RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 GCOM1H8Y6P7 765 aaPredicted RBP30.84■■■□□ 2.53
CCM2-211ENST00000478582 SEPT4O43236 478 aa30.84■■■□□ 2.53
CCM2-211ENST00000478582 POLR2MP0CAP2 368 aa30.84■■■□□ 2.53
CCM2-211ENST00000478582 NECAB1Q8N987 351 aa30.84■■■□□ 2.53
CCM2-211ENST00000478582 MORC4Q8TE76 937 aa30.84■■■□□ 2.53
CCM2-211ENST00000478582 FRMPD3Q5JV73 1810 aa30.84■■■□□ 2.53
CCM2-211ENST00000478582 STXBP3O00186 592 aa30.83■■■□□ 2.53
CCM2-211ENST00000478582 PIK3CDO00329 1044 aa30.83■■■□□ 2.53
CCM2-211ENST00000478582 SH2B1Q9NRF2 756 aaPredicted RBP30.83■■■□□ 2.53
CCM2-211ENST00000478582 COL20A1Q9P218 1284 aa30.83■■■□□ 2.53
CCM2-211ENST00000478582 LCTP09848 1927 aa30.83■■■□□ 2.53
CCM2-211ENST00000478582 EVI5O60447 810 aa30.82■■■□□ 2.52
CCM2-211ENST00000478582 DEXIO95424 95 aa30.82■■■□□ 2.52
CCM2-211ENST00000478582 CTDNEP1O95476 244 aa30.82■■■□□ 2.52
CCM2-211ENST00000478582 SNAI1O95863 264 aaPredicted RBP30.82■■■□□ 2.52
CCM2-211ENST00000478582 MCM2P49736 904 aa30.82■■■□□ 2.52
CCM2-211ENST00000478582 ALDH5A1P51649 535 aaPredicted RBP30.82■■■□□ 2.52
CCM2-211ENST00000478582 TYW1BQ6NUM6 668 aa30.82■■■□□ 2.52
CCM2-211ENST00000478582 PSTPIP2Q9H939 334 aa30.82■■■□□ 2.52
CCM2-211ENST00000478582 STK36Q9NRP7 1315 aa30.81■■■□□ 2.52
CCM2-211ENST00000478582 COL6A1P12109 1028 aa30.81■■■□□ 2.52
CCM2-211ENST00000478582 NAPAP54920 295 aa30.81■■■□□ 2.52
CCM2-211ENST00000478582 ARMCX2Q7L311 632 aa30.81■■■□□ 2.52
CCM2-211ENST00000478582 TAAR1Q96RJ0 339 aa30.81■■■□□ 2.52
CCM2-211ENST00000478582 MEIS2O14770 477 aa30.8■■■□□ 2.52
CCM2-211ENST00000478582 PPFIA3O75145 1194 aa30.8■■■□□ 2.52
CCM2-211ENST00000478582 ST3GAL1Q11201 340 aa30.8■■■□□ 2.52
CCM2-211ENST00000478582 NSUN6Q8TEA1 469 aaKnown RBP30.8■■■□□ 2.52
CCM2-211ENST00000478582 CUL5Q93034 780 aa30.8■■■□□ 2.52
CCM2-211ENST00000478582 CDKN2AIPQ9NXV6 580 aaPredicted RBP30.8■■■□□ 2.52
CCM2-211ENST00000478582 EDNRBP24530 442 aa30.79■■■□□ 2.52
CCM2-211ENST00000478582 HOXA13P31271 388 aaPredicted RBP30.79■■■□□ 2.52
CCM2-211ENST00000478582 CCDC12Q8WUD4 166 aaPredicted RBP30.79■■■□□ 2.52
CCM2-211ENST00000478582 MPHOSPH6Q99547 160 aaKnown RBP30.79■■■□□ 2.52
CCM2-211ENST00000478582 GLT8D2Q9H1C3 349 aa30.79■■■□□ 2.52
CCM2-211ENST00000478582 ABHD16BQ9H3Z7 469 aa30.79■■■□□ 2.52
CCM2-211ENST00000478582 RIC8AQ9NPQ8 531 aa30.79■■■□□ 2.52
CCM2-211ENST00000478582 SH3GLB2Q9NR46 395 aa30.79■■■□□ 2.52
CCM2-211ENST00000478582 CNPY2Q9Y2B0 182 aa30.79■■■□□ 2.52
CCM2-211ENST00000478582 ESYT2A0FGR8 921 aa30.78■■■□□ 2.52
CCM2-211ENST00000478582 B4DLN1 442 aa30.78■■■□□ 2.52
CCM2-211ENST00000478582 CD2BP2O95400 341 aaKnown RBP30.78■■■□□ 2.52
CCM2-211ENST00000478582 MRPL12P52815 198 aaKnown RBP30.78■■■□□ 2.52
CCM2-211ENST00000478582 ANO1Q5XXA6 986 aa30.78■■■□□ 2.52
CCM2-211ENST00000478582 ARRDC4Q8NCT1 418 aa30.78■■■□□ 2.52
CCM2-211ENST00000478582 IWS1Q96ST2 819 aa30.78■■■□□ 2.52
CCM2-211ENST00000478582 RMDN3Q96TC7 470 aa30.78■■■□□ 2.52
CCM2-211ENST00000478582 ALPK3Q96L96 1907 aa30.78■■■□□ 2.52
CCM2-211ENST00000478582 SMCO2A6NFE2 343 aa30.77■■■□□ 2.52
CCM2-211ENST00000478582 ZNF865P0CJ78 1059 aaPredicted RBP30.77■■■□□ 2.52
CCM2-211ENST00000478582 USP17L6PQ6QN14 398 aa30.77■■■□□ 2.52
CCM2-211ENST00000478582 FAM177A1Q8N128 213 aaPredicted RBP30.77■■■□□ 2.52
CCM2-211ENST00000478582 NSUN7Q8NE18 718 aaKnown RBP30.77■■■□□ 2.52
CCM2-211ENST00000478582 SMARCC2Q8TAQ2 1214 aa30.77■■■□□ 2.52
CCM2-211ENST00000478582 KATNBL1Q9H079 304 aa30.77■■■□□ 2.52
CCM2-211ENST00000478582 ZMYND12Q9H0C1 365 aa30.77■■■□□ 2.52
CCM2-211ENST00000478582 DNM1LO00429 736 aa30.76■■■□□ 2.51
CCM2-211ENST00000478582 LLPHQ9BRT6 129 aaKnown RBP30.76■■■□□ 2.51
CCM2-211ENST00000478582 PXMP2Q9NR77 195 aa30.76■■■□□ 2.51
CCM2-211ENST00000478582 ADCY7P51828 1080 aa30.75■■■□□ 2.51
CCM2-211ENST00000478582 ACVR2BQ13705 512 aa30.75■■■□□ 2.51
CCM2-211ENST00000478582 ARHGEF16Q5VV41 709 aa30.75■■■□□ 2.51
CCM2-211ENST00000478582 FCHSD1Q86WN1 690 aa30.75■■■□□ 2.51
CCM2-211ENST00000478582 CCDC83Q8IWF9 413 aa30.75■■■□□ 2.51
CCM2-211ENST00000478582 CCDC148Q8NFR7 591 aa30.75■■■□□ 2.51
CCM2-211ENST00000478582 CEP290O15078 2479 aa30.74■■■□□ 2.51
CCM2-211ENST00000478582 FDPSP14324 419 aaKnown RBP30.74■■■□□ 2.51
CCM2-211ENST00000478582 ORC3Q9UBD5 711 aaPredicted RBP30.74■■■□□ 2.51
CCM2-211ENST00000478582 FRMPD4Q14CM0 1322 aa30.73■■■□□ 2.51
CCM2-211ENST00000478582 PDE4DQ08499 809 aa30.73■■■□□ 2.51
CCM2-211ENST00000478582 GJC2Q5T442 439 aaPredicted RBP30.73■■■□□ 2.51
CCM2-211ENST00000478582 WASF1Q92558 559 aa30.73■■■□□ 2.51
CCM2-211ENST00000478582 TMX3Q96JJ7 454 aa30.73■■■□□ 2.51
CCM2-211ENST00000478582 PDCD2LQ9BRP1 358 aa30.73■■■□□ 2.51
CCM2-211ENST00000478582 C6orf50Q9HD87 102 aa30.73■■■□□ 2.51
CCM2-211ENST00000478582 VTA1Q9NP79 307 aa30.73■■■□□ 2.51
CCM2-211ENST00000478582 VPS54Q9P1Q0 977 aa30.73■■■□□ 2.51
CCM2-211ENST00000478582 DDX49Q9Y6V7 483 aaKnown RBP30.73■■■□□ 2.51
CCM2-211ENST00000478582 RARBP10826 455 aa30.72■■■□□ 2.51
CCM2-211ENST00000478582 AKR1A1P14550 325 aa30.72■■■□□ 2.51
CCM2-211ENST00000478582 GNA11P29992 359 aa30.72■■■□□ 2.51
CCM2-211ENST00000478582 SENP6Q9GZR1 1112 aaPredicted RBP30.72■■■□□ 2.51
CCM2-211ENST00000478582 COLQQ9Y215 455 aaPredicted RBP30.72■■■□□ 2.51
CCM2-211ENST00000478582 NR3C2P08235 984 aa30.71■■■□□ 2.51
CCM2-211ENST00000478582 EIF2AK2P19525 551 aaKnown RBP30.71■■■□□ 2.51
CCM2-211ENST00000478582 CLK2P49760 499 aaKnown RBP30.71■■■□□ 2.51
CCM2-211ENST00000478582 PGM5Q15124 567 aa30.71■■■□□ 2.51
CCM2-211ENST00000478582 UBE2SQ16763 222 aa30.71■■■□□ 2.51
CCM2-211ENST00000478582 C7orf61Q8IZ16 206 aa30.71■■■□□ 2.51
CCM2-211ENST00000478582 AIFM3Q96NN9 605 aa30.71■■■□□ 2.51
CCM2-211ENST00000478582 ZHX1Q9UKY1 873 aaPredicted RBP30.71■■■□□ 2.51
CCM2-211ENST00000478582 FAM184BQ9ULE4 1060 aa30.71■■■□□ 2.51
CCM2-211ENST00000478582 KBTBD13C9JR72 458 aa30.7■■■□□ 2.51
CCM2-211ENST00000478582 JAK2O60674 1132 aa30.7■■■□□ 2.51
CCM2-211ENST00000478582 FOSP01100 380 aaPredicted RBP30.7■■■□□ 2.51
CCM2-211ENST00000478582 LRRC41Q15345 812 aa30.7■■■□□ 2.51
CCM2-211ENST00000478582 STXBP2Q15833 593 aa30.7■■■□□ 2.51
CCM2-211ENST00000478582 HABP4Q5JVS0 413 aaKnown RBP30.7■■■□□ 2.51
CCM2-211ENST00000478582 VSIG10LQ86VR7 867 aa30.7■■■□□ 2.51
CCM2-211ENST00000478582 XPNPEP3Q9NQH7 507 aa30.7■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms