RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 CSGALNACT2Q8N6G5 542 aa14.8□□□□□ -0.04
PDZRN3-208ENST00000479530 RASSF8Q8NHQ8 419 aa14.8□□□□□ -0.04
PDZRN3-208ENST00000479530 CCDC194A0A1B0GVG4 234 aa14.79□□□□□ -0.04
PDZRN3-208ENST00000479530 EPHB6O15197 1021 aa14.79□□□□□ -0.04
PDZRN3-208ENST00000479530 NCK2O43639 380 aa14.79□□□□□ -0.04
PDZRN3-208ENST00000479530 MMP14P50281 582 aa14.79□□□□□ -0.04
PDZRN3-208ENST00000479530 KIF5AQ12840 1032 aa14.79□□□□□ -0.04
PDZRN3-208ENST00000479530 PDCLQ13371 301 aa14.79□□□□□ -0.04
PDZRN3-208ENST00000479530 KCTD16Q68DU8 428 aa14.79□□□□□ -0.04
PDZRN3-208ENST00000479530 KCNV1Q6PIU1 500 aa14.79□□□□□ -0.04
PDZRN3-208ENST00000479530 FAM196AQ6ZSG2 479 aa14.79□□□□□ -0.04
PDZRN3-208ENST00000479530 HPS3Q969F9 1004 aa14.79□□□□□ -0.04
PDZRN3-208ENST00000479530 SH3GL2Q99962 352 aa14.79□□□□□ -0.04
PDZRN3-208ENST00000479530 UBA5Q9GZZ9 404 aa14.79□□□□□ -0.04
PDZRN3-208ENST00000479530 THAP9Q9H5L6 903 aa14.79□□□□□ -0.04
PDZRN3-208ENST00000479530 SLURP2P0DP57 97 aa14.79□□□□□ -0.04
PDZRN3-208ENST00000479530 RFC4P35249 363 aa14.79□□□□□ -0.04
PDZRN3-208ENST00000479530 VAV2P52735 878 aa14.79□□□□□ -0.04
PDZRN3-208ENST00000479530 MIIPQ5JXC2 388 aa14.79□□□□□ -0.04
PDZRN3-208ENST00000479530 ANKRD40Q6AI12 368 aa14.79□□□□□ -0.04
PDZRN3-208ENST00000479530 DTHD1Q6ZMT9 781 aa14.79□□□□□ -0.04
PDZRN3-208ENST00000479530 RTFDC1Q9BY42 306 aaPredicted RBP14.79□□□□□ -0.04
PDZRN3-208ENST00000479530 YY1AP1Q9H869 796 aa14.79□□□□□ -0.04
PDZRN3-208ENST00000479530 MAGEC2Q9UBF1 373 aaPredicted RBP14.79□□□□□ -0.04
PDZRN3-208ENST00000479530 SALL4Q9UJQ4 1053 aa14.79□□□□□ -0.04
PDZRN3-208ENST00000479530 LOC102724159A0A0B4J2E5 919 aa14.79□□□□□ -0.04
PDZRN3-208ENST00000479530 KLRF2D3W0D1 207 aa14.79□□□□□ -0.04
PDZRN3-208ENST00000479530 IPO7O95373 1038 aaKnown RBP14.79□□□□□ -0.04
PDZRN3-208ENST00000479530 BTDP43251 543 aa14.79□□□□□ -0.04
PDZRN3-208ENST00000479530 ZBED6P86452 979 aa14.79□□□□□ -0.04
PDZRN3-208ENST00000479530 GRAPQ13588 217 aa14.79□□□□□ -0.04
PDZRN3-208ENST00000479530 PWP2Q15269 919 aaKnown RBP14.79□□□□□ -0.04
PDZRN3-208ENST00000479530 CLEC10AQ8IUN9 316 aa14.79□□□□□ -0.04
PDZRN3-208ENST00000479530 MMGT1Q8N4V1 131 aa14.79□□□□□ -0.04
PDZRN3-208ENST00000479530 ANKRD13CQ8N6S4 541 aa14.79□□□□□ -0.04
PDZRN3-208ENST00000479530 GIMAP8Q8ND71 665 aaPredicted RBP14.79□□□□□ -0.04
PDZRN3-208ENST00000479530 GRAPLQ8TC17 118 aaPredicted RBP14.79□□□□□ -0.04
PDZRN3-208ENST00000479530 DEF6Q9H4E7 631 aa14.79□□□□□ -0.04
PDZRN3-208ENST00000479530 ZNHIT6Q9NWK9 470 aaKnown RBP14.79□□□□□ -0.04
PDZRN3-208ENST00000479530 PALM3A6NDB9 673 aaPredicted RBP14.78□□□□□ -0.04
PDZRN3-208ENST00000479530 PSMA7O14818 248 aa14.78□□□□□ -0.04
PDZRN3-208ENST00000479530 KRT14P02533 472 aa14.78□□□□□ -0.04
PDZRN3-208ENST00000479530 CALML3P27482 149 aa14.78□□□□□ -0.04
PDZRN3-208ENST00000479530 LONP1P36776 959 aaKnown RBP14.78□□□□□ -0.04
PDZRN3-208ENST00000479530 ATP1A2P50993 1020 aa14.78□□□□□ -0.04
PDZRN3-208ENST00000479530 SPTY2D1Q68D10 685 aaPredicted RBP14.78□□□□□ -0.04
PDZRN3-208ENST00000479530 SUGP1Q8IWZ8 645 aaKnown RBP14.78□□□□□ -0.04
PDZRN3-208ENST00000479530 CCDC170Q8IYT3 715 aa14.78□□□□□ -0.04
PDZRN3-208ENST00000479530 WDR66Q8TBY9 1149 aa14.78□□□□□ -0.04
PDZRN3-208ENST00000479530 ANKS1AQ92625 1134 aa14.78□□□□□ -0.04
PDZRN3-208ENST00000479530 CNOT6LQ96LI5 555 aaKnown RBP14.78□□□□□ -0.04
PDZRN3-208ENST00000479530 LRRC4BQ9NT99 713 aa14.78□□□□□ -0.04
PDZRN3-208ENST00000479530 BARHL2Q9NY43 387 aa14.78□□□□□ -0.04
PDZRN3-208ENST00000479530 ARHGAP20Q9P2F6 1191 aa14.78□□□□□ -0.04
PDZRN3-208ENST00000479530 FCER1AP12319 257 aa14.78□□□□□ -0.04
PDZRN3-208ENST00000479530 ERCC3P19447 782 aa14.78□□□□□ -0.04
PDZRN3-208ENST00000479530 CDK8P49336 464 aa14.78□□□□□ -0.04
PDZRN3-208ENST00000479530 STK4Q13043 487 aa14.78□□□□□ -0.04
PDZRN3-208ENST00000479530 LETM2Q2VYF4 491 aa14.78□□□□□ -0.04
PDZRN3-208ENST00000479530 ARL6IP4Q66PJ3 421 aaKnown RBP14.78□□□□□ -0.04
PDZRN3-208ENST00000479530 HAUS3Q68CZ6 603 aa14.78□□□□□ -0.04
PDZRN3-208ENST00000479530 AMOTL1Q8IY63 956 aa14.78□□□□□ -0.04
PDZRN3-208ENST00000479530 CCDC42Q96M95 316 aa14.78□□□□□ -0.04
PDZRN3-208ENST00000479530 OSBPL9Q96SU4 736 aa14.78□□□□□ -0.04
PDZRN3-208ENST00000479530 CASZ1Q86V15 1759 aa14.78□□□□□ -0.04
PDZRN3-208ENST00000479530 ZSCAN5CA6NGD5 496 aaPredicted RBP14.77□□□□□ -0.04
PDZRN3-208ENST00000479530 RHOBTB3O94955 611 aa14.77□□□□□ -0.04
PDZRN3-208ENST00000479530 HNRNPH1P31943 449 aaKnown RBP14.77□□□□□ -0.04
PDZRN3-208ENST00000479530 TXNRD1Q16881 649 aa14.77□□□□□ -0.04
PDZRN3-208ENST00000479530 IFIH1Q9BYX4 1025 aaKnown RBP14.77□□□□□ -0.04
PDZRN3-208ENST00000479530 TMEM260Q9NX78 707 aa14.77□□□□□ -0.04
PDZRN3-208ENST00000479530 KIAA1551Q9HCM1 1747 aa14.77□□□□□ -0.05
PDZRN3-208ENST00000479530 VPS72Q15906 364 aa14.77□□□□□ -0.05
PDZRN3-208ENST00000479530 C2CD5Q86YS7 1000 aa14.77□□□□□ -0.05
PDZRN3-208ENST00000479530 FNBP4Q8N3X1 1017 aaPredicted RBP14.77□□□□□ -0.05
PDZRN3-208ENST00000479530 MS4A14Q96JA4 679 aa14.77□□□□□ -0.05
PDZRN3-208ENST00000479530 PYM1Q9BRP8 204 aaKnown RBP14.77□□□□□ -0.05
PDZRN3-208ENST00000479530 NOC4LQ9BVI4 516 aaKnown RBP14.77□□□□□ -0.05
PDZRN3-208ENST00000479530 SH2D4AQ9H788 454 aa14.77□□□□□ -0.05
PDZRN3-208ENST00000479530 CD209Q9NNX6 404 aa14.77□□□□□ -0.05
PDZRN3-208ENST00000479530 PCDHA13Q9Y5I0 950 aa14.77□□□□□ -0.05
PDZRN3-208ENST00000479530 ESYT3A0FGR9 886 aa14.76□□□□□ -0.05
PDZRN3-208ENST00000479530 UFL1O94874 794 aa14.76□□□□□ -0.05
PDZRN3-208ENST00000479530 UBA7P41226 1012 aa14.76□□□□□ -0.05
PDZRN3-208ENST00000479530 MTIF2P46199 727 aaKnown RBP14.76□□□□□ -0.05
PDZRN3-208ENST00000479530 KCNB1Q14721 858 aa14.76□□□□□ -0.05
PDZRN3-208ENST00000479530 TRAPPC3LQ5T215 181 aa14.76□□□□□ -0.05
PDZRN3-208ENST00000479530 PRR5LQ6MZQ0 368 aa14.76□□□□□ -0.05
PDZRN3-208ENST00000479530 CNBD1Q8NA66 436 aa14.76□□□□□ -0.05
PDZRN3-208ENST00000479530 CEP95Q96GE4 821 aa14.76□□□□□ -0.05
PDZRN3-208ENST00000479530 ZIM3Q96PE6 472 aa14.76□□□□□ -0.05
PDZRN3-208ENST00000479530 EYA3Q99504 573 aa14.76□□□□□ -0.05
PDZRN3-208ENST00000479530 TNRC6CQ9HCJ0 1690 aaKnown RBP14.76□□□□□ -0.05
PDZRN3-208ENST00000479530 FAM207AQ9NSI2 230 aaPredicted RBP14.76□□□□□ -0.05
PDZRN3-208ENST00000479530 RBM12Q9NTZ6 932 aaKnown RBP14.76□□□□□ -0.05
PDZRN3-208ENST00000479530 KBTBD4Q9NVX7 518 aa14.76□□□□□ -0.05
PDZRN3-208ENST00000479530 CCNT1O60563 726 aaKnown RBP14.76□□□□□ -0.05
PDZRN3-208ENST00000479530 PLCG1P19174 1290 aa14.76□□□□□ -0.05
PDZRN3-208ENST00000479530 EIF6P56537 245 aaKnown RBP14.76□□□□□ -0.05
PDZRN3-208ENST00000479530 PPP4CP60510 307 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms