RNA–Protein interactions for RNA: ENST00000479539.1

SP140-210, Transcript of SP140 nuclear body protein, humanhuman

TSL 5

Gene SP140, Length 550 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-210ENST00000479539 IWS1Q96ST2 819 aa12.21□□□□□ -0.45
SP140-210ENST00000479539 RMDN3Q96TC7 470 aa12.21□□□□□ -0.45
SP140-210ENST00000479539 GDF15Q99988 308 aa12.21□□□□□ -0.45
SP140-210ENST00000479539 WDR11Q9BZH6 1224 aa12.21□□□□□ -0.45
SP140-210ENST00000479539 SNX14Q9Y5W7 946 aa12.21□□□□□ -0.45
SP140-210ENST00000479539 TRIOBPQ9H2D6 2365 aa12.2□□□□□ -0.46
SP140-210ENST00000479539 PLEKHA8P1O95397 391 aa12.2□□□□□ -0.46
SP140-210ENST00000479539 CFBP00751 764 aa12.2□□□□□ -0.46
SP140-210ENST00000479539 ASGR1P07306 291 aa12.2□□□□□ -0.46
SP140-210ENST00000479539 SYN1P17600 705 aa12.2□□□□□ -0.46
SP140-210ENST00000479539 RXRAP19793 462 aa12.2□□□□□ -0.46
SP140-210ENST00000479539 BMP8BP34820 402 aa12.2□□□□□ -0.46
SP140-210ENST00000479539 TRIM60Q495X7 471 aa12.2□□□□□ -0.46
SP140-210ENST00000479539 SYNE3Q6ZMZ3 975 aa12.2□□□□□ -0.46
SP140-210ENST00000479539 TLK2Q86UE8 772 aa12.2□□□□□ -0.46
SP140-210ENST00000479539 RRP36Q96EU6 259 aaKnown RBP12.2□□□□□ -0.46
SP140-210ENST00000479539 TCEANC2Q96MN5 208 aa12.2□□□□□ -0.46
SP140-210ENST00000479539 AP5M1Q9H0R1 490 aa12.2□□□□□ -0.46
SP140-210ENST00000479539 RBM27Q9P2N5 1060 aaKnown RBP12.2□□□□□ -0.46
SP140-210ENST00000479539 BRPF3Q9ULD4 1205 aa12.2□□□□□ -0.46
SP140-210ENST00000479539 ATP11BQ9Y2G3 1177 aa12.2□□□□□ -0.46
SP140-210ENST00000479539 GCOM1H8Y6P7 765 aaPredicted RBP12.19□□□□□ -0.46
SP140-210ENST00000479539 NKRFO15226 690 aaKnown RBP eCLIP12.19□□□□□ -0.46
SP140-210ENST00000479539 NR3C2P08235 984 aa12.19□□□□□ -0.46
SP140-210ENST00000479539 POLR2MP0CAP2 368 aa12.19□□□□□ -0.46
SP140-210ENST00000479539 PTGS1P23219 599 aa12.19□□□□□ -0.46
SP140-210ENST00000479539 CDK7P50613 346 aa12.19□□□□□ -0.46
SP140-210ENST00000479539 RCAN1P53805 252 aa12.19□□□□□ -0.46
SP140-210ENST00000479539 BEX3Q00994 111 aa12.19□□□□□ -0.46
SP140-210ENST00000479539 TLE2Q04725 743 aa12.19□□□□□ -0.46
SP140-210ENST00000479539 STXBP2Q15833 593 aa12.19□□□□□ -0.46
SP140-210ENST00000479539 FSCN1Q16658 493 aaKnown RBP12.19□□□□□ -0.46
SP140-210ENST00000479539 ARHGEF16Q5VV41 709 aa12.19□□□□□ -0.46
SP140-210ENST00000479539 APOA5Q6Q788 366 aa12.19□□□□□ -0.46
SP140-210ENST00000479539 TMTC3Q6ZXV5 915 aa12.19□□□□□ -0.46
SP140-210ENST00000479539 FBXL16Q8N461 479 aa12.19□□□□□ -0.46
SP140-210ENST00000479539 SCFD2Q8WU76 684 aa12.19□□□□□ -0.46
SP140-210ENST00000479539 PIBF1Q8WXW3 757 aa12.19□□□□□ -0.46
SP140-210ENST00000479539 GLT1D1Q96MS3 346 aa12.19□□□□□ -0.46
SP140-210ENST00000479539 TOX2Q96NM4 488 aa12.19□□□□□ -0.46
SP140-210ENST00000479539 USP26Q9BXU7 913 aa12.19□□□□□ -0.46
SP140-210ENST00000479539 STARD7Q9NQZ5 370 aa12.19□□□□□ -0.46
SP140-210ENST00000479539 PXMP2Q9NR77 195 aa12.19□□□□□ -0.46
SP140-210ENST00000479539 ZNFX1Q9P2E3 1918 aaKnown RBP12.19□□□□□ -0.46
SP140-210ENST00000479539 A0A1W2PPC1 479 aa12.18□□□□□ -0.46
SP140-210ENST00000479539 ZEB2O60315 1214 aa12.18□□□□□ -0.46
SP140-210ENST00000479539 EIF3JO75822 258 aaKnown RBP12.18□□□□□ -0.46
SP140-210ENST00000479539 CABYRO75952 493 aa12.18□□□□□ -0.46
SP140-210ENST00000479539 EIF2AK2P19525 551 aaKnown RBP12.18□□□□□ -0.46
SP140-210ENST00000479539 PSMA5P28066 241 aa12.18□□□□□ -0.46
SP140-210ENST00000479539 HOXA13P31271 388 aaPredicted RBP12.18□□□□□ -0.46
SP140-210ENST00000479539 MAGEA10P43363 369 aaPredicted RBP12.18□□□□□ -0.46
SP140-210ENST00000479539 CCDC62Q6P9F0 684 aa12.18□□□□□ -0.46
SP140-210ENST00000479539 ANKRD33Q7Z3H0 272 aa12.18□□□□□ -0.46
SP140-210ENST00000479539 VSIG10LQ86VR7 867 aa12.18□□□□□ -0.46
SP140-210ENST00000479539 MICU3Q86XE3 530 aa12.18□□□□□ -0.46
SP140-210ENST00000479539 RAB11FIP4Q86YS3 637 aa12.18□□□□□ -0.46
SP140-210ENST00000479539 CMTR1Q8N1G2 835 aaKnown RBP12.18□□□□□ -0.46
SP140-210ENST00000479539 JAKMIP1Q96N16 626 aaKnown RBP12.18□□□□□ -0.46
SP140-210ENST00000479539 PDCD2LQ9BRP1 358 aa12.18□□□□□ -0.46
SP140-210ENST00000479539 RBM28Q9NW13 759 aaKnown RBP12.18□□□□□ -0.46
SP140-210ENST00000479539 SMCHD1A6NHR9 2005 aa12.17□□□□□ -0.46
SP140-210ENST00000479539 ARVCFO00192 962 aa12.17□□□□□ -0.46
SP140-210ENST00000479539 ZBTB43O43298 467 aa12.17□□□□□ -0.46
SP140-210ENST00000479539 ARIH2O95376 493 aa12.17□□□□□ -0.46
SP140-210ENST00000479539 TXNP10599 105 aaKnown RBP12.17□□□□□ -0.46
SP140-210ENST00000479539 CPA1P15085 419 aa12.17□□□□□ -0.46
SP140-210ENST00000479539 FUT2Q10981 343 aa12.17□□□□□ -0.46
SP140-210ENST00000479539 TTLL4Q14679 1199 aa12.17□□□□□ -0.46
SP140-210ENST00000479539 PPP2R5BQ15173 497 aa12.17□□□□□ -0.46
SP140-210ENST00000479539 BLOC1S2Q6QNY1 142 aa12.17□□□□□ -0.46
SP140-210ENST00000479539 CXCL17Q6UXB2 119 aa12.17□□□□□ -0.46
SP140-210ENST00000479539 SLC43A3Q8NBI5 491 aa12.17□□□□□ -0.46
SP140-210ENST00000479539 AGXT2Q9BYV1 514 aa12.17□□□□□ -0.46
SP140-210ENST00000479539 PDLIM7Q9NR12 457 aa12.17□□□□□ -0.46
SP140-210ENST00000479539 FAM217BQ9NTX9 383 aaPredicted RBP12.17□□□□□ -0.46
SP140-210ENST00000479539 PRKAG2Q9UGJ0 569 aa12.17□□□□□ -0.46
SP140-210ENST00000479539 SEC63Q9UGP8 760 aaKnown RBP12.17□□□□□ -0.46
SP140-210ENST00000479539 A0A0U1RQG5 324 aaPredicted RBP12.16□□□□□ -0.46
SP140-210ENST00000479539 KLF18A0A0U1RQI7 1052 aa12.16□□□□□ -0.46
SP140-210ENST00000479539 TRIM43BA6NCK2 446 aa12.16□□□□□ -0.46
SP140-210ENST00000479539 A6NJR5 290 aa12.16□□□□□ -0.46
SP140-210ENST00000479539 PIK3CDO00329 1044 aa12.16□□□□□ -0.46
SP140-210ENST00000479539 RGS20O76081 388 aa12.16□□□□□ -0.46
SP140-210ENST00000479539 RPS6KB1P23443 525 aa12.16□□□□□ -0.46
SP140-210ENST00000479539 RTN1Q16799 776 aa12.16□□□□□ -0.46
SP140-210ENST00000479539 Q6ZUG5 572 aa12.16□□□□□ -0.46
SP140-210ENST00000479539 CCDC82Q8N4S0 544 aa12.16□□□□□ -0.46
SP140-210ENST00000479539 OR6J1Q8NGC5 347 aa12.16□□□□□ -0.46
SP140-210ENST00000479539 COPS5Q92905 334 aa12.16□□□□□ -0.46
SP140-210ENST00000479539 VTI1AQ96AJ9 217 aa12.16□□□□□ -0.46
SP140-210ENST00000479539 TRIM43Q96BQ3 446 aaPredicted RBP12.16□□□□□ -0.46
SP140-210ENST00000479539 SEZ6LQ9BYH1 1024 aa12.16□□□□□ -0.46
SP140-210ENST00000479539 GRIN2DO15399 1336 aa12.15□□□□□ -0.46
SP140-210ENST00000479539 hCG_1642624A0A1W2PR95 340 aa12.15□□□□□ -0.46
SP140-210ENST00000479539 DCDC2CA8MYV0 355 aa12.15□□□□□ -0.46
SP140-210ENST00000479539 MEIS2O14770 477 aa12.15□□□□□ -0.46
SP140-210ENST00000479539 KIAA0355O15063 1070 aa12.15□□□□□ -0.46
SP140-210ENST00000479539 PQBP1O60828 265 aaKnown RBP12.15□□□□□ -0.46
SP140-210ENST00000479539 CLTBP09497 229 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms