RNA–Protein interactions for RNA: ENST00000479430.5

COPS7B-220, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-220ENST00000479430 GRM8O00222 908 aa4.9□□□□□ -1.63
COPS7B-220ENST00000479430 WNT7AO00755 349 aa4.9□□□□□ -1.63
COPS7B-220ENST00000479430 VAMP4O75379 141 aa4.9□□□□□ -1.63
COPS7B-220ENST00000479430 POLR3DP05423 398 aaPredicted RBP4.9□□□□□ -1.63
COPS7B-220ENST00000479430 ACRP10323 421 aa4.9□□□□□ -1.63
COPS7B-220ENST00000479430 ZKSCAN1P17029 563 aaPredicted RBP4.9□□□□□ -1.63
COPS7B-220ENST00000479430 ADCYAP1R1P41586 468 aa4.9□□□□□ -1.63
COPS7B-220ENST00000479430 FAM110CQ1W6H9 321 aa4.9□□□□□ -1.63
COPS7B-220ENST00000479430 MAP3K21Q5TCX8 1036 aa4.9□□□□□ -1.63
COPS7B-220ENST00000479430 NXPE4Q6UWF7 544 aa4.9□□□□□ -1.63
COPS7B-220ENST00000479430 HHIPL2Q6UWX4 724 aa4.9□□□□□ -1.63
COPS7B-220ENST00000479430 GPR142Q7Z601 462 aa4.9□□□□□ -1.63
COPS7B-220ENST00000479430 CMTR1Q8N1G2 835 aaKnown RBP4.9□□□□□ -1.63
COPS7B-220ENST00000479430 ZNF384Q8TF68 577 aa4.9□□□□□ -1.63
COPS7B-220ENST00000479430 SUSD3Q96L08 255 aa4.9□□□□□ -1.63
COPS7B-220ENST00000479430 RNPC3Q96LT9 517 aaKnown RBP4.9□□□□□ -1.63
COPS7B-220ENST00000479430 UHRF1Q96T88 793 aaPredicted RBP4.9□□□□□ -1.63
COPS7B-220ENST00000479430 KLF16Q9BXK1 252 aaPredicted RBP4.9□□□□□ -1.63
COPS7B-220ENST00000479430 GRIP2Q9C0E4 1043 aa4.9□□□□□ -1.63
COPS7B-220ENST00000479430 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.9□□□□□ -1.63
COPS7B-220ENST00000479430 NEUROD4Q9HD90 331 aa4.9□□□□□ -1.63
COPS7B-220ENST00000479430 PDLIM7Q9NR12 457 aa4.9□□□□□ -1.63
COPS7B-220ENST00000479430 RBPJLQ9UBG7 517 aa4.9□□□□□ -1.63
COPS7B-220ENST00000479430 ABCF2Q9UG63 623 aa4.9□□□□□ -1.63
COPS7B-220ENST00000479430 PA2G4Q9UQ80 394 aaKnown RBP4.9□□□□□ -1.63
COPS7B-220ENST00000479430 MYBBP1AQ9BQG0 1328 aaKnown RBP4.9□□□□□ -1.63
COPS7B-220ENST00000479430 RPAP1Q9BWH6 1393 aaPredicted RBP4.9□□□□□ -1.63
COPS7B-220ENST00000479430 BAZ2AQ9UIF9 1905 aaKnown RBP4.89□□□□□ -1.63
COPS7B-220ENST00000479430 BDP1A6H8Y1 2624 aa4.89□□□□□ -1.63
COPS7B-220ENST00000479430 CNMDO75829 334 aa4.89□□□□□ -1.63
COPS7B-220ENST00000479430 PDE8BO95263 885 aa4.89□□□□□ -1.63
COPS7B-220ENST00000479430 ZIC2O95409 532 aaPredicted RBP4.89□□□□□ -1.63
COPS7B-220ENST00000479430 RPLP1P05386 114 aaKnown RBP4.89□□□□□ -1.63
COPS7B-220ENST00000479430 MYOGP15173 224 aa4.89□□□□□ -1.63
COPS7B-220ENST00000479430 ATF4P18848 351 aaPredicted RBP4.89□□□□□ -1.63
COPS7B-220ENST00000479430 NCLP19338 710 aaKnown RBP4.89□□□□□ -1.63
COPS7B-220ENST00000479430 FGFR2P21802 821 aa4.89□□□□□ -1.63
COPS7B-220ENST00000479430 PTGS1P23219 599 aa4.89□□□□□ -1.63
COPS7B-220ENST00000479430 BTDP43251 543 aa4.89□□□□□ -1.63
COPS7B-220ENST00000479430 PHKA2P46019 1235 aa4.89□□□□□ -1.63
COPS7B-220ENST00000479430 PLA2G4AP47712 749 aa4.89□□□□□ -1.63
COPS7B-220ENST00000479430 RABGGTBP53611 331 aa4.89□□□□□ -1.63
COPS7B-220ENST00000479430 PAK2Q13177 524 aa4.89□□□□□ -1.63
COPS7B-220ENST00000479430 C4orf17Q53FE4 359 aa4.89□□□□□ -1.63
COPS7B-220ENST00000479430 CAVIN4Q5BKX8 364 aa4.89□□□□□ -1.63
COPS7B-220ENST00000479430 XKR5Q6UX68 686 aa4.89□□□□□ -1.63
COPS7B-220ENST00000479430 SLC39A5Q6ZMH5 540 aa4.89□□□□□ -1.63
COPS7B-220ENST00000479430 CCDC129Q6ZRS4 1044 aa4.89□□□□□ -1.63
COPS7B-220ENST00000479430 TET1Q8NFU7 2136 aa4.89□□□□□ -1.63
COPS7B-220ENST00000479430 RHPN1Q8TCX5 695 aa4.89□□□□□ -1.63
COPS7B-220ENST00000479430 RHBDD1Q8TEB9 315 aa4.89□□□□□ -1.63
COPS7B-220ENST00000479430 HSH2DQ96JZ2 352 aa4.89□□□□□ -1.63
COPS7B-220ENST00000479430 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.89□□□□□ -1.63
COPS7B-220ENST00000479430 LRFN3Q9BTN0 628 aa4.89□□□□□ -1.63
COPS7B-220ENST00000479430 ZFAND3Q9H8U3 227 aa4.89□□□□□ -1.63
COPS7B-220ENST00000479430 CERS4Q9HA82 394 aa4.89□□□□□ -1.63
COPS7B-220ENST00000479430 CWC22Q9HCG8 908 aaKnown RBP4.89□□□□□ -1.63
COPS7B-220ENST00000479430 FAM13BQ9NYF5 915 aa4.89□□□□□ -1.63
COPS7B-220ENST00000479430 TMEM63CQ9P1W3 806 aa4.89□□□□□ -1.63
COPS7B-220ENST00000479430 SAP30BPQ9UHR5 308 aaKnown RBP4.89□□□□□ -1.63
COPS7B-220ENST00000479430 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.89□□□□□ -1.63
COPS7B-220ENST00000479430 TMA7Q9Y2S6 64 aaKnown RBP4.89□□□□□ -1.63
COPS7B-220ENST00000479430 FANCIQ9NVI1 1328 aa4.89□□□□□ -1.63
COPS7B-220ENST00000479430 CHD7Q9P2D1 2997 aa4.89□□□□□ -1.63
COPS7B-220ENST00000479430 GIPC1O14908 333 aa4.88□□□□□ -1.63
COPS7B-220ENST00000479430 CTNND1O60716 968 aaKnown RBP4.88□□□□□ -1.63
COPS7B-220ENST00000479430 PQBP1O60828 265 aaKnown RBP4.88□□□□□ -1.63
COPS7B-220ENST00000479430 STK10O94804 968 aaKnown RBP4.88□□□□□ -1.63
COPS7B-220ENST00000479430 FGRP09769 529 aa4.88□□□□□ -1.63
COPS7B-220ENST00000479430 USP17L7P0C7H9 530 aa4.88□□□□□ -1.63
COPS7B-220ENST00000479430 TAL1P17542 331 aaPredicted RBP4.88□□□□□ -1.63
COPS7B-220ENST00000479430 IDH3AP50213 366 aa4.88□□□□□ -1.63
COPS7B-220ENST00000479430 TIMM10P62072 90 aa4.88□□□□□ -1.63
COPS7B-220ENST00000479430 HERVK_113P62684 666 aa4.88□□□□□ -1.63
COPS7B-220ENST00000479430 ERVK-24P63145 666 aa4.88□□□□□ -1.63
COPS7B-220ENST00000479430 IRX3P78415 501 aaPredicted RBP4.88□□□□□ -1.63
COPS7B-220ENST00000479430 TLE2Q04725 743 aa4.88□□□□□ -1.63
COPS7B-220ENST00000479430 TRIP4Q15650 581 aaPredicted RBP4.88□□□□□ -1.63
COPS7B-220ENST00000479430 FAM47AQ5JRC9 791 aa4.88□□□□□ -1.63
COPS7B-220ENST00000479430 FKBP1CQ5VVH2 108 aa4.88□□□□□ -1.63
COPS7B-220ENST00000479430 EGFLAMQ63HQ2 1017 aa4.88□□□□□ -1.63
COPS7B-220ENST00000479430 SDE2Q6IQ49 451 aa4.88□□□□□ -1.63
COPS7B-220ENST00000479430 ZNF438Q7Z4V0 828 aa4.88□□□□□ -1.63
COPS7B-220ENST00000479430 SPRED2Q7Z698 418 aa4.88□□□□□ -1.63
COPS7B-220ENST00000479430 PLEKHH3Q7Z736 793 aa4.88□□□□□ -1.63
COPS7B-220ENST00000479430 SH3RF3Q8TEJ3 882 aaPredicted RBP4.88□□□□□ -1.63
COPS7B-220ENST00000479430 TBC1D22AQ8WUA7 517 aa4.88□□□□□ -1.63
COPS7B-220ENST00000479430 PPP1R13LQ8WUF5 828 aa4.88□□□□□ -1.63
COPS7B-220ENST00000479430 USP6NLQ92738 828 aa4.88□□□□□ -1.63
COPS7B-220ENST00000479430 BCO2Q9BYV7 579 aa4.88□□□□□ -1.63
COPS7B-220ENST00000479430 NKX2-4Q9H2Z4 354 aa4.88□□□□□ -1.63
COPS7B-220ENST00000479430 ZNF576Q9H609 170 aa4.88□□□□□ -1.63
COPS7B-220ENST00000479430 DNAJC18Q9H819 358 aa4.88□□□□□ -1.63
COPS7B-220ENST00000479430 NPHS2Q9NP85 383 aa4.88□□□□□ -1.63
COPS7B-220ENST00000479430 BTBD7Q9P203 1132 aa4.88□□□□□ -1.63
COPS7B-220ENST00000479430 FAM8A1Q9UBU6 413 aa4.88□□□□□ -1.63
COPS7B-220ENST00000479430 DDX20Q9UHI6 824 aaKnown RBP4.88□□□□□ -1.63
COPS7B-220ENST00000479430 KCNMB2Q9Y691 235 aa4.88□□□□□ -1.63
COPS7B-220ENST00000479430 WASF2Q9Y6W5 498 aa4.88□□□□□ -1.63
COPS7B-220ENST00000479430 COL4A4P53420 1690 aaPredicted RBP4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms