RNA–Protein interactions for RNA: ENST00000478887.1

SFI1-222, Transcript of SFI1 centrin binding protein, human

TSL 4

Gene SFI1, Length 662 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SFI1-222	ENST00000478887	CPLX1	O14810	134 aa		10.92	□□□□□ -0.66
SFI1-222	ENST00000478887	CAPN15	O75808	1086 aa		10.92	□□□□□ -0.66
SFI1-222	ENST00000478887	CDKL5	O76039	1030 aa		10.92	□□□□□ -0.66
SFI1-222	ENST00000478887	EN2	P19622	333 aa	Predicted RBP	10.92	□□□□□ -0.66
SFI1-222	ENST00000478887	CNGA1	P29973	690 aa		10.92	□□□□□ -0.66
SFI1-222	ENST00000478887	HOXA13	P31271	388 aa	Predicted RBP	10.92	□□□□□ -0.66
SFI1-222	ENST00000478887	RGS19	P49795	217 aa		10.92	□□□□□ -0.66
SFI1-222	ENST00000478887	NAPA	P54920	295 aa		10.92	□□□□□ -0.66
SFI1-222	ENST00000478887	NOL8	Q76FK4	1167 aa	Known RBP	10.92	□□□□□ -0.66
SFI1-222	ENST00000478887	TRIM22	Q8IYM9	498 aa		10.92	□□□□□ -0.66
SFI1-222	ENST00000478887	IWS1	Q96ST2	819 aa		10.92	□□□□□ -0.66
SFI1-222	ENST00000478887	RMDN3	Q96TC7	470 aa		10.92	□□□□□ -0.66
SFI1-222	ENST00000478887	MPHOSPH6	Q99547	160 aa	Known RBP	10.92	□□□□□ -0.66
SFI1-222	ENST00000478887	PDCD2L	Q9BRP1	358 aa		10.92	□□□□□ -0.66
SFI1-222	ENST00000478887	SLC26A6	Q9BXS9	759 aa		10.92	□□□□□ -0.66
SFI1-222	ENST00000478887	VTA1	Q9NP79	307 aa		10.92	□□□□□ -0.66
SFI1-222	ENST00000478887	PXMP2	Q9NR77	195 aa		10.92	□□□□□ -0.66
SFI1-222	ENST00000478887	ZHX1	Q9UKY1	873 aa	Predicted RBP	10.92	□□□□□ -0.66
SFI1-222	ENST00000478887	LIMCH1	Q9UPQ0	1083 aa		10.92	□□□□□ -0.66
SFI1-222	ENST00000478887	MYH6	P13533	1939 aa		10.92	□□□□□ -0.66
SFI1-222	ENST00000478887		B4DLN1	442 aa		10.91	□□□□□ -0.66
SFI1-222	ENST00000478887	DEXI	O95424	95 aa		10.91	□□□□□ -0.66
SFI1-222	ENST00000478887	CTDNEP1	O95476	244 aa		10.91	□□□□□ -0.66
SFI1-222	ENST00000478887	MRPL12	P52815	198 aa	Known RBP	10.91	□□□□□ -0.66
SFI1-222	ENST00000478887	AKAP17A	Q02040	695 aa	Known RBP	10.91	□□□□□ -0.66
SFI1-222	ENST00000478887	PDE4D	Q08499	809 aa		10.91	□□□□□ -0.66
SFI1-222	ENST00000478887	ST3GAL1	Q11201	340 aa		10.91	□□□□□ -0.66
SFI1-222	ENST00000478887	ARHGEF16	Q5VV41	709 aa		10.91	□□□□□ -0.66
SFI1-222	ENST00000478887	TAPT1	Q6NXT6	567 aa		10.91	□□□□□ -0.66
SFI1-222	ENST00000478887	USP17L6P	Q6QN14	398 aa		10.91	□□□□□ -0.66
SFI1-222	ENST00000478887	UBE2Q1	Q7Z7E8	422 aa		10.91	□□□□□ -0.66
SFI1-222	ENST00000478887	FBXO16	Q8IX29	292 aa	Predicted RBP	10.91	□□□□□ -0.66
SFI1-222	ENST00000478887	ANKLE1	Q8NAG6	615 aa		10.91	□□□□□ -0.66
SFI1-222	ENST00000478887	SMARCC2	Q8TAQ2	1214 aa		10.91	□□□□□ -0.66
SFI1-222	ENST00000478887	CUL5	Q93034	780 aa		10.91	□□□□□ -0.66
SFI1-222	ENST00000478887	GLT8D2	Q9H1C3	349 aa		10.91	□□□□□ -0.66
SFI1-222	ENST00000478887	PSTPIP2	Q9H939	334 aa		10.91	□□□□□ -0.66
SFI1-222	ENST00000478887	RIC8A	Q9NPQ8	531 aa		10.91	□□□□□ -0.66
SFI1-222	ENST00000478887	FAM184B	Q9ULE4	1060 aa		10.91	□□□□□ -0.66
SFI1-222	ENST00000478887	CENPF	P49454	3210 aa		10.9	□□□□□ -0.66
SFI1-222	ENST00000478887	RBM47	A0AV96	593 aa	Known RBP	10.9	□□□□□ -0.66
SFI1-222	ENST00000478887	ADCY6	O43306	1168 aa		10.9	□□□□□ -0.66
SFI1-222	ENST00000478887	PPFIA3	O75145	1194 aa		10.9	□□□□□ -0.66
SFI1-222	ENST00000478887	NR3C2	P08235	984 aa		10.9	□□□□□ -0.66
SFI1-222	ENST00000478887	EIF2AK2	P19525	551 aa	Known RBP	10.9	□□□□□ -0.66
SFI1-222	ENST00000478887	MNX1	P50219	401 aa	Predicted RBP	10.9	□□□□□ -0.66
SFI1-222	ENST00000478887	ADCY7	P51828	1080 aa		10.9	□□□□□ -0.66
SFI1-222	ENST00000478887	SSRP1	Q08945	709 aa	Known RBP	10.9	□□□□□ -0.66
SFI1-222	ENST00000478887	PGM5	Q15124	567 aa		10.9	□□□□□ -0.66
SFI1-222	ENST00000478887	UBE2S	Q16763	222 aa		10.9	□□□□□ -0.66
SFI1-222	ENST00000478887	CCDC144B	Q3MJ40	725 aa		10.9	□□□□□ -0.66
SFI1-222	ENST00000478887	FAM177A1	Q8N128	213 aa	Predicted RBP	10.9	□□□□□ -0.66
SFI1-222	ENST00000478887	NECAB1	Q8N987	351 aa		10.9	□□□□□ -0.66
SFI1-222	ENST00000478887	CCDC148	Q8NFR7	591 aa		10.9	□□□□□ -0.66
SFI1-222	ENST00000478887	IL31RA	Q8NI17	732 aa		10.9	□□□□□ -0.66
SFI1-222	ENST00000478887	CCDC12	Q8WUD4	166 aa	Predicted RBP	10.9	□□□□□ -0.66
SFI1-222	ENST00000478887	ZMYND12	Q9H0C1	365 aa		10.9	□□□□□ -0.66
SFI1-222	ENST00000478887	SH3GLB2	Q9NR46	395 aa		10.9	□□□□□ -0.66
SFI1-222	ENST00000478887	FRMPD3	Q5JV73	1810 aa		10.9	□□□□□ -0.66
SFI1-222	ENST00000478887	BAZ2B	Q9UIF8	2168 aa	Known RBP	10.9	□□□□□ -0.66
SFI1-222	ENST00000478887	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	10.89	□□□□□ -0.67
SFI1-222	ENST00000478887	SMCO2	A6NFE2	343 aa		10.89	□□□□□ -0.67
SFI1-222	ENST00000478887	ST18	O60284	1047 aa		10.89	□□□□□ -0.67
SFI1-222	ENST00000478887	DUSP11	O75319	330 aa	Known RBP	10.89	□□□□□ -0.67
SFI1-222	ENST00000478887	FARP2	O94887	1054 aa	Predicted RBP	10.89	□□□□□ -0.67
SFI1-222	ENST00000478887	TFRC	P02786	760 aa	Known RBP	10.89	□□□□□ -0.67
SFI1-222	ENST00000478887	RARB	P10826	455 aa		10.89	□□□□□ -0.67
SFI1-222	ENST00000478887	ADCYAP1R1	P41586	468 aa		10.89	□□□□□ -0.67
SFI1-222	ENST00000478887	CLK2	P49760	499 aa	Known RBP	10.89	□□□□□ -0.67
SFI1-222	ENST00000478887	STXBP2	Q15833	593 aa		10.89	□□□□□ -0.67
SFI1-222	ENST00000478887	ANO1	Q5XXA6	986 aa		10.89	□□□□□ -0.67
SFI1-222	ENST00000478887	EEPD1	Q7L9B9	569 aa		10.89	□□□□□ -0.67
SFI1-222	ENST00000478887	VSIG10L	Q86VR7	867 aa		10.89	□□□□□ -0.67
SFI1-222	ENST00000478887	FCHSD1	Q86WN1	690 aa		10.89	□□□□□ -0.67
SFI1-222	ENST00000478887	NSUN7	Q8NE18	718 aa	Known RBP	10.89	□□□□□ -0.67
SFI1-222	ENST00000478887	LENG1	Q96BZ8	264 aa	Predicted RBP	10.89	□□□□□ -0.67
SFI1-222	ENST00000478887	ZSCAN31	Q96LW9	406 aa	Predicted RBP	10.89	□□□□□ -0.67
SFI1-222	ENST00000478887	UPF3A	Q9H1J1	476 aa	Known RBP	10.89	□□□□□ -0.67
SFI1-222	ENST00000478887	XPNPEP3	Q9NQH7	507 aa		10.89	□□□□□ -0.67
SFI1-222	ENST00000478887	PDGFC	Q9NRA1	345 aa		10.89	□□□□□ -0.67
SFI1-222	ENST00000478887	SH2B1	Q9NRF2	756 aa	Predicted RBP	10.89	□□□□□ -0.67
SFI1-222	ENST00000478887	GNE	Q9Y223	722 aa	Known RBP	10.89	□□□□□ -0.67
SFI1-222	ENST00000478887	SYNRG	Q9UMZ2	1314 aa		10.88	□□□□□ -0.67
SFI1-222	ENST00000478887	SPDYE3	A6NKU9	549 aa		10.88	□□□□□ -0.67
SFI1-222	ENST00000478887	DNM1L	O00429	736 aa		10.88	□□□□□ -0.67
SFI1-222	ENST00000478887	ADAMTS4	O75173	837 aa		10.88	□□□□□ -0.67
SFI1-222	ENST00000478887	EIF3J	O75822	258 aa	Known RBP	10.88	□□□□□ -0.67
SFI1-222	ENST00000478887	STAM2	O75886	525 aa		10.88	□□□□□ -0.67
SFI1-222	ENST00000478887	CD2BP2	O95400	341 aa	Known RBP	10.88	□□□□□ -0.67
SFI1-222	ENST00000478887	FDPS	P14324	419 aa	Known RBP	10.88	□□□□□ -0.67
SFI1-222	ENST00000478887	SMPD1	P17405	629 aa		10.88	□□□□□ -0.67
SFI1-222	ENST00000478887	CST5	P28325	142 aa	Predicted RBP	10.88	□□□□□ -0.67
SFI1-222	ENST00000478887	GNA11	P29992	359 aa		10.88	□□□□□ -0.67
SFI1-222	ENST00000478887	CCND2	P30279	289 aa		10.88	□□□□□ -0.67
SFI1-222	ENST00000478887	NKX3-2	P78367	333 aa		10.88	□□□□□ -0.67
SFI1-222	ENST00000478887	TNFAIP2	Q03169	654 aa		10.88	□□□□□ -0.67
SFI1-222	ENST00000478887	AP3B2	Q13367	1082 aa		10.88	□□□□□ -0.67
SFI1-222	ENST00000478887	DUSP28	Q4G0W2	176 aa		10.88	□□□□□ -0.67
SFI1-222	ENST00000478887	IQSEC1	Q6DN90	963 aa		10.88	□□□□□ -0.67
SFI1-222	ENST00000478887	XRRA1	Q6P2D8	792 aa		10.88	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms