RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 MRPL47Q9HD33 250 aaKnown RBP10.36□□□□□ -0.75
VEGFA-212ENST00000480614 SPATS2LQ9NUQ6 558 aaKnown RBP10.36□□□□□ -0.75
VEGFA-212ENST00000480614 CITO14578 2027 aa10.36□□□□□ -0.75
VEGFA-212ENST00000480614 PHLPP2Q6ZVD8 1323 aa10.36□□□□□ -0.75
VEGFA-212ENST00000480614 SESN3P58005 492 aa10.36□□□□□ -0.75
VEGFA-212ENST00000480614 ARMCX5Q6P1M9 558 aa10.36□□□□□ -0.75
VEGFA-212ENST00000480614 DHX38Q92620 1227 aaKnown RBP10.36□□□□□ -0.75
VEGFA-212ENST00000480614 NDUFAF2Q8N183 169 aa10.36□□□□□ -0.75
VEGFA-212ENST00000480614 MRFAP1L1Q96HT8 127 aa10.36□□□□□ -0.75
VEGFA-212ENST00000480614 ATP8B1O43520 1251 aa10.36□□□□□ -0.75
VEGFA-212ENST00000480614 PRDM1O75626 825 aa10.36□□□□□ -0.75
VEGFA-212ENST00000480614 CPA1P15085 419 aa10.36□□□□□ -0.75
VEGFA-212ENST00000480614 PMLP29590 882 aa10.36□□□□□ -0.75
VEGFA-212ENST00000480614 RPS8P62241 208 aaKnown RBP10.36□□□□□ -0.75
VEGFA-212ENST00000480614 EXOC3L4Q17RC7 722 aa10.36□□□□□ -0.75
VEGFA-212ENST00000480614 BZW1Q7L1Q6 419 aaKnown RBP10.36□□□□□ -0.75
VEGFA-212ENST00000480614 NT5C1BQ96P26 610 aa10.36□□□□□ -0.75
VEGFA-212ENST00000480614 ZNF212Q9UDV6 495 aa10.36□□□□□ -0.75
VEGFA-212ENST00000480614 MAD1L1Q9Y6D9 718 aa10.35□□□□□ -0.75
VEGFA-212ENST00000480614 DLATP10515 647 aaKnown RBP10.35□□□□□ -0.75
VEGFA-212ENST00000480614 ANKRD35Q8N283 1001 aa10.35□□□□□ -0.75
VEGFA-212ENST00000480614 ZBTB7BO15156 539 aaPredicted RBP10.35□□□□□ -0.75
VEGFA-212ENST00000480614 ZNF189O75820 626 aaPredicted RBP10.35□□□□□ -0.75
VEGFA-212ENST00000480614 KCNJ14Q9UNX9 436 aa10.35□□□□□ -0.75
VEGFA-212ENST00000480614 ART3Q13508 389 aa10.35□□□□□ -0.75
VEGFA-212ENST00000480614 FBXO11Q86XK2 927 aa10.35□□□□□ -0.75
VEGFA-212ENST00000480614 FANCBQ8NB91 859 aa10.35□□□□□ -0.75
VEGFA-212ENST00000480614 PHACTR3Q96KR7 559 aa10.35□□□□□ -0.75
VEGFA-212ENST00000480614 CPSF3Q9UKF6 684 aaKnown RBP10.35□□□□□ -0.75
VEGFA-212ENST00000480614 CHEK2O96017 543 aa10.35□□□□□ -0.75
VEGFA-212ENST00000480614 ABI1Q8IZP0 508 aa10.35□□□□□ -0.75
VEGFA-212ENST00000480614 DISC1Q9NRI5 854 aa10.35□□□□□ -0.75
VEGFA-212ENST00000480614 ATP10BO94823 1461 aa10.35□□□□□ -0.75
VEGFA-212ENST00000480614 LRRIQ4A6NIV6 560 aa10.35□□□□□ -0.75
VEGFA-212ENST00000480614 RLBP1P12271 317 aa10.35□□□□□ -0.75
VEGFA-212ENST00000480614 MYO1EQ12965 1108 aa10.35□□□□□ -0.75
VEGFA-212ENST00000480614 PNOCQ13519 176 aa10.35□□□□□ -0.75
VEGFA-212ENST00000480614 ARHGEF18Q6ZSZ5 1173 aa10.35□□□□□ -0.75
VEGFA-212ENST00000480614 TMC4Q7Z404 712 aa10.35□□□□□ -0.75
VEGFA-212ENST00000480614 ABL1P00519 1130 aa10.35□□□□□ -0.75
VEGFA-212ENST00000480614 BLZF1Q9H2G9 400 aa10.35□□□□□ -0.75
VEGFA-212ENST00000480614 SLC38A10Q9HBR0 1119 aa10.35□□□□□ -0.75
VEGFA-212ENST00000480614 MLH3Q9UHC1 1453 aa10.35□□□□□ -0.75
VEGFA-212ENST00000480614 HNRNPDLO14979 420 aaKnown RBP10.35□□□□□ -0.75
VEGFA-212ENST00000480614 CLTAP09496 248 aa10.35□□□□□ -0.75
VEGFA-212ENST00000480614 CERKLQ49MI3 558 aaPredicted RBP10.35□□□□□ -0.75
VEGFA-212ENST00000480614 TSPYL6Q8N831 410 aa10.35□□□□□ -0.75
VEGFA-212ENST00000480614 ADD3Q9UEY8 706 aaKnown RBP10.35□□□□□ -0.75
VEGFA-212ENST00000480614 LRMPQ12912 555 aa10.35□□□□□ -0.75
VEGFA-212ENST00000480614 PNMA1Q8ND90 353 aa10.35□□□□□ -0.75
VEGFA-212ENST00000480614 CXorf38Q8TB03 319 aa10.35□□□□□ -0.75
VEGFA-212ENST00000480614 PBKQ96KB5 322 aa10.35□□□□□ -0.75
VEGFA-212ENST00000480614 FAM227BQ96M60 508 aa10.35□□□□□ -0.75
VEGFA-212ENST00000480614 TACO1Q9BSH4 297 aaKnown RBP10.35□□□□□ -0.75
VEGFA-212ENST00000480614 TCP10Q12799 353 aa10.34□□□□□ -0.75
VEGFA-212ENST00000480614 CNPY4Q8N129 248 aa10.34□□□□□ -0.75
VEGFA-212ENST00000480614 PPWD1Q96BP3 646 aaKnown RBP10.34□□□□□ -0.75
VEGFA-212ENST00000480614 NEURL1BA8MQ27 555 aa10.34□□□□□ -0.75
VEGFA-212ENST00000480614 IPO5O00410 1097 aaKnown RBP10.34□□□□□ -0.75
VEGFA-212ENST00000480614 IFNA8P32881 189 aa10.34□□□□□ -0.75
VEGFA-212ENST00000480614 ADAM9Q13443 819 aa10.34□□□□□ -0.75
VEGFA-212ENST00000480614 ATP6V1E2Q96A05 226 aa10.34□□□□□ -0.75
VEGFA-212ENST00000480614 MYH7P12883 1935 aa10.34□□□□□ -0.75
VEGFA-212ENST00000480614 SGK1O00141 431 aa10.34□□□□□ -0.75
VEGFA-212ENST00000480614 RFX6Q8HWS3 928 aa10.34□□□□□ -0.75
VEGFA-212ENST00000480614 MRPL46Q9H2W6 279 aaKnown RBP10.34□□□□□ -0.75
VEGFA-212ENST00000480614 PPP2R2CQ9Y2T4 447 aa10.34□□□□□ -0.75
VEGFA-212ENST00000480614 PFKFB2O60825 505 aa10.34□□□□□ -0.75
VEGFA-212ENST00000480614 ALAS1P13196 640 aa10.34□□□□□ -0.75
VEGFA-212ENST00000480614 FNBP4Q8N3X1 1017 aaPredicted RBP10.34□□□□□ -0.75
VEGFA-212ENST00000480614 PARD3BQ8TEW8 1205 aa10.34□□□□□ -0.75
VEGFA-212ENST00000480614 CNKSR1Q969H4 720 aa10.34□□□□□ -0.75
VEGFA-212ENST00000480614 WDR11Q9BZH6 1224 aa10.34□□□□□ -0.75
VEGFA-212ENST00000480614 PACSIN2Q9UNF0 486 aaPredicted RBP10.34□□□□□ -0.75
VEGFA-212ENST00000480614 CROCC2H7BZ55 1655 aa10.34□□□□□ -0.75
VEGFA-212ENST00000480614 GNGT2O14610 69 aa10.34□□□□□ -0.75
VEGFA-212ENST00000480614 PPM1KQ8N3J5 372 aa10.34□□□□□ -0.75
VEGFA-212ENST00000480614 SERPINI1Q99574 410 aa10.34□□□□□ -0.75
VEGFA-212ENST00000480614 ADCY9O60503 1353 aa10.34□□□□□ -0.75
VEGFA-212ENST00000480614 HNRNPCL2B2RXH8 293 aa10.34□□□□□ -0.75
VEGFA-212ENST00000480614 HNRNPCL1O60812 293 aaKnown RBP10.34□□□□□ -0.75
VEGFA-212ENST00000480614 TECP42680 631 aa10.34□□□□□ -0.75
VEGFA-212ENST00000480614 CENPKQ9BS16 269 aa10.34□□□□□ -0.75
VEGFA-212ENST00000480614 UPF3AQ9H1J1 476 aaKnown RBP10.34□□□□□ -0.75
VEGFA-212ENST00000480614 PCDHA1Q9Y5I3 950 aa10.34□□□□□ -0.75
VEGFA-212ENST00000480614 CROCCQ5TZA2 2017 aa10.34□□□□□ -0.75
VEGFA-212ENST00000480614 APOEP02649 317 aa10.34□□□□□ -0.75
VEGFA-212ENST00000480614 ARL13BQ3SXY8 428 aa10.34□□□□□ -0.75
VEGFA-212ENST00000480614 SLC7A3Q8WY07 619 aa10.34□□□□□ -0.75
VEGFA-212ENST00000480614 KIF9Q9HAQ2 790 aa10.34□□□□□ -0.75
VEGFA-212ENST00000480614 NUP153P49790 1475 aaKnown RBP10.34□□□□□ -0.75
VEGFA-212ENST00000480614 ABCC2Q92887 1545 aa10.34□□□□□ -0.75
VEGFA-212ENST00000480614 PGRMC1O00264 195 aaKnown RBP10.34□□□□□ -0.75
VEGFA-212ENST00000480614 ICA1Q05084 483 aa10.34□□□□□ -0.75
VEGFA-212ENST00000480614 NR1H3Q13133 447 aa10.34□□□□□ -0.75
VEGFA-212ENST00000480614 CDC37Q16543 378 aaPredicted RBP10.34□□□□□ -0.75
VEGFA-212ENST00000480614 FAM47CQ5HY64 1035 aa10.34□□□□□ -0.75
VEGFA-212ENST00000480614 FAM26FQ5R3K3 315 aa10.34□□□□□ -0.75
VEGFA-212ENST00000480614 CCDC138Q96M89 665 aa10.34□□□□□ -0.75
VEGFA-212ENST00000480614 MAP3K7O43318 606 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms