6P9F0 684 aa23.22■■□□□ 1.31
VPS36-204ENST00000480923 ANKRD33Q7Z3H0 272 aa23.22■■□□□ 1.31
VPS36-204ENST00000480923 SH3RF1Q7Z6J0 888 aa23.22■■□□□ 1.31
VPS36-204ENST00000480923 IL31RAQ8NI17 732 aa23.22■■□□□ 1.31
VPS36-204ENST00000480923 TOX2Q96NM4 488 aa23.22■■□□□ 1.31
VPS36-204ENST00000480923 UBE2OQ9C0C9 1292 aaKnown RBP23.22■■□□□ 1.31
VPS36-204ENST00000480923 POLR3EQ9NVU0 708 aa23.22■■□□□ 1.31
VPS36-204ENST00000480923 MRVI1Q9Y6F6 885 aa23.22■■□□□ 1.31
VPS36-204ENST00000480923 MROH7Q68CQ1 1323 aa23.22■■□□□ 1.31
VPS36-204ENST00000480923 TRIM43BA6NCK2 446 aa23.21■■□□□ 1.31
VPS36-204ENST00000480923 MYL3P08590 195 aa23.21■■□□□ 1.31
VPS36-204ENST00000480923 CDC27P30260 824 aa23.21■■□□□ 1.31
VPS36-204ENST00000480923 CCND2P30279 289 aa23.21■■□□□ 1.31
VPS36-204ENST00000480923 USP17L6PQ6QN14 398 aa23.21■■□□□ 1.31
VPS36-204ENST00000480923 VSIG10LQ86VR7 867 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms