RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 CALML3P27482 149 aa19■□□□□ 0.63
DDX56-210ENST00000479440 MRPL12P52815 198 aaKnown RBP19■□□□□ 0.63
DDX56-210ENST00000479440 WDR5P61964 334 aaKnown RBP19■□□□□ 0.63
DDX56-210ENST00000479440 SYDE2Q5VT97 1194 aa19■□□□□ 0.63
DDX56-210ENST00000479440 TSHZ3Q63HK5 1081 aa19■□□□□ 0.63
DDX56-210ENST00000479440 KHSRPQ92945 711 aaKnown RBP eCLIP19■□□□□ 0.63
DDX56-210ENST00000479440 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19■□□□□ 0.63
DDX56-210ENST00000479440 PTGISQ16647 500 aa18.99■□□□□ 0.63
DDX56-210ENST00000479440 CNKSR3Q6P9H4 555 aa18.99■□□□□ 0.63
DDX56-210ENST00000479440 BTNL9Q6UXG8 535 aa18.99■□□□□ 0.63
DDX56-210ENST00000479440 RNF207Q6ZRF8 634 aa18.99■□□□□ 0.63
DDX56-210ENST00000479440 DNERQ8NFT8 737 aa18.99■□□□□ 0.63
DDX56-210ENST00000479440 IL17RBQ9NRM6 502 aa18.99■□□□□ 0.63
DDX56-210ENST00000479440 NMT2O60551 498 aa18.98■□□□□ 0.63
DDX56-210ENST00000479440 EDNRBP24530 442 aa18.98■□□□□ 0.63
DDX56-210ENST00000479440 LRRC8DQ7L1W4 858 aa18.98■□□□□ 0.63
DDX56-210ENST00000479440 SPRED2Q7Z698 418 aa18.98■□□□□ 0.63
DDX56-210ENST00000479440 PPP1R13LQ8WUF5 828 aa18.98■□□□□ 0.63
DDX56-210ENST00000479440 FSD1Q9BTV5 496 aa18.98■□□□□ 0.63
DDX56-210ENST00000479440 UBE2ZQ9H832 354 aaPredicted RBP18.98■□□□□ 0.63
DDX56-210ENST00000479440 TRANK1O15050 2925 aa18.98■□□□□ 0.63
DDX56-210ENST00000479440 LCHNA4D1U4 455 aa18.97■□□□□ 0.63
DDX56-210ENST00000479440 PRR33A8MZF0 331 aa18.97■□□□□ 0.63
DDX56-210ENST00000479440 EFCAB14O75071 495 aa18.97■□□□□ 0.63
DDX56-210ENST00000479440 TXNP10599 105 aaKnown RBP18.97■□□□□ 0.63
DDX56-210ENST00000479440 SELPP16109 830 aa18.97■□□□□ 0.63
DDX56-210ENST00000479440 SLC16A2P36021 539 aa18.97■□□□□ 0.63
DDX56-210ENST00000479440 NOVP48745 357 aa18.97■□□□□ 0.63
DDX56-210ENST00000479440 CHMP4BP1P59074 171 aa18.97■□□□□ 0.63
DDX56-210ENST00000479440 SESTD1Q86VW0 696 aa18.97■□□□□ 0.63
DDX56-210ENST00000479440 TGS1Q96RS0 853 aaKnown RBP18.97■□□□□ 0.63
DDX56-210ENST00000479440 SEC62Q99442 399 aaKnown RBP18.97■□□□□ 0.63
DDX56-210ENST00000479440 PTPRSQ13332 1948 aa18.96■□□□□ 0.63
DDX56-210ENST00000479440 RANBP6O60518 1105 aaKnown RBP18.96■□□□□ 0.63
DDX56-210ENST00000479440 RPS6P62753 249 aaKnown RBP18.96■□□□□ 0.63
DDX56-210ENST00000479440 CTDSPL2Q05D32 466 aa18.96■□□□□ 0.63
DDX56-210ENST00000479440 RBL2Q08999 1139 aa18.96■□□□□ 0.63
DDX56-210ENST00000479440 TTBK2Q6IQ55 1244 aa18.96■□□□□ 0.63
DDX56-210ENST00000479440 COPS5Q92905 334 aa18.96■□□□□ 0.63
DDX56-210ENST00000479440 CRBNQ96SW2 442 aa18.96■□□□□ 0.63
DDX56-210ENST00000479440 RAD9AQ99638 391 aa18.96■□□□□ 0.63
DDX56-210ENST00000479440 FRMPD2Q68DX3 1309 aaPredicted RBP18.96■□□□□ 0.63
DDX56-210ENST00000479440 TTC41PQ6P2S7 1318 aa18.96■□□□□ 0.63
DDX56-210ENST00000479440 WDR19Q8NEZ3 1342 aa18.96■□□□□ 0.63
DDX56-210ENST00000479440 ABHD14A-ACY1A0A1B0GW23 586 aa18.95■□□□□ 0.62
DDX56-210ENST00000479440 GJB5O95377 273 aa18.95■□□□□ 0.62
DDX56-210ENST00000479440 MMP3P08254 477 aa18.95■□□□□ 0.62
DDX56-210ENST00000479440 ERVK-21P61565 698 aa18.95■□□□□ 0.62
DDX56-210ENST00000479440 DEFB103AP81534 67 aa18.95■□□□□ 0.62
DDX56-210ENST00000479440 LEXMQ3ZCV2 418 aa18.95■□□□□ 0.62
DDX56-210ENST00000479440 ZMYM1Q5SVZ6 1142 aa18.95■□□□□ 0.62
DDX56-210ENST00000479440 GJD3Q8N144 294 aa18.95■□□□□ 0.62
DDX56-210ENST00000479440 CLEC4DQ8WXI8 215 aa18.95■□□□□ 0.62
DDX56-210ENST00000479440 MTUS1Q9ULD2 1270 aa18.95■□□□□ 0.62
DDX56-210ENST00000479440 ORC4O43929 436 aa18.94■□□□□ 0.62
DDX56-210ENST00000479440 CXCL10P02778 98 aa18.94■□□□□ 0.62
DDX56-210ENST00000479440 TOP1P11387 765 aaKnown RBP18.94■□□□□ 0.62
DDX56-210ENST00000479440 SSTR3P32745 418 aaPredicted RBP18.94■□□□□ 0.62
DDX56-210ENST00000479440 GDF6Q6KF10 455 aaPredicted RBP18.94■□□□□ 0.62
DDX56-210ENST00000479440 TMCO2Q7Z6W1 182 aaPredicted RBP18.94■□□□□ 0.62
DDX56-210ENST00000479440 FAM178BQ8IXR5 827 aa18.94■□□□□ 0.62
DDX56-210ENST00000479440 SUGCTQ9HAC7 445 aa18.94■□□□□ 0.62
DDX56-210ENST00000479440 GPCPD1Q9NPB8 672 aa18.94■□□□□ 0.62
DDX56-210ENST00000479440 CD320Q9NPF0 282 aa18.94■□□□□ 0.62
DDX56-210ENST00000479440 ANAPC4Q9UJX5 808 aa18.94■□□□□ 0.62
DDX56-210ENST00000479440 LINC01553A4QN01 128 aa18.93■□□□□ 0.62
DDX56-210ENST00000479440 ALADP13716 330 aa18.93■□□□□ 0.62
DDX56-210ENST00000479440 ALYREFQ86V81 257 aaKnown RBP18.93■□□□□ 0.62
DDX56-210ENST00000479440 KATNAL1Q9BW62 490 aa18.93■□□□□ 0.62
DDX56-210ENST00000479440 TOMM22Q9NS69 142 aa18.93■□□□□ 0.62
DDX56-210ENST00000479440 SIP14410 1827 aa18.93■□□□□ 0.62
DDX56-210ENST00000479440 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.92■□□□□ 0.62
DDX56-210ENST00000479440 ARIH2O95376 493 aa18.92■□□□□ 0.62
DDX56-210ENST00000479440 GH1P01241 217 aa18.92■□□□□ 0.62
DDX56-210ENST00000479440 CKBP12277 381 aa18.92■□□□□ 0.62
DDX56-210ENST00000479440 KCNA5P22460 613 aa18.92■□□□□ 0.62
DDX56-210ENST00000479440 CSPP1Q1MSJ5 1256 aa18.92■□□□□ 0.62
DDX56-210ENST00000479440 PUS10Q3MIT2 529 aaKnown RBP18.92■□□□□ 0.62
DDX56-210ENST00000479440 AFG1LQ8WV93 481 aa18.92■□□□□ 0.62
DDX56-210ENST00000479440 DHX38Q92620 1227 aaKnown RBP18.92■□□□□ 0.62
DDX56-210ENST00000479440 CTAGE1Q96RT6 745 aa18.92■□□□□ 0.62
DDX56-210ENST00000479440 TMEM47Q9BQJ4 181 aa18.92■□□□□ 0.62
DDX56-210ENST00000479440 GTF2IRD1Q9UHL9 959 aa18.92■□□□□ 0.62
DDX56-210ENST00000479440 NBNO60934 754 aa18.91■□□□□ 0.62
DDX56-210ENST00000479440 PDHBP11177 359 aa18.91■□□□□ 0.62
DDX56-210ENST00000479440 CASTP20810 708 aaKnown RBP18.91■□□□□ 0.62
DDX56-210ENST00000479440 IKBKEQ14164 716 aa18.91■□□□□ 0.62
DDX56-210ENST00000479440 GPNMBQ14956 572 aa18.91■□□□□ 0.62
DDX56-210ENST00000479440 PTCRAQ6ISU1 281 aaPredicted RBP18.91■□□□□ 0.62
DDX56-210ENST00000479440 C7orf31Q8N865 590 aa18.91■□□□□ 0.62
DDX56-210ENST00000479440 FBXO22Q8NEZ5 403 aa18.91■□□□□ 0.62
DDX56-210ENST00000479440 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.91■□□□□ 0.62
DDX56-210ENST00000479440 DCTPP1Q9H773 170 aa18.91■□□□□ 0.62
DDX56-210ENST00000479440 INCENPQ9NQS7 918 aa18.91■□□□□ 0.62
DDX56-210ENST00000479440 CTNNA3Q9UI47 895 aa18.91■□□□□ 0.62
DDX56-210ENST00000479440 FOXP2O15409 715 aa18.9■□□□□ 0.62
DDX56-210ENST00000479440 IL9P15248 144 aa18.9■□□□□ 0.62
DDX56-210ENST00000479440 DGKDQ16760 1214 aa18.9■□□□□ 0.62
DDX56-210ENST00000479440 PTPROQ16827 1216 aa18.9■□□□□ 0.62
DDX56-210ENST00000479440 RRP12Q5JTH9 1297 aaKnown RBP18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms