RNA–Protein interactions for RNA: ENST00000480237.1

LINC00173-203, long intergenic non-protein coding RNA 173, humanhuman

TSL 2 BASIC

Gene LINC00173, Length 1,597 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-203ENST00000480237 MRVI1Q9Y6F6 885 aa11.87□□□□□ -0.51
LINC00173-203ENST00000480237 MORC2Q9Y6X9 1032 aaPredicted RBP11.87□□□□□ -0.51
LINC00173-203ENST00000480237 ABCB11O95342 1321 aa11.86□□□□□ -0.51
LINC00173-203ENST00000480237 KAT6AQ92794 2004 aa11.86□□□□□ -0.51
LINC00173-203ENST00000480237 CCNT1O60563 726 aaKnown RBP11.86□□□□□ -0.51
LINC00173-203ENST00000480237 PFKFB1P16118 471 aa11.86□□□□□ -0.51
LINC00173-203ENST00000480237 PTPREP23469 700 aa11.86□□□□□ -0.51
LINC00173-203ENST00000480237 CLK2P49760 499 aaKnown RBP11.86□□□□□ -0.51
LINC00173-203ENST00000480237 NDUFA8P51970 172 aa11.86□□□□□ -0.51
LINC00173-203ENST00000480237 MAP3K11Q16584 847 aa11.86□□□□□ -0.51
LINC00173-203ENST00000480237 C6orf132Q5T0Z8 1188 aa11.86□□□□□ -0.51
LINC00173-203ENST00000480237 RESP18Q5W5W9 173 aa11.86□□□□□ -0.51
LINC00173-203ENST00000480237 POTEEQ6S8J3 1075 aa11.86□□□□□ -0.51
LINC00173-203ENST00000480237 ARMC9Q7Z3E5 817 aa11.86□□□□□ -0.51
LINC00173-203ENST00000480237 ANKRD13AQ8IZ07 590 aa11.86□□□□□ -0.51
LINC00173-203ENST00000480237 ELP3Q9H9T3 547 aa11.86□□□□□ -0.51
LINC00173-203ENST00000480237 FAM13BQ9NYF5 915 aa11.86□□□□□ -0.51
LINC00173-203ENST00000480237 CCPG1Q9ULG6 757 aa11.86□□□□□ -0.51
LINC00173-203ENST00000480237 PPP1R9AQ9ULJ8 1098 aa11.86□□□□□ -0.51
LINC00173-203ENST00000480237 AFG3L2Q9Y4W6 797 aa11.86□□□□□ -0.51
LINC00173-203ENST00000480237 SRPRBQ9Y5M8 271 aaKnown RBP11.86□□□□□ -0.51
LINC00173-203ENST00000480237 VWA3AA6NCI4 1184 aa11.85□□□□□ -0.51
LINC00173-203ENST00000480237 GOLGA6L3A6NEY3 463 aa11.85□□□□□ -0.51
LINC00173-203ENST00000480237 SPDYE3A6NKU9 549 aa11.85□□□□□ -0.51
LINC00173-203ENST00000480237 USP17L15C9J2P7 530 aa11.85□□□□□ -0.51
LINC00173-203ENST00000480237 USP17L13C9JLJ4 530 aa11.85□□□□□ -0.51
LINC00173-203ENST00000480237 USP17L11C9JVI0 530 aa11.85□□□□□ -0.51
LINC00173-203ENST00000480237 USP17L18D6R9N7 530 aa11.85□□□□□ -0.51
LINC00173-203ENST00000480237 USP17L22D6RA61 530 aa11.85□□□□□ -0.51
LINC00173-203ENST00000480237 USP17L17D6RBQ6 530 aa11.85□□□□□ -0.51
LINC00173-203ENST00000480237 USP17L19D6RCP7 530 aa11.85□□□□□ -0.51
LINC00173-203ENST00000480237 USP17L20D6RJB6 530 aa11.85□□□□□ -0.51
LINC00173-203ENST00000480237 NEMFO60524 1076 aa11.85□□□□□ -0.51
LINC00173-203ENST00000480237 PSEN2P49810 448 aa11.85□□□□□ -0.51
LINC00173-203ENST00000480237 USP17L24Q0WX57 530 aa11.85□□□□□ -0.51
LINC00173-203ENST00000480237 AP3B2Q13367 1082 aa11.85□□□□□ -0.51
LINC00173-203ENST00000480237 ORC2Q13416 577 aaPredicted RBP11.85□□□□□ -0.51
LINC00173-203ENST00000480237 CAMK4Q16566 473 aa11.85□□□□□ -0.51
LINC00173-203ENST00000480237 MCTP2Q6DN12 878 aa11.85□□□□□ -0.51
LINC00173-203ENST00000480237 USP17L6PQ6QN14 398 aa11.85□□□□□ -0.51
LINC00173-203ENST00000480237 SHC4Q6S5L8 630 aa11.85□□□□□ -0.51
LINC00173-203ENST00000480237 LRSAM1Q6UWE0 723 aa11.85□□□□□ -0.51
LINC00173-203ENST00000480237 RBM46Q8TBY0 533 aaKnown RBP11.85□□□□□ -0.51
LINC00173-203ENST00000480237 ANO3Q9BYT9 981 aa11.85□□□□□ -0.51
LINC00173-203ENST00000480237 MRPL11Q9Y3B7 192 aaKnown RBP11.85□□□□□ -0.51
LINC00173-203ENST00000480237 ICAM1P05362 532 aa11.84□□□□□ -0.51
LINC00173-203ENST00000480237 SYKP43405 635 aa11.84□□□□□ -0.51
LINC00173-203ENST00000480237 GRIN1Q05586 938 aa11.84□□□□□ -0.51
LINC00173-203ENST00000480237 SNW1Q13573 536 aaKnown RBP11.84□□□□□ -0.51
LINC00173-203ENST00000480237 MAP1SQ66K74 1059 aaPredicted RBP11.84□□□□□ -0.51
LINC00173-203ENST00000480237 ARL6IP4Q66PJ3 421 aaKnown RBP11.84□□□□□ -0.51
LINC00173-203ENST00000480237 MOB2Q70IA6 237 aa11.84□□□□□ -0.51
LINC00173-203ENST00000480237 LDHDQ86WU2 507 aa11.84□□□□□ -0.51
LINC00173-203ENST00000480237 FMR1NBQ8N0W7 255 aaPredicted RBP11.84□□□□□ -0.51
LINC00173-203ENST00000480237 ENGASEQ8NFI3 743 aa11.84□□□□□ -0.51
LINC00173-203ENST00000480237 CLMNQ96JQ2 1002 aa11.84□□□□□ -0.51
LINC00173-203ENST00000480237 CSRNP2Q9H175 543 aa11.84□□□□□ -0.51
LINC00173-203ENST00000480237 ZNF408Q9H9D4 720 aa11.84□□□□□ -0.51
LINC00173-203ENST00000480237 RRAGCQ9HB90 399 aa11.84□□□□□ -0.51
LINC00173-203ENST00000480237 LAD1O00515 517 aa11.84□□□□□ -0.51
LINC00173-203ENST00000480237 ARHGAP33O14559 1287 aa11.84□□□□□ -0.51
LINC00173-203ENST00000480237 CTAGE5O15320 804 aa11.84□□□□□ -0.51
LINC00173-203ENST00000480237 ZBED4O75132 1171 aa11.84□□□□□ -0.51
LINC00173-203ENST00000480237 OR52Z1P0C646 297 aa11.84□□□□□ -0.51
LINC00173-203ENST00000480237 FDX1P10109 184 aa11.84□□□□□ -0.51
LINC00173-203ENST00000480237 SPECC1Q5M775 1068 aa11.84□□□□□ -0.51
LINC00173-203ENST00000480237 GADL1Q6ZQY3 521 aa11.84□□□□□ -0.51
LINC00173-203ENST00000480237 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.84□□□□□ -0.51
LINC00173-203ENST00000480237 ERO1BQ86YB8 467 aa11.84□□□□□ -0.51
LINC00173-203ENST00000480237 CPXCR1Q8N123 301 aa11.84□□□□□ -0.51
LINC00173-203ENST00000480237 NAP1L4Q99733 375 aaKnown RBP11.84□□□□□ -0.51
LINC00173-203ENST00000480237 TSPY26PQ9H489 355 aa11.84□□□□□ -0.51
LINC00173-203ENST00000480237 SLC38A10Q9HBR0 1119 aa11.84□□□□□ -0.51
LINC00173-203ENST00000480237 SPDYE5A6NIY4 337 aa11.83□□□□□ -0.52
LINC00173-203ENST00000480237 MEIS2O14770 477 aa11.83□□□□□ -0.52
LINC00173-203ENST00000480237 ZNF202O95125 648 aa11.83□□□□□ -0.52
LINC00173-203ENST00000480237 TDP2O95551 362 aa11.83□□□□□ -0.52
LINC00173-203ENST00000480237 CFBP00751 764 aa11.83□□□□□ -0.52
LINC00173-203ENST00000480237 FOSP01100 380 aaPredicted RBP11.83□□□□□ -0.52
LINC00173-203ENST00000480237 GCFC2P16383 781 aaKnown RBP11.83□□□□□ -0.52
LINC00173-203ENST00000480237 HOXA13P31271 388 aaPredicted RBP11.83□□□□□ -0.52
LINC00173-203ENST00000480237 TXLNAP40222 546 aa11.83□□□□□ -0.52
LINC00173-203ENST00000480237 PPATQ06203 517 aa11.83□□□□□ -0.52
LINC00173-203ENST00000480237 SH3D19Q5HYK7 790 aa11.83□□□□□ -0.52
LINC00173-203ENST00000480237 TEX2Q8IWB9 1127 aa11.83□□□□□ -0.52
LINC00173-203ENST00000480237 CKAP2LQ8IYA6 745 aa11.83□□□□□ -0.52
LINC00173-203ENST00000480237 ZNF526Q8TF50 670 aaPredicted RBP11.83□□□□□ -0.52
LINC00173-203ENST00000480237 ATG4CQ96DT6 458 aa11.83□□□□□ -0.52
LINC00173-203ENST00000480237 AGBL1Q96MI9 1066 aa11.83□□□□□ -0.52
LINC00173-203ENST00000480237 TMEM60Q9H2L4 133 aa11.83□□□□□ -0.52
LINC00173-203ENST00000480237 EHMT1Q9H9B1 1298 aa11.83□□□□□ -0.52
LINC00173-203ENST00000480237 CDHR5Q9HBB8 845 aa11.83□□□□□ -0.52
LINC00173-203ENST00000480237 PNMA2Q9UL42 364 aa11.83□□□□□ -0.52
LINC00173-203ENST00000480237 KCNH3Q9ULD8 1083 aa11.83□□□□□ -0.52
LINC00173-203ENST00000480237 HPSEQ9Y251 543 aa11.83□□□□□ -0.52
LINC00173-203ENST00000480237 FAM237AA0A1B0GTK4 181 aa11.82□□□□□ -0.52
LINC00173-203ENST00000480237 GCOM1H8Y6P7 765 aaPredicted RBP11.82□□□□□ -0.52
LINC00173-203ENST00000480237 PIK3CDO00329 1044 aa11.82□□□□□ -0.52
LINC00173-203ENST00000480237 TRAF5O00463 557 aa11.82□□□□□ -0.52
LINC00173-203ENST00000480237 OPLAHO14841 1288 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms