RNA–Protein interactions for RNA: ENST00000478776.1

VLDLR-204, Transcript of very low density lipoprotein receptor, humanhuman

TSL 3

Gene VLDLR, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-204ENST00000478776 SPATA6Q9NWH7 488 aaPredicted RBP5.58□□□□□ -1.52
VLDLR-204ENST00000478776 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.58□□□□□ -1.52
VLDLR-204ENST00000478776 PCDHGB7Q9Y5F8 929 aa5.58□□□□□ -1.52
VLDLR-204ENST00000478776 ZNF536O15090 1300 aa5.57□□□□□ -1.52
VLDLR-204ENST00000478776 LTBP3Q9NS15 1303 aa5.57□□□□□ -1.52
VLDLR-204ENST00000478776 FUCA1P04066 466 aa5.57□□□□□ -1.52
VLDLR-204ENST00000478776 RBM25P49756 843 aaKnown RBP5.57□□□□□ -1.52
VLDLR-204ENST00000478776 ZXDAP98168 799 aa5.57□□□□□ -1.52
VLDLR-204ENST00000478776 COL9A2Q14055 689 aaPredicted RBP5.57□□□□□ -1.52
VLDLR-204ENST00000478776 RGL3Q3MIN7 710 aa5.57□□□□□ -1.52
VLDLR-204ENST00000478776 CPZQ66K79 652 aa5.57□□□□□ -1.52
VLDLR-204ENST00000478776 BORAQ6PGQ7 559 aa5.57□□□□□ -1.52
VLDLR-204ENST00000478776 CCDC81Q6ZN84 652 aa5.57□□□□□ -1.52
VLDLR-204ENST00000478776 MTA3Q9BTC8 594 aa5.57□□□□□ -1.52
VLDLR-204ENST00000478776 KLHL25Q9H0H3 589 aa5.57□□□□□ -1.52
VLDLR-204ENST00000478776 AP5M1Q9H0R1 490 aa5.57□□□□□ -1.52
VLDLR-204ENST00000478776 NTRK1P04629 796 aa5.56□□□□□ -1.52
VLDLR-204ENST00000478776 EPHX1P07099 455 aa5.56□□□□□ -1.52
VLDLR-204ENST00000478776 EIF6P56537 245 aaKnown RBP5.56□□□□□ -1.52
VLDLR-204ENST00000478776 ETV3LQ6ZN32 361 aa5.56□□□□□ -1.52
VLDLR-204ENST00000478776 DCP2Q8IU60 420 aaKnown RBP5.56□□□□□ -1.52
VLDLR-204ENST00000478776 LGI4Q8N135 537 aa5.56□□□□□ -1.52
VLDLR-204ENST00000478776 LINC00482Q8N8I6 264 aa5.56□□□□□ -1.52
VLDLR-204ENST00000478776 SAMD11Q96NU1 681 aa5.56□□□□□ -1.52
VLDLR-204ENST00000478776 METTL5Q9NRN9 209 aaKnown RBP5.56□□□□□ -1.52
VLDLR-204ENST00000478776 FBLN5Q9UBX5 448 aa5.56□□□□□ -1.52
VLDLR-204ENST00000478776 CGGBP1Q9UFW8 167 aaPredicted RBP5.56□□□□□ -1.52
VLDLR-204ENST00000478776 SRRDQ9UH36 339 aa5.56□□□□□ -1.52
VLDLR-204ENST00000478776 PCDHB10Q9UN67 800 aa5.56□□□□□ -1.52
VLDLR-204ENST00000478776 C7orf72A4D263 438 aa5.55□□□□□ -1.52
VLDLR-204ENST00000478776 PPP1R11O60927 126 aaPredicted RBP5.55□□□□□ -1.52
VLDLR-204ENST00000478776 RECKO95980 971 aa5.55□□□□□ -1.52
VLDLR-204ENST00000478776 PLATP00750 562 aa5.55□□□□□ -1.52
VLDLR-204ENST00000478776 VAMP1P23763 118 aa5.55□□□□□ -1.52
VLDLR-204ENST00000478776 RPL13P26373 211 aaKnown RBP5.55□□□□□ -1.52
VLDLR-204ENST00000478776 GRB10Q13322 594 aa5.55□□□□□ -1.52
VLDLR-204ENST00000478776 GLB1LQ6UWU2 654 aa5.55□□□□□ -1.52
VLDLR-204ENST00000478776 CD300LDQ6UXZ3 194 aa5.55□□□□□ -1.52
VLDLR-204ENST00000478776 ZC3H18Q86VM9 953 aaKnown RBP5.55□□□□□ -1.52
VLDLR-204ENST00000478776 TTC9BQ8N6N2 239 aa5.55□□□□□ -1.52
VLDLR-204ENST00000478776 SPATA32Q96LK8 384 aa5.55□□□□□ -1.52
VLDLR-204ENST00000478776 C8orf49Q96NF6 230 aa5.55□□□□□ -1.52
VLDLR-204ENST00000478776 RBM15Q96T37 977 aaKnown RBP eCLIP5.55□□□□□ -1.52
VLDLR-204ENST00000478776 GORASP1Q9BQQ3 440 aa5.55□□□□□ -1.52
VLDLR-204ENST00000478776 C11orf84Q9BUA3 381 aaPredicted RBP5.55□□□□□ -1.52
VLDLR-204ENST00000478776 SIT1Q9Y3P8 196 aa5.55□□□□□ -1.52
VLDLR-204ENST00000478776 FSHBP01225 129 aa5.54□□□□□ -1.52
VLDLR-204ENST00000478776 C8BP07358 591 aa5.54□□□□□ -1.52
VLDLR-204ENST00000478776 TNFRSF1AP19438 455 aa5.54□□□□□ -1.52
VLDLR-204ENST00000478776 PPP2R5EQ16537 467 aa5.54□□□□□ -1.52
VLDLR-204ENST00000478776 TBC1D10BQ4KMP7 808 aaPredicted RBP5.54□□□□□ -1.52
VLDLR-204ENST00000478776 ARHGEF39Q8N4T4 335 aa5.54□□□□□ -1.52
VLDLR-204ENST00000478776 CRACR2BQ8N4Y2 399 aaPredicted RBP5.54□□□□□ -1.52
VLDLR-204ENST00000478776 TTLL6Q8N841 843 aa5.54□□□□□ -1.52
VLDLR-204ENST00000478776 KYQ8NBH2 561 aa5.54□□□□□ -1.52
VLDLR-204ENST00000478776 OR6P1Q8NGX9 317 aa5.54□□□□□ -1.52
VLDLR-204ENST00000478776 RCC1LQ96I51 464 aaKnown RBP5.54□□□□□ -1.52
VLDLR-204ENST00000478776 BTG4Q9NY30 223 aa5.54□□□□□ -1.52
VLDLR-204ENST00000478776 MARCH2Q9P0N8 246 aa5.54□□□□□ -1.52
VLDLR-204ENST00000478776 CLEC1BQ9P126 229 aa5.54□□□□□ -1.52
VLDLR-204ENST00000478776 AKT3Q9Y243 479 aa5.54□□□□□ -1.52
VLDLR-204ENST00000478776 INVSQ9Y283 1065 aa5.54□□□□□ -1.52
VLDLR-204ENST00000478776 MROH6A6NGR9 719 aa5.53□□□□□ -1.52
VLDLR-204ENST00000478776 AKAP8O43823 692 aaKnown RBP5.53□□□□□ -1.52
VLDLR-204ENST00000478776 ZNF20P17024 532 aa5.53□□□□□ -1.52
VLDLR-204ENST00000478776 THBS2P35442 1172 aa5.53□□□□□ -1.52
VLDLR-204ENST00000478776 FANCCQ00597 558 aa5.53□□□□□ -1.52
VLDLR-204ENST00000478776 FAM26FQ5R3K3 315 aa5.53□□□□□ -1.52
VLDLR-204ENST00000478776 MCTP2Q6DN12 878 aa5.53□□□□□ -1.52
VLDLR-204ENST00000478776 YIPF4Q9BSR8 244 aa5.53□□□□□ -1.52
VLDLR-204ENST00000478776 GINM1Q9NU53 330 aa5.53□□□□□ -1.52
VLDLR-204ENST00000478776 EFR3BQ9Y2G0 817 aa5.53□□□□□ -1.52
VLDLR-204ENST00000478776 A0A1W2PQH9 124 aa5.52□□□□□ -1.53
VLDLR-204ENST00000478776 NOP56O00567 594 aaKnown RBP5.52□□□□□ -1.53
VLDLR-204ENST00000478776 MATN3O15232 486 aa5.52□□□□□ -1.53
VLDLR-204ENST00000478776 POMZP3Q6PJE2 187 aa5.52□□□□□ -1.53
VLDLR-204ENST00000478776 ZNF654Q8IZM8 581 aa5.52□□□□□ -1.53
VLDLR-204ENST00000478776 C19orf47Q8N9M1 422 aaKnown RBP5.52□□□□□ -1.53
VLDLR-204ENST00000478776 SEC14L1Q92503 715 aa5.52□□□□□ -1.53
VLDLR-204ENST00000478776 LCORQ96JN0 433 aaPredicted RBP5.52□□□□□ -1.53
VLDLR-204ENST00000478776 DDX41Q9UJV9 622 aaKnown RBP5.52□□□□□ -1.53
VLDLR-204ENST00000478776 ANKRD34BA5PLL1 514 aa5.51□□□□□ -1.53
VLDLR-204ENST00000478776 C22orf46C9J442 243 aa5.51□□□□□ -1.53
VLDLR-204ENST00000478776 C1QTNF3-AMACRE9PGA6 284 aa5.51□□□□□ -1.53
VLDLR-204ENST00000478776 DDX3XO00571 662 aaKnown RBP eCLIP5.51□□□□□ -1.53
VLDLR-204ENST00000478776 KCNH1O95259 989 aa5.51□□□□□ -1.53
VLDLR-204ENST00000478776 NAT2P11245 290 aa5.51□□□□□ -1.53
VLDLR-204ENST00000478776 PLS3P13797 630 aa5.51□□□□□ -1.53
VLDLR-204ENST00000478776 RACK1P63244 317 aaKnown RBP5.51□□□□□ -1.53
VLDLR-204ENST00000478776 SCRN1Q12765 414 aa5.51□□□□□ -1.53
VLDLR-204ENST00000478776 PAK2Q13177 524 aa5.51□□□□□ -1.53
VLDLR-204ENST00000478776 SURF1Q15526 300 aa5.51□□□□□ -1.53
VLDLR-204ENST00000478776 C9orf131Q5VYM1 1079 aa5.51□□□□□ -1.53
VLDLR-204ENST00000478776 KIAA1211LQ6NV74 962 aa5.51□□□□□ -1.53
VLDLR-204ENST00000478776 MILR1Q7Z6M3 343 aa5.51□□□□□ -1.53
VLDLR-204ENST00000478776 STK32CQ86UX6 486 aa5.51□□□□□ -1.53
VLDLR-204ENST00000478776 TXNDC5Q8NBS9 432 aaKnown RBP5.51□□□□□ -1.53
VLDLR-204ENST00000478776 PLEKHO2Q8TD55 490 aa5.51□□□□□ -1.53
VLDLR-204ENST00000478776 CPLX3Q8WVH0 158 aa5.51□□□□□ -1.53
VLDLR-204ENST00000478776 DVL3Q92997 716 aaPredicted RBP5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms