RNA–Protein interactions for RNA: ENST00000478359.5

TRAF3IP3-213, Transcript of TRAF3 interacting protein 3, humanhuman

TSL 1 (best)

Gene TRAF3IP3, Length 1,860 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP3-213ENST00000478359 HYIQ5T013 277 aa13.98□□□□□ -0.17
TRAF3IP3-213ENST00000478359 CEP135Q66GS9 1140 aa13.98□□□□□ -0.17
TRAF3IP3-213ENST00000478359 CIAPIN1Q6FI81 312 aa13.98□□□□□ -0.17
TRAF3IP3-213ENST00000478359 KCTD17Q8N5Z5 321 aa13.98□□□□□ -0.17
TRAF3IP3-213ENST00000478359 SNX29Q8TEQ0 813 aa13.98□□□□□ -0.17
TRAF3IP3-213ENST00000478359 PANX2Q96RD6 677 aa13.98□□□□□ -0.17
TRAF3IP3-213ENST00000478359 PDGFDQ9GZP0 370 aaPredicted RBP13.98□□□□□ -0.17
TRAF3IP3-213ENST00000478359 TAOK3Q9H2K8 898 aa13.98□□□□□ -0.17
TRAF3IP3-213ENST00000478359 GINM1Q9NU53 330 aa13.98□□□□□ -0.17
TRAF3IP3-213ENST00000478359 MYH7BA7E2Y1 1941 aa13.98□□□□□ -0.17
TRAF3IP3-213ENST00000478359 AKR1B15C9JRZ8 316 aaPredicted RBP13.97□□□□□ -0.17
TRAF3IP3-213ENST00000478359 PIK3CDO00329 1044 aa13.97□□□□□ -0.17
TRAF3IP3-213ENST00000478359 MAP3K10Q02779 954 aa13.97□□□□□ -0.17
TRAF3IP3-213ENST00000478359 HSP90AA4PQ58FG1 418 aa13.97□□□□□ -0.17
TRAF3IP3-213ENST00000478359 TCP11X2Q5H9J9 407 aa13.97□□□□□ -0.17
TRAF3IP3-213ENST00000478359 E4F1Q66K89 784 aaPredicted RBP13.97□□□□□ -0.17
TRAF3IP3-213ENST00000478359 FOXR2Q6PJQ5 311 aa13.97□□□□□ -0.17
TRAF3IP3-213ENST00000478359 UNC13DQ70J99 1090 aa13.97□□□□□ -0.17
TRAF3IP3-213ENST00000478359 FAM160B2Q86V87 743 aa13.97□□□□□ -0.17
TRAF3IP3-213ENST00000478359 CNGA4Q8IV77 575 aa13.97□□□□□ -0.17
TRAF3IP3-213ENST00000478359 ZBED3Q96IU2 234 aaPredicted RBP13.97□□□□□ -0.17
TRAF3IP3-213ENST00000478359 BAG1Q99933 345 aaPredicted RBP13.97□□□□□ -0.17
TRAF3IP3-213ENST00000478359 ZBTB21Q9ULJ3 1066 aa13.97□□□□□ -0.17
TRAF3IP3-213ENST00000478359 CNTNAP1P78357 1384 aa13.97□□□□□ -0.17
TRAF3IP3-213ENST00000478359 CLRN2A0PK11 232 aa13.97□□□□□ -0.17
TRAF3IP3-213ENST00000478359 KCNJ18B7U540 433 aa13.97□□□□□ -0.17
TRAF3IP3-213ENST00000478359 MEIS2O14770 477 aa13.97□□□□□ -0.17
TRAF3IP3-213ENST00000478359 EDIL3O43854 480 aa13.97□□□□□ -0.17
TRAF3IP3-213ENST00000478359 ASNSP08243 561 aa13.97□□□□□ -0.17
TRAF3IP3-213ENST00000478359 CCNE1P24864 410 aa13.97□□□□□ -0.17
TRAF3IP3-213ENST00000478359 PBX1P40424 430 aa13.97□□□□□ -0.17
TRAF3IP3-213ENST00000478359 GRB10Q13322 594 aa13.97□□□□□ -0.17
TRAF3IP3-213ENST00000478359 KCNJ12Q14500 433 aa13.97□□□□□ -0.17
TRAF3IP3-213ENST00000478359 Q4G0T1 1027 aa13.97□□□□□ -0.17
TRAF3IP3-213ENST00000478359 TMEM119Q4V9L6 283 aa13.97□□□□□ -0.17
TRAF3IP3-213ENST00000478359 HAUS3Q68CZ6 603 aa13.97□□□□□ -0.17
TRAF3IP3-213ENST00000478359 RAD54LQ92698 747 aa13.97□□□□□ -0.17
TRAF3IP3-213ENST00000478359 MTFR1LQ9H019 292 aa13.97□□□□□ -0.17
TRAF3IP3-213ENST00000478359 VEZTQ9HBM0 779 aa13.97□□□□□ -0.17
TRAF3IP3-213ENST00000478359 KCNMB3Q9NPA1 279 aa13.97□□□□□ -0.17
TRAF3IP3-213ENST00000478359 BMP2KQ9NSY1 1161 aaPredicted RBP13.97□□□□□ -0.17
TRAF3IP3-213ENST00000478359 MAGEC2Q9UBF1 373 aaPredicted RBP13.97□□□□□ -0.17
TRAF3IP3-213ENST00000478359 GDAQ9Y2T3 454 aa13.97□□□□□ -0.17
TRAF3IP3-213ENST00000478359 FER1L6Q2WGJ9 1857 aa13.96□□□□□ -0.17
TRAF3IP3-213ENST00000478359 USP17L15C9J2P7 530 aa13.96□□□□□ -0.17
TRAF3IP3-213ENST00000478359 USP17L13C9JLJ4 530 aa13.96□□□□□ -0.17
TRAF3IP3-213ENST00000478359 USP17L11C9JVI0 530 aa13.96□□□□□ -0.17
TRAF3IP3-213ENST00000478359 USP17L18D6R9N7 530 aa13.96□□□□□ -0.17
TRAF3IP3-213ENST00000478359 USP17L22D6RA61 530 aa13.96□□□□□ -0.17
TRAF3IP3-213ENST00000478359 USP17L17D6RBQ6 530 aa13.96□□□□□ -0.17
TRAF3IP3-213ENST00000478359 USP17L19D6RCP7 530 aa13.96□□□□□ -0.17
TRAF3IP3-213ENST00000478359 USP17L20D6RJB6 530 aa13.96□□□□□ -0.17
TRAF3IP3-213ENST00000478359 N4BP3O15049 544 aa13.96□□□□□ -0.17
TRAF3IP3-213ENST00000478359 SLURP2P0DP57 97 aa13.96□□□□□ -0.17
TRAF3IP3-213ENST00000478359 SREBF1P36956 1147 aa13.96□□□□□ -0.17
TRAF3IP3-213ENST00000478359 CXCL9Q07325 125 aa13.96□□□□□ -0.17
TRAF3IP3-213ENST00000478359 USP17L24Q0WX57 530 aa13.96□□□□□ -0.17
TRAF3IP3-213ENST00000478359 KRT31Q15323 416 aa13.96□□□□□ -0.17
TRAF3IP3-213ENST00000478359 USP17L6PQ6QN14 398 aa13.96□□□□□ -0.17
TRAF3IP3-213ENST00000478359 MTERF4Q7Z6M4 381 aaKnown RBP13.96□□□□□ -0.17
TRAF3IP3-213ENST00000478359 TC2NQ8N9U0 490 aa13.96□□□□□ -0.17
TRAF3IP3-213ENST00000478359 KIF18AQ8NI77 898 aa13.96□□□□□ -0.17
TRAF3IP3-213ENST00000478359 CRYGNQ8WXF5 182 aa13.96□□□□□ -0.17
TRAF3IP3-213ENST00000478359 HAS1Q92839 578 aa13.96□□□□□ -0.17
TRAF3IP3-213ENST00000478359 FAM20AQ96MK3 541 aa13.96□□□□□ -0.17
TRAF3IP3-213ENST00000478359 PLIN2Q99541 437 aa13.96□□□□□ -0.17
TRAF3IP3-213ENST00000478359 EHMT1Q9H9B1 1298 aa13.96□□□□□ -0.17
TRAF3IP3-213ENST00000478359 PRR12Q9ULL5 1215 aa13.96□□□□□ -0.17
TRAF3IP3-213ENST00000478359 COL4A5P29400 1685 aa13.96□□□□□ -0.17
TRAF3IP3-213ENST00000478359 A0A1W2PRG0 241 aa13.95□□□□□ -0.18
TRAF3IP3-213ENST00000478359 FGFR1OPO95684 399 aaKnown RBP13.95□□□□□ -0.18
TRAF3IP3-213ENST00000478359 CAP2P40123 477 aa13.95□□□□□ -0.18
TRAF3IP3-213ENST00000478359 COPB1P53618 953 aaKnown RBP13.95□□□□□ -0.18
TRAF3IP3-213ENST00000478359 ARHGAP4P98171 946 aa13.95□□□□□ -0.18
TRAF3IP3-213ENST00000478359 ERMNQ8TAM6 284 aa13.95□□□□□ -0.18
TRAF3IP3-213ENST00000478359 P2RX5Q93086 422 aa13.95□□□□□ -0.18
TRAF3IP3-213ENST00000478359 TRIM47Q96LD4 638 aa13.95□□□□□ -0.18
TRAF3IP3-213ENST00000478359 PNMA5Q96PV4 448 aa13.95□□□□□ -0.18
TRAF3IP3-213ENST00000478359 VCPKMTQ9H867 229 aa13.95□□□□□ -0.18
TRAF3IP3-213ENST00000478359 BLOC1S4Q9NUP1 217 aa13.95□□□□□ -0.18
TRAF3IP3-213ENST00000478359 ZBTB12Q9Y330 459 aaPredicted RBP13.95□□□□□ -0.18
TRAF3IP3-213ENST00000478359 POTEMA6NI47 508 aa13.95□□□□□ -0.18
TRAF3IP3-213ENST00000478359 CYP3A4P08684 503 aa13.95□□□□□ -0.18
TRAF3IP3-213ENST00000478359 CIITAP33076 1130 aa13.95□□□□□ -0.18
TRAF3IP3-213ENST00000478359 SHROOM1Q2M3G4 852 aaPredicted RBP13.95□□□□□ -0.18
TRAF3IP3-213ENST00000478359 PPP1R13BQ96KQ4 1090 aa13.95□□□□□ -0.18
TRAF3IP3-213ENST00000478359 MYOZ2Q9NPC6 264 aa13.95□□□□□ -0.18
TRAF3IP3-213ENST00000478359 BRCA1P38398 1863 aaKnown RBP13.95□□□□□ -0.18
TRAF3IP3-213ENST00000478359 A0A1W2PQC6 194 aa13.94□□□□□ -0.18
TRAF3IP3-213ENST00000478359 WNT10BO00744 389 aa13.94□□□□□ -0.18
TRAF3IP3-213ENST00000478359 KIF20AO95235 890 aa13.94□□□□□ -0.18
TRAF3IP3-213ENST00000478359 RRP1BQ14684 758 aaKnown RBP13.94□□□□□ -0.18
TRAF3IP3-213ENST00000478359 TTI2Q6NXR4 508 aa13.94□□□□□ -0.18
TRAF3IP3-213ENST00000478359 TMEM139Q8IV31 216 aa13.94□□□□□ -0.18
TRAF3IP3-213ENST00000478359 IQCDQ96DY2 449 aa13.94□□□□□ -0.18
TRAF3IP3-213ENST00000478359 TRMT1Q9NXH9 659 aaKnown RBP13.94□□□□□ -0.18
TRAF3IP3-213ENST00000478359 FEM1BQ9UK73 627 aa13.94□□□□□ -0.18
TRAF3IP3-213ENST00000478359 RABGAP1Q9Y3P9 1069 aa13.94□□□□□ -0.18
TRAF3IP3-213ENST00000478359 LTBP3Q9NS15 1303 aa13.94□□□□□ -0.18
TRAF3IP3-213ENST00000478359 USP27XA6NNY8 438 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms