RNA–Protein interactions for RNA: ENST00000477988.1

NCKAP1-204, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 612 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-204ENST00000477988 DNERQ8NFT8 737 aa6.19□□□□□ -1.42
NCKAP1-204ENST00000477988 RNF34Q969K3 372 aa6.19□□□□□ -1.42
NCKAP1-204ENST00000477988 ZDHHC15Q96MV8 337 aa6.19□□□□□ -1.42
NCKAP1-204ENST00000477988 RXFP1Q9HBX9 757 aa6.19□□□□□ -1.42
NCKAP1-204ENST00000477988 PPP4R1LQ9P1A2 415 aa6.19□□□□□ -1.42
NCKAP1-204ENST00000477988 AURKAO14965 403 aa6.18□□□□□ -1.42
NCKAP1-204ENST00000477988 TP53P04637 393 aaPredicted RBP6.18□□□□□ -1.42
NCKAP1-204ENST00000477988 SMAD4Q13485 552 aaKnown RBP6.18□□□□□ -1.42
NCKAP1-204ENST00000477988 ZNF575Q86XF7 245 aa6.18□□□□□ -1.42
NCKAP1-204ENST00000477988 RBBP8NLQ8NC74 664 aaPredicted RBP6.18□□□□□ -1.42
NCKAP1-204ENST00000477988 MTA3Q9BTC8 594 aa6.18□□□□□ -1.42
NCKAP1-204ENST00000477988 SPON2Q9BUD6 331 aa6.18□□□□□ -1.42
NCKAP1-204ENST00000477988 C11orf21Q9P2W6 132 aa6.18□□□□□ -1.42
NCKAP1-204ENST00000477988 ZNF214Q9UL59 606 aaPredicted RBP6.18□□□□□ -1.42
NCKAP1-204ENST00000477988 RWDD3Q9Y3V2 267 aa6.18□□□□□ -1.42
NCKAP1-204ENST00000477988 TRBV23OR9-2A0A075B6M9 112 aa6.17□□□□□ -1.42
NCKAP1-204ENST00000477988 GUCY2CP25092 1073 aa6.17□□□□□ -1.42
NCKAP1-204ENST00000477988 THBS2P35442 1172 aa6.17□□□□□ -1.42
NCKAP1-204ENST00000477988 R3HDM1Q15032 1099 aaKnown RBP6.17□□□□□ -1.42
NCKAP1-204ENST00000477988 WWC2Q6AWC2 1192 aa6.17□□□□□ -1.42
NCKAP1-204ENST00000477988 UNC5AQ6ZN44 842 aa6.17□□□□□ -1.42
NCKAP1-204ENST00000477988 DDX11Q96FC9 970 aa6.17□□□□□ -1.42
NCKAP1-204ENST00000477988 C11orf84Q9BUA3 381 aaPredicted RBP6.17□□□□□ -1.42
NCKAP1-204ENST00000477988 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.17□□□□□ -1.422e-15■■■■■ 47.6
NCKAP1-204ENST00000477988 WHRNQ9P202 907 aa6.17□□□□□ -1.42
NCKAP1-204ENST00000477988 FBLN5Q9UBX5 448 aa6.17□□□□□ -1.42
NCKAP1-204ENST00000477988 LAMTOR5O43504 91 aa6.16□□□□□ -1.42
NCKAP1-204ENST00000477988 SURF1Q15526 300 aa6.16□□□□□ -1.42
NCKAP1-204ENST00000477988 TTLL6Q8N841 843 aa6.16□□□□□ -1.42
NCKAP1-204ENST00000477988 KYQ8NBH2 561 aa6.16□□□□□ -1.42
NCKAP1-204ENST00000477988 FERD3LQ96RJ6 166 aa6.16□□□□□ -1.42
NCKAP1-204ENST00000477988 GORASP1Q9BQQ3 440 aa6.16□□□□□ -1.42
NCKAP1-204ENST00000477988 CBFA2T2O43439 604 aa6.15□□□□□ -1.42
NCKAP1-204ENST00000477988 PPP1R11O60927 126 aaPredicted RBP6.15□□□□□ -1.42
NCKAP1-204ENST00000477988 C8BP07358 591 aa6.15□□□□□ -1.42
NCKAP1-204ENST00000477988 SEPHS1P49903 392 aa6.15□□□□□ -1.42
NCKAP1-204ENST00000477988 TGFB2P61812 414 aa6.15□□□□□ -1.42
NCKAP1-204ENST00000477988 PURAQ00577 322 aaKnown RBP6.15□□□□□ -1.42
NCKAP1-204ENST00000477988 MRPL58Q14197 206 aaKnown RBP6.15□□□□□ -1.42
NCKAP1-204ENST00000477988 PPP2R5DQ14738 602 aa6.15□□□□□ -1.42
NCKAP1-204ENST00000477988 ZYXQ15942 572 aaKnown RBP6.15□□□□□ -1.42
NCKAP1-204ENST00000477988 SMN1Q16637 294 aaKnown RBP6.15□□□□□ -1.42
NCKAP1-204ENST00000477988 C9orf131Q5VYM1 1079 aa6.15□□□□□ -1.42
NCKAP1-204ENST00000477988 USP33Q8TEY7 942 aa6.15□□□□□ -1.42
NCKAP1-204ENST00000477988 BCL11AQ9H165 835 aa6.15□□□□□ -1.42
NCKAP1-204ENST00000477988 GPR42O15529 346 aa6.14□□□□□ -1.43
NCKAP1-204ENST00000477988 PAMP19021 973 aa6.14□□□□□ -1.43
NCKAP1-204ENST00000477988 ETV3LQ6ZN32 361 aa6.14□□□□□ -1.43
NCKAP1-204ENST00000477988 PALM2Q8IXS6 379 aa6.14□□□□□ -1.43
NCKAP1-204ENST00000477988 TXNDC5Q8NBS9 432 aaKnown RBP6.14□□□□□ -1.43
NCKAP1-204ENST00000477988 MCMBPQ9BTE3 642 aa6.14□□□□□ -1.43
NCKAP1-204ENST00000477988 GULP1Q9UBP9 304 aa6.14□□□□□ -1.43
NCKAP1-204ENST00000477988 BACE2Q9Y5Z0 518 aa6.14□□□□□ -1.43
NCKAP1-204ENST00000477988 C2orf71A6NGG8 1288 aa6.13□□□□□ -1.43
NCKAP1-204ENST00000477988 C9orf118A6NHY6 69 aa6.13□□□□□ -1.43
NCKAP1-204ENST00000477988 NPHS1O60500 1241 aa6.13□□□□□ -1.43
NCKAP1-204ENST00000477988 B4GALT3O60512 393 aa6.13□□□□□ -1.43
NCKAP1-204ENST00000477988 PRR31Q5SQ13 230 aa6.13□□□□□ -1.43
NCKAP1-204ENST00000477988 MCTP2Q6DN12 878 aa6.13□□□□□ -1.43
NCKAP1-204ENST00000477988 ZNF585AQ6P3V2 769 aa6.13□□□□□ -1.43
NCKAP1-204ENST00000477988 MIB1Q86YT6 1006 aa6.13□□□□□ -1.43
NCKAP1-204ENST00000477988 DCP2Q8IU60 420 aaKnown RBP6.13□□□□□ -1.43
NCKAP1-204ENST00000477988 WWC2-AS2Q96NR7 200 aa6.13□□□□□ -1.43
NCKAP1-204ENST00000477988 HAUS7Q99871 368 aa6.13□□□□□ -1.43
NCKAP1-204ENST00000477988 GBP3Q9H0R5 595 aa6.13□□□□□ -1.43
NCKAP1-204ENST00000477988 FAM86C1Q9NVL1 165 aa6.13□□□□□ -1.43
NCKAP1-204ENST00000477988 SLC12A7Q9Y666 1083 aa6.13□□□□□ -1.43
NCKAP1-204ENST00000477988 NPHP3-ACAD11A0A0J9YXS1 232 aa6.12□□□□□ -1.43
NCKAP1-204ENST00000477988 STXBP3O00186 592 aa6.12□□□□□ -1.43
NCKAP1-204ENST00000477988 NTRK1P04629 796 aa6.12□□□□□ -1.43
NCKAP1-204ENST00000477988 HNRNPA0Q13151 305 aaKnown RBP6.12□□□□□ -1.43
NCKAP1-204ENST00000477988 GRB10Q13322 594 aa6.12□□□□□ -1.43
NCKAP1-204ENST00000477988 FHL2Q14192 279 aa6.12□□□□□ -1.43
NCKAP1-204ENST00000477988 PLEKHH3Q7Z736 793 aa6.12□□□□□ -1.43
NCKAP1-204ENST00000477988 ZC3H18Q86VM9 953 aaKnown RBP6.12□□□□□ -1.43
NCKAP1-204ENST00000477988 CPNE8Q86YQ8 564 aa6.12□□□□□ -1.43
NCKAP1-204ENST00000477988 LCORQ96JN0 433 aaPredicted RBP6.12□□□□□ -1.43
NCKAP1-204ENST00000477988 KLHL25Q9H0H3 589 aa6.12□□□□□ -1.43
NCKAP1-204ENST00000477988 NGRNQ9NPE2 291 aaKnown RBP6.12□□□□□ -1.43
NCKAP1-204ENST00000477988 TESMINQ9Y4I5 508 aa6.12□□□□□ -1.43
NCKAP1-204ENST00000477988 C7orf72A4D263 438 aa6.11□□□□□ -1.43
NCKAP1-204ENST00000477988 VAMP4O75379 141 aa6.11□□□□□ -1.43
NCKAP1-204ENST00000477988 PPM1BO75688 479 aa6.11□□□□□ -1.43
NCKAP1-204ENST00000477988 SELENOPP49908 381 aa6.11□□□□□ -1.43
NCKAP1-204ENST00000477988 INHBEP58166 350 aa6.11□□□□□ -1.43
NCKAP1-204ENST00000477988 AMPD2Q01433 879 aa6.11□□□□□ -1.43
NCKAP1-204ENST00000477988 ZNF326Q5BKZ1 582 aaKnown RBP6.11□□□□□ -1.43
NCKAP1-204ENST00000477988 SPDYAQ5MJ70 313 aa6.11□□□□□ -1.43
NCKAP1-204ENST00000477988 RCC1LQ96I51 464 aaKnown RBP6.11□□□□□ -1.43
NCKAP1-204ENST00000477988 SYT3Q9BQG1 590 aa6.11□□□□□ -1.43
NCKAP1-204ENST00000477988 AP5M1Q9H0R1 490 aa6.11□□□□□ -1.43
NCKAP1-204ENST00000477988 DEF6Q9H4E7 631 aa6.11□□□□□ -1.43
NCKAP1-204ENST00000477988 NPEPPSL1A6NEC2 478 aa6.1□□□□□ -1.43
NCKAP1-204ENST00000477988 FUCA1P04066 466 aa6.1□□□□□ -1.43
NCKAP1-204ENST00000477988 FBXW10Q5XX13 1052 aa6.1□□□□□ -1.43
NCKAP1-204ENST00000477988 HEATR6Q6AI08 1181 aaKnown RBP6.1□□□□□ -1.43
NCKAP1-204ENST00000477988 RUFY4Q6ZNE9 571 aa6.1□□□□□ -1.43
NCKAP1-204ENST00000477988 CIR1Q86X95 450 aaPredicted RBP6.1□□□□□ -1.43
NCKAP1-204ENST00000477988 ARHGEF39Q8N4T4 335 aa6.1□□□□□ -1.43
NCKAP1-204ENST00000477988 ADCY4Q8NFM4 1077 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms