RNA–Protein interactions for RNA: ENST00000478245.1

TCTN3-205, Transcript of tectonic family member 3, humanhuman

TSL 2

Gene TCTN3, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCTN3-205ENST00000478245 FAM160B2Q86V87 743 aa11.21□□□□□ -0.61
TCTN3-205ENST00000478245 RNF135Q8IUD6 432 aa11.21□□□□□ -0.61
TCTN3-205ENST00000478245 ZNF444Q8N0Y2 327 aaPredicted RBP11.21□□□□□ -0.61
TCTN3-205ENST00000478245 MIER1Q8N108 512 aa11.21□□□□□ -0.61
TCTN3-205ENST00000478245 LRRC47Q8N1G4 583 aaKnown RBP11.21□□□□□ -0.61
TCTN3-205ENST00000478245 TMEM57Q8N5G2 664 aa11.21□□□□□ -0.61
TCTN3-205ENST00000478245 GMCL1P1Q8NEA9 526 aa11.21□□□□□ -0.61
TCTN3-205ENST00000478245 EDAQ92838 391 aa11.21□□□□□ -0.61
TCTN3-205ENST00000478245 CHMP4CQ96CF2 233 aa11.21□□□□□ -0.61
TCTN3-205ENST00000478245 PURBQ96QR8 312 aaKnown RBP11.21□□□□□ -0.61
TCTN3-205ENST00000478245 IL1RAPL2Q9NP60 686 aa11.21□□□□□ -0.61
TCTN3-205ENST00000478245 ADD3Q9UEY8 706 aaKnown RBP11.21□□□□□ -0.61
TCTN3-205ENST00000478245 EXOC6BQ9Y2D4 811 aa11.21□□□□□ -0.61
TCTN3-205ENST00000478245 CACNA1BQ00975 2339 aa11.21□□□□□ -0.62
TCTN3-205ENST00000478245 KMT2EQ8IZD2 1858 aa11.21□□□□□ -0.62
TCTN3-205ENST00000478245 ZBED9Q6R2W3 1325 aa11.2□□□□□ -0.62
TCTN3-205ENST00000478245 TMEM221A6NGB7 291 aa11.2□□□□□ -0.62
TCTN3-205ENST00000478245 MINDY4BA8MYZ0 360 aa11.2□□□□□ -0.62
TCTN3-205ENST00000478245 CCER2I3L3R5 266 aa11.2□□□□□ -0.62
TCTN3-205ENST00000478245 M0R296 226 aa11.2□□□□□ -0.62
TCTN3-205ENST00000478245 TTLL1O95922 423 aa11.2□□□□□ -0.62
TCTN3-205ENST00000478245 GPM6BQ13491 265 aa11.2□□□□□ -0.62
TCTN3-205ENST00000478245 PPP2R5BQ15173 497 aa11.2□□□□□ -0.62
TCTN3-205ENST00000478245 CLUL1Q15846 466 aa11.2□□□□□ -0.62
TCTN3-205ENST00000478245 EPC2Q52LR7 807 aa11.2□□□□□ -0.62
TCTN3-205ENST00000478245 BMP8AQ7Z5Y6 402 aa11.2□□□□□ -0.62
TCTN3-205ENST00000478245 MORC4Q8TE76 937 aa11.2□□□□□ -0.62
TCTN3-205ENST00000478245 MKL1Q969V6 931 aa11.2□□□□□ -0.62
TCTN3-205ENST00000478245 CEP95Q96GE4 821 aa11.2□□□□□ -0.62
TCTN3-205ENST00000478245 SAMD11Q96NU1 681 aa11.2□□□□□ -0.62
TCTN3-205ENST00000478245 NSUN3Q9H649 340 aaKnown RBP11.2□□□□□ -0.62
TCTN3-205ENST00000478245 FAM86C1Q9NVL1 165 aa11.2□□□□□ -0.62
TCTN3-205ENST00000478245 PAG1Q9NWQ8 432 aa11.2□□□□□ -0.62
TCTN3-205ENST00000478245 SYNPO2Q9UMS6 1093 aa11.2□□□□□ -0.62
TCTN3-205ENST00000478245 MYH7BA7E2Y1 1941 aa11.19□□□□□ -0.62
TCTN3-205ENST00000478245 ATG2AQ2TAZ0 1938 aa11.19□□□□□ -0.62
TCTN3-205ENST00000478245 RALGAPA2Q2PPJ7 1873 aa11.19□□□□□ -0.62
TCTN3-205ENST00000478245 A6NJR5 290 aa11.19□□□□□ -0.62
TCTN3-205ENST00000478245 NKRFO15226 690 aaKnown RBP eCLIP11.19□□□□□ -0.62
TCTN3-205ENST00000478245 NCK2O43639 380 aa11.19□□□□□ -0.62
TCTN3-205ENST00000478245 NBNO60934 754 aa11.19□□□□□ -0.62
TCTN3-205ENST00000478245 CXCL10P02778 98 aa11.19□□□□□ -0.62
TCTN3-205ENST00000478245 IFIT2P09913 472 aaKnown RBP11.19□□□□□ -0.62
TCTN3-205ENST00000478245 ALDH5A1P51649 535 aaPredicted RBP11.19□□□□□ -0.62
TCTN3-205ENST00000478245 SNAP25P60880 206 aa11.19□□□□□ -0.62
TCTN3-205ENST00000478245 TCF15Q12870 199 aa11.19□□□□□ -0.62
TCTN3-205ENST00000478245 GPNMBQ14956 572 aa11.19□□□□□ -0.62
TCTN3-205ENST00000478245 SMAD2Q15796 467 aaKnown RBP11.19□□□□□ -0.62
TCTN3-205ENST00000478245 DIEXFQ68CQ4 756 aaKnown RBP11.19□□□□□ -0.62
TCTN3-205ENST00000478245 TRIM67Q6ZTA4 783 aa11.19□□□□□ -0.62
TCTN3-205ENST00000478245 MYOCDQ8IZQ8 938 aa11.19□□□□□ -0.62
TCTN3-205ENST00000478245 STAG1Q8WVM7 1258 aa11.19□□□□□ -0.62
TCTN3-205ENST00000478245 ATOH1Q92858 354 aaPredicted RBP11.19□□□□□ -0.62
TCTN3-205ENST00000478245 IRF2BPLQ9H1B7 796 aa11.19□□□□□ -0.62
TCTN3-205ENST00000478245 ZNF287Q9HBT7 754 aa11.19□□□□□ -0.62
TCTN3-205ENST00000478245 MTMR4Q9NYA4 1195 aa11.19□□□□□ -0.62
TCTN3-205ENST00000478245 CCPG1Q9ULG6 757 aa11.19□□□□□ -0.62
TCTN3-205ENST00000478245 IGKV6D-41A0A0C4DH26 115 aa11.18□□□□□ -0.62
TCTN3-205ENST00000478245 RBM47A0AV96 593 aaKnown RBP11.18□□□□□ -0.62
TCTN3-205ENST00000478245 H3BNC9 293 aa11.18□□□□□ -0.62
TCTN3-205ENST00000478245 AMHP03971 560 aa11.18□□□□□ -0.62
TCTN3-205ENST00000478245 CKBP12277 381 aa11.18□□□□□ -0.62
TCTN3-205ENST00000478245 SLC1A4P43007 532 aa11.18□□□□□ -0.62
TCTN3-205ENST00000478245 PDE4BQ07343 736 aa11.18□□□□□ -0.62
TCTN3-205ENST00000478245 PDE4DQ08499 809 aa11.18□□□□□ -0.62
TCTN3-205ENST00000478245 BAATQ14032 418 aaPredicted RBP11.18□□□□□ -0.62
TCTN3-205ENST00000478245 TCTN1Q2MV58 587 aa11.18□□□□□ -0.62
TCTN3-205ENST00000478245 SBK1Q52WX2 424 aa11.18□□□□□ -0.62
TCTN3-205ENST00000478245 HSP90AB4PQ58FF6 505 aa11.18□□□□□ -0.62
TCTN3-205ENST00000478245 GDF6Q6KF10 455 aaPredicted RBP11.18□□□□□ -0.62
TCTN3-205ENST00000478245 RPAINQ86UA6 219 aa11.18□□□□□ -0.62
TCTN3-205ENST00000478245 CLASRPQ8N2M8 674 aaKnown RBP11.18□□□□□ -0.62
TCTN3-205ENST00000478245 FBXL6Q8N531 539 aa11.18□□□□□ -0.62
TCTN3-205ENST00000478245 SCFD2Q8WU76 684 aa11.18□□□□□ -0.62
TCTN3-205ENST00000478245 MPHOSPH6Q99547 160 aaKnown RBP11.18□□□□□ -0.62
TCTN3-205ENST00000478245 BOLA2Q9H3K6 86 aa11.18□□□□□ -0.62
TCTN3-205ENST00000478245 LOC102724159A0A0B4J2E5 919 aa11.17□□□□□ -0.62
TCTN3-205ENST00000478245 PTPDC1A2A3K4 754 aa11.17□□□□□ -0.62
TCTN3-205ENST00000478245 STXBP3O00186 592 aa11.17□□□□□ -0.62
TCTN3-205ENST00000478245 MBTPS2O43462 519 aa11.17□□□□□ -0.62
TCTN3-205ENST00000478245 PRDM1O75626 825 aa11.17□□□□□ -0.62
TCTN3-205ENST00000478245 TXNP10599 105 aaKnown RBP11.17□□□□□ -0.62
TCTN3-205ENST00000478245 MCCP23508 829 aa11.17□□□□□ -0.62
TCTN3-205ENST00000478245 COL19A1Q14993 1142 aa11.17□□□□□ -0.62
TCTN3-205ENST00000478245 PWP2Q15269 919 aaKnown RBP11.17□□□□□ -0.62
TCTN3-205ENST00000478245 UBE3CQ15386 1083 aa11.17□□□□□ -0.62
TCTN3-205ENST00000478245 ZKSCAN2Q63HK3 967 aa11.17□□□□□ -0.62
TCTN3-205ENST00000478245 ZSCAN25Q6NSZ9 544 aa11.17□□□□□ -0.62
TCTN3-205ENST00000478245 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.17□□□□□ -0.62
TCTN3-205ENST00000478245 RHPN1Q8TCX5 695 aa11.17□□□□□ -0.62
TCTN3-205ENST00000478245 DHX38Q92620 1227 aaKnown RBP11.17□□□□□ -0.62
TCTN3-205ENST00000478245 COPS5Q92905 334 aa11.17□□□□□ -0.62
TCTN3-205ENST00000478245 YME1L1Q96TA2 773 aa11.17□□□□□ -0.62
TCTN3-205ENST00000478245 PLXNA3P51805 1871 aa11.17□□□□□ -0.62
TCTN3-205ENST00000478245 GVINP1Q7Z2Y8 2422 aa11.16□□□□□ -0.62
TCTN3-205ENST00000478245 KIAA1217Q5T5P2 1943 aa11.16□□□□□ -0.62
TCTN3-205ENST00000478245 LGR5O75473 907 aa11.16□□□□□ -0.62
TCTN3-205ENST00000478245 CHGBP05060 677 aa11.16□□□□□ -0.62
TCTN3-205ENST00000478245 TSPY3P0CV98 308 aa11.16□□□□□ -0.62
TCTN3-205ENST00000478245 TSPY8P0CW00 308 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms