RNA–Protein interactions for RNA: ENST00000479958.6

COMMD3-212, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,443 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-212ENST00000479958 GLI4P10075 376 aa8.2□□□□□ -1.1
COMMD3-212ENST00000479958 ZC3H6P61129 1189 aaKnown RBP8.2□□□□□ -1.1
COMMD3-212ENST00000479958 ZNF200P98182 395 aaPredicted RBP8.2□□□□□ -1.1
COMMD3-212ENST00000479958 SLC9A5Q14940 896 aa8.2□□□□□ -1.1
COMMD3-212ENST00000479958 GJB6O95452 261 aa8.2□□□□□ -1.1
COMMD3-212ENST00000479958 SNRPB2P08579 225 aaKnown RBP8.2□□□□□ -1.1
COMMD3-212ENST00000479958 NCKAP1LP55160 1127 aa8.2□□□□□ -1.1
COMMD3-212ENST00000479958 E4F1Q66K89 784 aaPredicted RBP8.2□□□□□ -1.1
COMMD3-212ENST00000479958 ZNF227Q86WZ6 799 aa8.2□□□□□ -1.1
COMMD3-212ENST00000479958 IGDCC3Q8IVU1 814 aa8.2□□□□□ -1.1
COMMD3-212ENST00000479958 MICAL1Q8TDZ2 1067 aa8.2□□□□□ -1.1
COMMD3-212ENST00000479958 BTN2A2Q8WVV5 523 aa8.2□□□□□ -1.1
COMMD3-212ENST00000479958 MTA3Q9BTC8 594 aa8.2□□□□□ -1.1
COMMD3-212ENST00000479958 WRNQ14191 1432 aaPredicted RBP eCLIP8.19□□□□□ -1.1
COMMD3-212ENST00000479958 CADPSQ9ULU8 1353 aa8.19□□□□□ -1.1
COMMD3-212ENST00000479958 PPP1R11O60927 126 aaPredicted RBP8.19□□□□□ -1.1
COMMD3-212ENST00000479958 FUCA1P04066 466 aa8.19□□□□□ -1.1
COMMD3-212ENST00000479958 NCAM1P13591 858 aa8.19□□□□□ -1.1
COMMD3-212ENST00000479958 ECI1P42126 302 aa8.19□□□□□ -1.1
COMMD3-212ENST00000479958 KCNJ6P48051 423 aa8.19□□□□□ -1.1
COMMD3-212ENST00000479958 AFF3P51826 1226 aaKnown RBP8.19□□□□□ -1.1
COMMD3-212ENST00000479958 KRTAP4-7Q9BYR0 210 aa8.19□□□□□ -1.1
COMMD3-212ENST00000479958 ST7Q9NRC1 585 aa8.19□□□□□ -1.1
COMMD3-212ENST00000479958 FAN1Q9Y2M0 1017 aa8.19□□□□□ -1.1
COMMD3-212ENST00000479958 NESP48681 1621 aa8.19□□□□□ -1.1
COMMD3-212ENST00000479958 SYNJ1O43426 1573 aa8.18□□□□□ -1.1
COMMD3-212ENST00000479958 MYO1BO43795 1136 aa8.18□□□□□ -1.1
COMMD3-212ENST00000479958 GTF2A2P52657 109 aa8.18□□□□□ -1.1
COMMD3-212ENST00000479958 FAM129CQ86XR2 697 aa8.18□□□□□ -1.1
COMMD3-212ENST00000479958 PANK1Q8TE04 598 aa8.18□□□□□ -1.1
COMMD3-212ENST00000479958 FRS2Q8WU20 508 aa8.18□□□□□ -1.1
COMMD3-212ENST00000479958 HNRNPLLQ8WVV9 542 aaKnown RBP8.18□□□□□ -1.1
COMMD3-212ENST00000479958 ALG3Q92685 438 aa8.18□□□□□ -1.1
COMMD3-212ENST00000479958 DIO2Q92813 273 aa8.18□□□□□ -1.1
COMMD3-212ENST00000479958 DACT3Q96B18 629 aaPredicted RBP8.18□□□□□ -1.1
COMMD3-212ENST00000479958 LGR4Q9BXB1 951 aa8.18□□□□□ -1.1
COMMD3-212ENST00000479958 RNF38Q9H0F5 515 aa8.18□□□□□ -1.1
COMMD3-212ENST00000479958 PPP1R1BQ9UD71 204 aaPredicted RBP8.18□□□□□ -1.1
COMMD3-212ENST00000479958 TIMM13Q9Y5L4 95 aaPredicted RBP8.18□□□□□ -1.1
COMMD3-212ENST00000479958 MEFVO15553 781 aaPredicted RBP8.17□□□□□ -1.1
COMMD3-212ENST00000479958 STK10O94804 968 aaKnown RBP8.17□□□□□ -1.1
COMMD3-212ENST00000479958 SCG5P05408 212 aa8.17□□□□□ -1.1
COMMD3-212ENST00000479958 RPL11P62913 178 aaKnown RBP8.17□□□□□ -1.1
COMMD3-212ENST00000479958 WWC2Q6AWC2 1192 aa8.17□□□□□ -1.1
COMMD3-212ENST00000479958 TMEFF1Q8IYR6 380 aa8.17□□□□□ -1.1
COMMD3-212ENST00000479958 TSPAN17Q96FV3 270 aa8.17□□□□□ -1.1
COMMD3-212ENST00000479958 PWWP2AQ96N64 755 aa8.17□□□□□ -1.1
COMMD3-212ENST00000479958 MARCH2Q9P0N8 246 aa8.17□□□□□ -1.1
COMMD3-212ENST00000479958 RUSC2Q8N2Y8 1516 aa8.16□□□□□ -1.1
COMMD3-212ENST00000479958 IQCA1LA6NCM1 817 aa8.16□□□□□ -1.1
COMMD3-212ENST00000479958 KCNAB2Q13303 367 aa8.16□□□□□ -1.1
COMMD3-212ENST00000479958 DDR2Q16832 855 aa8.16□□□□□ -1.1
COMMD3-212ENST00000479958 NAALADL2Q58DX5 795 aa8.16□□□□□ -1.1
COMMD3-212ENST00000479958 MRM1Q6IN84 353 aaKnown RBP8.16□□□□□ -1.1
COMMD3-212ENST00000479958 NPLOC4Q8TAT6 608 aa8.16□□□□□ -1.1
COMMD3-212ENST00000479958 TRIM55Q9BYV6 548 aa8.16□□□□□ -1.1
COMMD3-212ENST00000479958 BTG4Q9NY30 223 aa8.16□□□□□ -1.1
COMMD3-212ENST00000479958 HCFC2Q9Y5Z7 792 aa8.16□□□□□ -1.1
COMMD3-212ENST00000479958 SOGA1O94964 1423 aa8.16□□□□□ -1.1
COMMD3-212ENST00000479958 U2SURPO15042 1029 aaKnown RBP8.15□□□□□ -1.1
COMMD3-212ENST00000479958 KLF4O43474 513 aa8.15□□□□□ -1.1
COMMD3-212ENST00000479958 NTRK1P04629 796 aa8.15□□□□□ -1.1
COMMD3-212ENST00000479958 BMP7P18075 431 aa8.15□□□□□ -1.1
COMMD3-212ENST00000479958 DCP2Q8IU60 420 aaKnown RBP8.15□□□□□ -1.1
COMMD3-212ENST00000479958 CKAP2LQ8IYA6 745 aa8.15□□□□□ -1.1
COMMD3-212ENST00000479958 AP5M1Q9H0R1 490 aa8.15□□□□□ -1.1
COMMD3-212ENST00000479958 C22orf46C9J442 243 aa8.14□□□□□ -1.11
COMMD3-212ENST00000479958 FOXO4P98177 505 aa8.14□□□□□ -1.11
COMMD3-212ENST00000479958 HSP90AA2PQ14568 343 aaPredicted RBP8.14□□□□□ -1.11
COMMD3-212ENST00000479958 INF2Q27J81 1249 aa8.14□□□□□ -1.11
COMMD3-212ENST00000479958 SLC10A6Q3KNW5 377 aa8.14□□□□□ -1.11
COMMD3-212ENST00000479958 ACBD5Q5T8D3 534 aaPredicted RBP8.14□□□□□ -1.11
COMMD3-212ENST00000479958 PLEKHO2Q8TD55 490 aa8.14□□□□□ -1.11
COMMD3-212ENST00000479958 DPF3Q92784 378 aa8.14□□□□□ -1.11
COMMD3-212ENST00000479958 SGSM3Q96HU1 749 aa8.14□□□□□ -1.11
COMMD3-212ENST00000479958 ZCCHC4Q9H5U6 513 aa8.14□□□□□ -1.11
COMMD3-212ENST00000479958 RXFP1Q9HBX9 757 aa8.14□□□□□ -1.11
COMMD3-212ENST00000479958 EPB41L4AQ9HCS5 686 aaPredicted RBP8.14□□□□□ -1.11
COMMD3-212ENST00000479958 TBX1O43435 398 aa8.13□□□□□ -1.11
COMMD3-212ENST00000479958 SASH1O94885 1247 aa8.13□□□□□ -1.11
COMMD3-212ENST00000479958 ATP2B1P20020 1258 aa8.13□□□□□ -1.11
COMMD3-212ENST00000479958 IGFBP6P24592 240 aaPredicted RBP8.13□□□□□ -1.11
COMMD3-212ENST00000479958 LTBRP36941 435 aa8.13□□□□□ -1.11
COMMD3-212ENST00000479958 MROH9Q5TGP6 573 aa8.13□□□□□ -1.11
COMMD3-212ENST00000479958 CEP68Q76N32 757 aa8.13□□□□□ -1.11
COMMD3-212ENST00000479958 CELF2-AS1Q8N7Q2 184 aa8.13□□□□□ -1.11
COMMD3-212ENST00000479958 KCTD13Q8WZ19 329 aa8.13□□□□□ -1.11
COMMD3-212ENST00000479958 TRMT2BQ96GJ1 504 aaKnown RBP8.13□□□□□ -1.11
COMMD3-212ENST00000479958 CUX1P39880 1505 aa8.13□□□□□ -1.11
COMMD3-212ENST00000479958 ASGR2P07307 311 aa8.12□□□□□ -1.11
COMMD3-212ENST00000479958 GFRA1P56159 465 aa8.12□□□□□ -1.11
COMMD3-212ENST00000479958 PPP2R2AP63151 447 aa8.12□□□□□ -1.11
COMMD3-212ENST00000479958 CAP1Q01518 475 aa8.12□□□□□ -1.11
COMMD3-212ENST00000479958 RAB33AQ14088 237 aa8.12□□□□□ -1.11
COMMD3-212ENST00000479958 MBLAC2Q68D91 279 aa8.12□□□□□ -1.11
COMMD3-212ENST00000479958 TEX2Q8IWB9 1127 aa8.12□□□□□ -1.11
COMMD3-212ENST00000479958 PPIL6Q8IXY8 311 aa8.12□□□□□ -1.11
COMMD3-212ENST00000479958 KREMEN2Q8NCW0 462 aa8.12□□□□□ -1.11
COMMD3-212ENST00000479958 TMEM169Q96HH4 297 aa8.12□□□□□ -1.11
COMMD3-212ENST00000479958 CHAMP1Q96JM3 812 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms