RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 ATP2A2P16615 1042 aaKnown RBP23.4■■□□□ 1.34
SDF4-206ENST00000478938 PIP4K2AP48426 406 aaPredicted RBP23.4■■□□□ 1.34
SDF4-206ENST00000478938 PDIA5Q14554 519 aa23.4■■□□□ 1.34
SDF4-206ENST00000478938 WASHC4Q2M389 1173 aa23.4■■□□□ 1.34
SDF4-206ENST00000478938 NUGGCQ68CJ6 796 aa23.4■■□□□ 1.34
SDF4-206ENST00000478938 KIF2BQ8N4N8 673 aa23.4■■□□□ 1.34
SDF4-206ENST00000478938 XPO6Q96QU8 1125 aaKnown RBP23.4■■□□□ 1.34
SDF4-206ENST00000478938 FAM217BQ9NTX9 383 aaPredicted RBP23.4■■□□□ 1.34
SDF4-206ENST00000478938 MYH7P12883 1935 aa23.39■■□□□ 1.34
SDF4-206ENST00000478938 GOLGA8AA7E2F4 631 aa23.39■■□□□ 1.34
SDF4-206ENST00000478938 IGF2BP3O00425 579 aaKnown RBP eCLIP23.39■■□□□ 1.34
SDF4-206ENST00000478938 CNBD1Q8NA66 436 aa23.39■■□□□ 1.34
SDF4-206ENST00000478938 OXER1Q8TDS5 423 aa23.39■■□□□ 1.34
SDF4-206ENST00000478938 LRRD1A4D1F6 860 aa23.39■■□□□ 1.33
SDF4-206ENST00000478938 RAD51CO43502 376 aa23.39■■□□□ 1.33
SDF4-206ENST00000478938 NCALDP61601 193 aa23.39■■□□□ 1.33
SDF4-206ENST00000478938 TIMM10P62072 90 aa23.39■■□□□ 1.33
SDF4-206ENST00000478938 ANO7Q6IWH7 933 aa23.39■■□□□ 1.33
SDF4-206ENST00000478938 AATFQ9NY61 560 aaKnown RBP eCLIP23.39■■□□□ 1.33
SDF4-206ENST00000478938 STK38LQ9Y2H1 464 aa23.39■■□□□ 1.33
SDF4-206ENST00000478938 USP6P35125 1406 aa23.38■■□□□ 1.33
SDF4-206ENST00000478938 FAM205CA6NFA0 338 aa23.38■■□□□ 1.33
SDF4-206ENST00000478938 KIF5BP33176 963 aa23.38■■□□□ 1.33
SDF4-206ENST00000478938 TYW1BQ6NUM6 668 aa23.38■■□□□ 1.33
SDF4-206ENST00000478938 RUFY4Q6ZNE9 571 aa23.38■■□□□ 1.33
SDF4-206ENST00000478938 TRPM8Q7Z2W7 1104 aa23.38■■□□□ 1.33
SDF4-206ENST00000478938 RBM41Q96IZ5 413 aaKnown RBP23.38■■□□□ 1.33
SDF4-206ENST00000478938 ESF1Q9H501 851 aaKnown RBP23.38■■□□□ 1.33
SDF4-206ENST00000478938 ZBTB43O43298 467 aa23.38■■□□□ 1.33
SDF4-206ENST00000478938 KRT16P08779 473 aa23.38■■□□□ 1.33
SDF4-206ENST00000478938 CTDSPL2Q05D32 466 aa23.38■■□□□ 1.33
SDF4-206ENST00000478938 EEF2KMTQ96G04 330 aa23.38■■□□□ 1.33
SDF4-206ENST00000478938 FAM129AQ9BZQ8 928 aa23.38■■□□□ 1.33
SDF4-206ENST00000478938 CABP5Q9NP86 173 aa23.38■■□□□ 1.33
SDF4-206ENST00000478938 PDS5AQ29RF7 1337 aaKnown RBP23.38■■□□□ 1.33
SDF4-206ENST00000478938 ZNF213O14771 459 aa23.37■■□□□ 1.33
SDF4-206ENST00000478938 BUB1O43683 1085 aa23.37■■□□□ 1.33
SDF4-206ENST00000478938 LGR5O75473 907 aa23.37■■□□□ 1.33
SDF4-206ENST00000478938 UBOX5O94941 541 aa23.37■■□□□ 1.33
SDF4-206ENST00000478938 PDHA1P08559 390 aa23.37■■□□□ 1.33
SDF4-206ENST00000478938 CEBPAP49715 358 aaPredicted RBP23.37■■□□□ 1.33
SDF4-206ENST00000478938 SSRP1Q08945 709 aaKnown RBP23.37■■□□□ 1.33
SDF4-206ENST00000478938 ERMARDQ5T6L9 678 aa23.37■■□□□ 1.33
SDF4-206ENST00000478938 NCAPG2Q86XI2 1143 aa23.37■■□□□ 1.33
SDF4-206ENST00000478938 ZFAND2BQ8WV99 257 aa23.37■■□□□ 1.33
SDF4-206ENST00000478938 UBLCP1Q8WVY7 318 aaPredicted RBP23.37■■□□□ 1.33
SDF4-206ENST00000478938 PCMTD1Q96MG8 357 aaPredicted RBP23.37■■□□□ 1.33
SDF4-206ENST00000478938 SWAP70Q9UH65 585 aa23.37■■□□□ 1.33
SDF4-206ENST00000478938 NEURL1BA8MQ27 555 aa23.37■■□□□ 1.33
SDF4-206ENST00000478938 ECHS1P30084 290 aa23.37■■□□□ 1.33
SDF4-206ENST00000478938 PMS1P54277 932 aaKnown RBP23.37■■□□□ 1.33
SDF4-206ENST00000478938 ERVK-9P63128 1117 aa23.37■■□□□ 1.33
SDF4-206ENST00000478938 ZBED6P86452 979 aa23.37■■□□□ 1.33
SDF4-206ENST00000478938 DDX42Q86XP3 938 aaKnown RBP eCLIP23.37■■□□□ 1.33
SDF4-206ENST00000478938 KLHL7Q8IXQ5 586 aa23.37■■□□□ 1.33
SDF4-206ENST00000478938 ZNF317Q96PQ6 595 aaPredicted RBP23.37■■□□□ 1.33
SDF4-206ENST00000478938 UBAC1Q9BSL1 405 aa23.37■■□□□ 1.33
SDF4-206ENST00000478938 ADAM22Q9P0K1 906 aa23.37■■□□□ 1.33
SDF4-206ENST00000478938 AFF2P51816 1311 aa23.37■■□□□ 1.33
SDF4-206ENST00000478938 RARAP10276 462 aa23.36■■□□□ 1.33
SDF4-206ENST00000478938 PRCPP42785 496 aa23.36■■□□□ 1.33
SDF4-206ENST00000478938 ADAM9Q13443 819 aa23.36■■□□□ 1.33
SDF4-206ENST00000478938 GCKRQ14397 625 aa23.36■■□□□ 1.33
SDF4-206ENST00000478938 KLHDC7AQ5VTJ3 777 aa23.36■■□□□ 1.33
SDF4-206ENST00000478938 RIC3Q7Z5B4 369 aa23.36■■□□□ 1.33
SDF4-206ENST00000478938 ELAC2Q9BQ52 826 aaKnown RBP23.36■■□□□ 1.33
SDF4-206ENST00000478938 TRIM4Q9C037 500 aa23.36■■□□□ 1.33
SDF4-206ENST00000478938 METP08581 1390 aa23.36■■□□□ 1.33
SDF4-206ENST00000478938 IFI16Q16666 785 aaKnown RBP23.36■■□□□ 1.33
SDF4-206ENST00000478938 AGBL2Q5U5Z8 902 aa23.36■■□□□ 1.33
SDF4-206ENST00000478938 CCDC82Q8N4S0 544 aa23.36■■□□□ 1.33
SDF4-206ENST00000478938 MTMR8Q96EF0 704 aa23.36■■□□□ 1.33
SDF4-206ENST00000478938 SYT15Q9BQS2 421 aa23.36■■□□□ 1.33
SDF4-206ENST00000478938 ECT2Q9H8V3 914 aa23.36■■□□□ 1.33
SDF4-206ENST00000478938 WDR35Q9P2L0 1181 aa23.36■■□□□ 1.33
SDF4-206ENST00000478938 STK36Q9NRP7 1315 aa23.35■■□□□ 1.33
SDF4-206ENST00000478938 GPR75-ASB3A0A0A6YYF3 556 aa23.35■■□□□ 1.33
SDF4-206ENST00000478938 ECEL1O95672 775 aa23.35■■□□□ 1.33
SDF4-206ENST00000478938 CUL3Q13618 768 aa23.35■■□□□ 1.33
SDF4-206ENST00000478938 PROSER2Q86WR7 435 aaPredicted RBP23.35■■□□□ 1.33
SDF4-206ENST00000478938 TEX9Q8N6V9 391 aa23.35■■□□□ 1.33
SDF4-206ENST00000478938 PROCA1Q8NCQ7 364 aaPredicted RBP23.35■■□□□ 1.33
SDF4-206ENST00000478938 MTFR1LQ9H019 292 aa23.35■■□□□ 1.33
SDF4-206ENST00000478938 FBXL5Q9UKA1 691 aa23.35■■□□□ 1.33
SDF4-206ENST00000478938 ASB3Q9Y575 518 aa23.35■■□□□ 1.33
SDF4-206ENST00000478938 SLIT1O75093 1534 aa23.35■■□□□ 1.33
SDF4-206ENST00000478938 IFIT1P09914 478 aaKnown RBP23.35■■□□□ 1.33
SDF4-206ENST00000478938 ITIH4Q14624 930 aa23.35■■□□□ 1.33
SDF4-206ENST00000478938 NEUROG2Q9H2A3 272 aa23.35■■□□□ 1.33
SDF4-206ENST00000478938 PICK1Q9NRD5 415 aa23.35■■□□□ 1.33
SDF4-206ENST00000478938 PCMTD2Q9NV79 361 aa23.35■■□□□ 1.33
SDF4-206ENST00000478938 KDM3BQ7LBC6 1761 aa23.35■■□□□ 1.33
SDF4-206ENST00000478938 NWD1Q149M9 1564 aa23.34■■□□□ 1.33
SDF4-206ENST00000478938 SRGNP10124 158 aa23.34■■□□□ 1.33
SDF4-206ENST00000478938 ALDH3A1P30838 453 aa23.34■■□□□ 1.33
SDF4-206ENST00000478938 FLT3P36888 993 aa23.34■■□□□ 1.33
SDF4-206ENST00000478938 KRT71Q3SY84 523 aa23.34■■□□□ 1.33
SDF4-206ENST00000478938 LRRC23Q53EV4 343 aaPredicted RBP23.34■■□□□ 1.33
SDF4-206ENST00000478938 TBC1D10CQ8IV04 446 aa23.34■■□□□ 1.33
SDF4-206ENST00000478938 LRRC34Q8IZ02 419 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms