RNA–Protein interactions for RNA: ENST00000479660.1

CLDN18-203, Transcript of claudin 18, humanhuman

TSL 2

Gene CLDN18, Length 2,039 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-203ENST00000479660 CPXCR1Q8N123 301 aa16.26■□□□□ 0.19
CLDN18-203ENST00000479660 MBOAT7Q96N66 472 aa16.26■□□□□ 0.19
CLDN18-203ENST00000479660 GSDMAQ96QA5 445 aa16.26■□□□□ 0.19
CLDN18-203ENST00000479660 SLC38A10Q9HBR0 1119 aa16.26■□□□□ 0.19
CLDN18-203ENST00000479660 SMTNL1A8MU46 457 aa16.26■□□□□ 0.19
CLDN18-203ENST00000479660 GTPBP6O43824 516 aaPredicted RBP16.26■□□□□ 0.19
CLDN18-203ENST00000479660 PPP1R12BO60237 982 aaPredicted RBP16.26■□□□□ 0.19
CLDN18-203ENST00000479660 MLKLQ8NB16 471 aa16.26■□□□□ 0.19
CLDN18-203ENST00000479660 CALML4Q96GE6 196 aa16.26■□□□□ 0.19
CLDN18-203ENST00000479660 MMTAG2Q9BU76 263 aaKnown RBP16.26■□□□□ 0.19
CLDN18-203ENST00000479660 TRIM5Q9C035 493 aa16.26■□□□□ 0.19
CLDN18-203ENST00000479660 BLZF1Q9H2G9 400 aa16.26■□□□□ 0.19
CLDN18-203ENST00000479660 PCDHA12Q9UN75 941 aa16.26■□□□□ 0.19
CLDN18-203ENST00000479660 POTEMA6NI47 508 aa16.25■□□□□ 0.19
CLDN18-203ENST00000479660 PLCG1P19174 1290 aa16.25■□□□□ 0.19
CLDN18-203ENST00000479660 EPHX2P34913 555 aa16.25■□□□□ 0.19
CLDN18-203ENST00000479660 MAP3K9P80192 1104 aa16.25■□□□□ 0.19
CLDN18-203ENST00000479660 CUL4BQ13620 913 aa16.25■□□□□ 0.19
CLDN18-203ENST00000479660 PRR16Q569H4 304 aa16.25■□□□□ 0.19
CLDN18-203ENST00000479660 GJA10Q969M2 543 aa16.25■□□□□ 0.19
CLDN18-203ENST00000479660 C12orf42Q96LP6 360 aa16.25■□□□□ 0.19
CLDN18-203ENST00000479660 KCNMB3Q9NPA1 279 aa16.25■□□□□ 0.19
CLDN18-203ENST00000479660 CTDP1Q9Y5B0 961 aaPredicted RBP16.25■□□□□ 0.19
CLDN18-203ENST00000479660 GLTPD2A6NH11 291 aa16.24■□□□□ 0.19
CLDN18-203ENST00000479660 Q4G0T1 1027 aa16.24■□□□□ 0.19
CLDN18-203ENST00000479660 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.24■□□□□ 0.19
CLDN18-203ENST00000479660 CUEDC2Q9H467 287 aa16.24■□□□□ 0.19
CLDN18-203ENST00000479660 RAVER2Q9HCJ3 691 aaKnown RBP16.24■□□□□ 0.19
CLDN18-203ENST00000479660 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.24■□□□□ 0.19
CLDN18-203ENST00000479660 DACH1Q9UI36 760 aa16.24■□□□□ 0.19
CLDN18-203ENST00000479660 AFG3L2Q9Y4W6 797 aa16.24■□□□□ 0.19
CLDN18-203ENST00000479660 FAM86B1E9PN63 330 aa16.24■□□□□ 0.19
CLDN18-203ENST00000479660 IKBKBO14920 756 aa16.24■□□□□ 0.19
CLDN18-203ENST00000479660 GRIN3BO60391 1043 aa16.24■□□□□ 0.19
CLDN18-203ENST00000479660 ZBED4O75132 1171 aa16.24■□□□□ 0.19
CLDN18-203ENST00000479660 PTMAP06454 111 aaKnown RBP16.24■□□□□ 0.19
CLDN18-203ENST00000479660 CYP3A4P08684 503 aa16.24■□□□□ 0.19
CLDN18-203ENST00000479660 FAM86B2P0C5J1 330 aa16.24■□□□□ 0.19
CLDN18-203ENST00000479660 CIITAP33076 1130 aa16.24■□□□□ 0.19
CLDN18-203ENST00000479660 ZNF76P36508 570 aa16.24■□□□□ 0.19
CLDN18-203ENST00000479660 VGLL4Q14135 290 aa16.24■□□□□ 0.19
CLDN18-203ENST00000479660 NCAPHQ15003 741 aa16.24■□□□□ 0.19
CLDN18-203ENST00000479660 KRT79Q5XKE5 535 aa16.24■□□□□ 0.19
CLDN18-203ENST00000479660 SLFN12Q8IYM2 578 aa16.24■□□□□ 0.19
CLDN18-203ENST00000479660 ZC3H15Q8WU90 426 aaKnown RBP16.24■□□□□ 0.19
CLDN18-203ENST00000479660 UIMC1Q96RL1 719 aa16.24■□□□□ 0.19
CLDN18-203ENST00000479660 KBTBD4Q9NVX7 518 aa16.24■□□□□ 0.19
CLDN18-203ENST00000479660 FDX1P10109 184 aa16.23■□□□□ 0.19
CLDN18-203ENST00000479660 ALAS1P13196 640 aa16.23■□□□□ 0.19
CLDN18-203ENST00000479660 TPM4P67936 248 aa16.23■□□□□ 0.19
CLDN18-203ENST00000479660 SARM1Q6SZW1 724 aa16.23■□□□□ 0.19
CLDN18-203ENST00000479660 LRRC15Q8TF66 581 aa16.23■□□□□ 0.19
CLDN18-203ENST00000479660 CDK5RAP3Q96JB5 506 aa16.23■□□□□ 0.19
CLDN18-203ENST00000479660 MAGEF1Q9HAY2 307 aa16.23■□□□□ 0.19
CLDN18-203ENST00000479660 TMOD4Q9NZQ9 345 aa16.23■□□□□ 0.19
CLDN18-203ENST00000479660 SNCAIPQ9Y6H5 919 aa16.23■□□□□ 0.19
CLDN18-203ENST00000479660 ZC3H4Q9UPT8 1303 aaKnown RBP16.23■□□□□ 0.19
CLDN18-203ENST00000479660 VWA5AO00534 786 aa16.23■□□□□ 0.19
CLDN18-203ENST00000479660 MYL1P05976 194 aa16.23■□□□□ 0.19
CLDN18-203ENST00000479660 MYL5Q02045 173 aa16.23■□□□□ 0.19
CLDN18-203ENST00000479660 HS1BP3Q53T59 392 aa16.23■□□□□ 0.19
CLDN18-203ENST00000479660 SNX29Q8TEQ0 813 aa16.23■□□□□ 0.19
CLDN18-203ENST00000479660 LENG9Q96B70 501 aa16.23■□□□□ 0.19
CLDN18-203ENST00000479660 EHMT1Q9H9B1 1298 aa16.23■□□□□ 0.19
CLDN18-203ENST00000479660 CSADQ9Y600 493 aa16.23■□□□□ 0.19
CLDN18-203ENST00000479660 NFIBO00712 420 aa16.22■□□□□ 0.19
CLDN18-203ENST00000479660 TBX3O15119 743 aa16.22■□□□□ 0.19
CLDN18-203ENST00000479660 IREB2P48200 963 aaKnown RBP16.22■□□□□ 0.19
CLDN18-203ENST00000479660 ZNF75DP51815 510 aa16.22■□□□□ 0.19
CLDN18-203ENST00000479660 PLA2G4DQ86XP0 818 aa16.22■□□□□ 0.19
CLDN18-203ENST00000479660 MCF2L2Q86YR7 1114 aa16.22■□□□□ 0.19
CLDN18-203ENST00000479660 CYP2W1Q8TAV3 490 aa16.22■□□□□ 0.19
CLDN18-203ENST00000479660 ETNPPLQ8TBG4 499 aa16.22■□□□□ 0.19
CLDN18-203ENST00000479660 CLEC4DQ8WXI8 215 aa16.22■□□□□ 0.19
CLDN18-203ENST00000479660 ATG4CQ96DT6 458 aa16.22■□□□□ 0.19
CLDN18-203ENST00000479660 PNMA2Q9UL42 364 aa16.22■□□□□ 0.19
CLDN18-203ENST00000479660 PHIPQ8WWQ0 1821 aa16.22■□□□□ 0.19
CLDN18-203ENST00000479660 RPN1P04843 607 aaKnown RBP16.21■□□□□ 0.19
CLDN18-203ENST00000479660 NF2P35240 595 aa16.21■□□□□ 0.19
CLDN18-203ENST00000479660 HSD17B4P51659 736 aa16.21■□□□□ 0.19
CLDN18-203ENST00000479660 GRB10Q13322 594 aa16.21■□□□□ 0.19
CLDN18-203ENST00000479660 RBM46Q8TBY0 533 aaKnown RBP16.21■□□□□ 0.19
CLDN18-203ENST00000479660 FAM20AQ96MK3 541 aa16.21■□□□□ 0.19
CLDN18-203ENST00000479660 NUDT12Q9BQG2 462 aa16.21■□□□□ 0.19
CLDN18-203ENST00000479660 HOMER2Q9NSB8 354 aa16.21■□□□□ 0.19
CLDN18-203ENST00000479660 RMND1Q9NWS8 449 aa16.21■□□□□ 0.19
CLDN18-203ENST00000479660 DSG3P32926 999 aa16.21■□□□□ 0.18
CLDN18-203ENST00000479660 COG2Q14746 738 aa16.21■□□□□ 0.18
CLDN18-203ENST00000479660 EAPPQ56P03 285 aaPredicted RBP16.21■□□□□ 0.18
CLDN18-203ENST00000479660 WNK4Q96J92 1243 aa16.21■□□□□ 0.18
CLDN18-203ENST00000479660 PNMA5Q96PV4 448 aa16.21■□□□□ 0.18
CLDN18-203ENST00000479660 IQCA1LA6NCM1 817 aa16.2■□□□□ 0.18
CLDN18-203ENST00000479660 MSH4O15457 936 aa16.2■□□□□ 0.18
CLDN18-203ENST00000479660 UBXN2AP68543 259 aa16.2■□□□□ 0.18
CLDN18-203ENST00000479660 AMPD3Q01432 767 aa16.2■□□□□ 0.18
CLDN18-203ENST00000479660 CT47A1Q5JQC4 288 aaPredicted RBP16.2■□□□□ 0.18
CLDN18-203ENST00000479660 CATSPERGQ6ZRH7 1159 aa16.2■□□□□ 0.18
CLDN18-203ENST00000479660 SPC24Q8NBT2 197 aa16.2■□□□□ 0.18
CLDN18-203ENST00000479660 CDCA5Q96FF9 252 aa16.2■□□□□ 0.18
CLDN18-203ENST00000479660 TAF1DQ9H5J8 278 aaPredicted RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms