RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 MRPL42Q9Y6G3 142 aaKnown RBP6.78□□□□□ -1.32
SMNDC1-205ENST00000477763 CADPSQ9ULU8 1353 aa6.78□□□□□ -1.32
SMNDC1-205ENST00000477763 ARNTLO00327 626 aa6.77□□□□□ -1.33
SMNDC1-205ENST00000477763 PRODHO43272 600 aa6.77□□□□□ -1.33
SMNDC1-205ENST00000477763 SEMA7AO75326 666 aa6.77□□□□□ -1.33
SMNDC1-205ENST00000477763 CLSTN1O94985 981 aa6.77□□□□□ -1.33
SMNDC1-205ENST00000477763 GLI4P10075 376 aa6.77□□□□□ -1.33
SMNDC1-205ENST00000477763 GTF2A2P52657 109 aa6.77□□□□□ -1.33
SMNDC1-205ENST00000477763 INF2Q27J81 1249 aa6.77□□□□□ -1.33
SMNDC1-205ENST00000477763 SDE2Q6IQ49 451 aa6.77□□□□□ -1.33
SMNDC1-205ENST00000477763 PAQR3Q6TCH7 311 aa6.77□□□□□ -1.33
SMNDC1-205ENST00000477763 RSPO2Q6UXX9 243 aaPredicted RBP6.77□□□□□ -1.33
SMNDC1-205ENST00000477763 NSMFQ6X4W1 530 aa6.77□□□□□ -1.33
SMNDC1-205ENST00000477763 ZNF605Q86T29 641 aa6.77□□□□□ -1.33
SMNDC1-205ENST00000477763 CABP7Q86V35 215 aa6.77□□□□□ -1.33
SMNDC1-205ENST00000477763 JMYQ8N9B5 988 aa6.77□□□□□ -1.33
SMNDC1-205ENST00000477763 SH3TC2Q8TF17 1288 aa6.77□□□□□ -1.33
SMNDC1-205ENST00000477763 RNPC3Q96LT9 517 aaKnown RBP6.77□□□□□ -1.33
SMNDC1-205ENST00000477763 PPP1R16BQ96T49 567 aa6.77□□□□□ -1.33
SMNDC1-205ENST00000477763 TMEFF2Q9UIK5 374 aaPredicted RBP6.77□□□□□ -1.33
SMNDC1-205ENST00000477763 TIMM13Q9Y5L4 95 aaPredicted RBP6.77□□□□□ -1.33
SMNDC1-205ENST00000477763 TEX51A0A1B0GUA7 166 aa6.76□□□□□ -1.33
SMNDC1-205ENST00000477763 MYO1BO43795 1136 aa6.76□□□□□ -1.33
SMNDC1-205ENST00000477763 DIAPH1O60610 1272 aaKnown RBP6.76□□□□□ -1.33
SMNDC1-205ENST00000477763 PPP1R11O60927 126 aaPredicted RBP6.76□□□□□ -1.33
SMNDC1-205ENST00000477763 DBHP09172 617 aa6.76□□□□□ -1.33
SMNDC1-205ENST00000477763 MAPKAPK2P49137 400 aa6.76□□□□□ -1.33
SMNDC1-205ENST00000477763 RPL11P62913 178 aaKnown RBP6.76□□□□□ -1.33
SMNDC1-205ENST00000477763 RAB3GAP1Q15042 981 aa6.76□□□□□ -1.33
SMNDC1-205ENST00000477763 ZNF648Q5T619 568 aaPredicted RBP6.76□□□□□ -1.33
SMNDC1-205ENST00000477763 BICRALQ6AI39 1079 aa6.76□□□□□ -1.33
SMNDC1-205ENST00000477763 JAZF1Q86VZ6 243 aa6.76□□□□□ -1.33
SMNDC1-205ENST00000477763 SCUBE1Q8IWY4 988 aa6.76□□□□□ -1.33
SMNDC1-205ENST00000477763 Q8N1Y9 231 aa6.76□□□□□ -1.33
SMNDC1-205ENST00000477763 NETO2Q8NC67 525 aa6.76□□□□□ -1.33
SMNDC1-205ENST00000477763 DPF3Q92784 378 aa6.76□□□□□ -1.33
SMNDC1-205ENST00000477763 IPO9Q96P70 1041 aaKnown RBP6.76□□□□□ -1.33
SMNDC1-205ENST00000477763 SLC38A3Q99624 504 aa6.76□□□□□ -1.33
SMNDC1-205ENST00000477763 GPR27Q9NS67 375 aa6.76□□□□□ -1.33
SMNDC1-205ENST00000477763 KLHL14Q9P2G3 628 aa6.76□□□□□ -1.33
SMNDC1-205ENST00000477763 GULP1Q9UBP9 304 aa6.76□□□□□ -1.33
SMNDC1-205ENST00000477763 RWDD3Q9Y3V2 267 aa6.76□□□□□ -1.33
SMNDC1-205ENST00000477763 MYOCOSA0A1B0GUC4 107 aa6.75□□□□□ -1.33
SMNDC1-205ENST00000477763 SDHBP21912 280 aa6.75□□□□□ -1.33
SMNDC1-205ENST00000477763 TACR1P25103 407 aa6.75□□□□□ -1.33
SMNDC1-205ENST00000477763 C2orf27AQ580R0 203 aa6.75□□□□□ -1.33
SMNDC1-205ENST00000477763 YOD1Q5VVQ6 348 aaPredicted RBP6.75□□□□□ -1.33
SMNDC1-205ENST00000477763 RPTNQ6XPR3 784 aa6.75□□□□□ -1.33
SMNDC1-205ENST00000477763 RCBTB1Q8NDN9 531 aa6.75□□□□□ -1.33
SMNDC1-205ENST00000477763 ZSWIM2Q8NEG5 633 aa6.75□□□□□ -1.33
SMNDC1-205ENST00000477763 PLEKHO2Q8TD55 490 aa6.75□□□□□ -1.33
SMNDC1-205ENST00000477763 DCAF4Q8WV16 495 aa6.75□□□□□ -1.33
SMNDC1-205ENST00000477763 ZFYVE21Q9BQ24 234 aa6.75□□□□□ -1.33
SMNDC1-205ENST00000477763 MCOLN1Q9GZU1 580 aa6.75□□□□□ -1.33
SMNDC1-205ENST00000477763 NUDT19A8MXV4 375 aa6.74□□□□□ -1.33
SMNDC1-205ENST00000477763 MED14OSP0DP75 135 aa6.74□□□□□ -1.33
SMNDC1-205ENST00000477763 GLDCP23378 1020 aa6.74□□□□□ -1.33
SMNDC1-205ENST00000477763 SYDE1Q6ZW31 735 aaPredicted RBP6.74□□□□□ -1.33
SMNDC1-205ENST00000477763 HOMER1Q86YM7 354 aa6.74□□□□□ -1.33
SMNDC1-205ENST00000477763 FAM177A1Q8N128 213 aaPredicted RBP6.74□□□□□ -1.33
SMNDC1-205ENST00000477763 CDC6Q99741 560 aa6.74□□□□□ -1.33
SMNDC1-205ENST00000477763 FBLN5Q9UBX5 448 aa6.74□□□□□ -1.33
SMNDC1-205ENST00000477763 TRBV23-1A0A0A0MS06 115 aa6.73□□□□□ -1.33
SMNDC1-205ENST00000477763 CCDC163A0A0D9SF12 145 aa6.73□□□□□ -1.33
SMNDC1-205ENST00000477763 TSPAN15O95858 294 aa6.73□□□□□ -1.33
SMNDC1-205ENST00000477763 FAM153BP0C7A2 387 aa6.73□□□□□ -1.33
SMNDC1-205ENST00000477763 HSD3B2P26439 372 aa6.73□□□□□ -1.33
SMNDC1-205ENST00000477763 VIPR1P32241 457 aa6.73□□□□□ -1.33
SMNDC1-205ENST00000477763 SUMO1P63165 101 aaKnown RBP6.73□□□□□ -1.33
SMNDC1-205ENST00000477763 SRSF3P84103 164 aaKnown RBP6.73□□□□□ -1.33
SMNDC1-205ENST00000477763 ZNF124Q15973 351 aa6.73□□□□□ -1.33
SMNDC1-205ENST00000477763 NTRK3Q16288 839 aa6.73□□□□□ -1.33
SMNDC1-205ENST00000477763 PLEKHN1Q494U1 663 aaPredicted RBP6.73□□□□□ -1.33
SMNDC1-205ENST00000477763 LCE4AQ5TA78 99 aa6.73□□□□□ -1.33
SMNDC1-205ENST00000477763 WWC2Q6AWC2 1192 aa6.73□□□□□ -1.33
SMNDC1-205ENST00000477763 USP53Q70EK8 1073 aa6.73□□□□□ -1.33
SMNDC1-205ENST00000477763 RIOX2Q8IUF8 465 aa6.73□□□□□ -1.33
SMNDC1-205ENST00000477763 NLGN1Q8N2Q7 840 aa6.73□□□□□ -1.33
SMNDC1-205ENST00000477763 USP33Q8TEY7 942 aa6.73□□□□□ -1.33
SMNDC1-205ENST00000477763 APPBP2Q92624 585 aa6.73□□□□□ -1.33
SMNDC1-205ENST00000477763 MARCH2Q9P0N8 246 aa6.73□□□□□ -1.33
SMNDC1-205ENST00000477763 NUDT5Q9UKK9 219 aa6.73□□□□□ -1.33
SMNDC1-205ENST00000477763 X6R8D5 127 aa6.73□□□□□ -1.33
SMNDC1-205ENST00000477763 H7BY64 318 aa6.72□□□□□ -1.33
SMNDC1-205ENST00000477763 ENPP3O14638 875 aa6.72□□□□□ -1.33
SMNDC1-205ENST00000477763 CDC45O75419 566 aa6.72□□□□□ -1.33
SMNDC1-205ENST00000477763 FUCA1P04066 466 aa6.72□□□□□ -1.33
SMNDC1-205ENST00000477763 TMEM253P0C7T8 217 aa6.72□□□□□ -1.33
SMNDC1-205ENST00000477763 LCP1P13796 627 aa6.72□□□□□ -1.33
SMNDC1-205ENST00000477763 LSAMPQ13449 338 aa6.72□□□□□ -1.33
SMNDC1-205ENST00000477763 PKN1Q16512 942 aa6.72□□□□□ -1.33
SMNDC1-205ENST00000477763 MROH9Q5TGP6 573 aa6.72□□□□□ -1.33
SMNDC1-205ENST00000477763 STYK1Q6J9G0 422 aa6.72□□□□□ -1.33
SMNDC1-205ENST00000477763 ZC3H14Q6PJT7 736 aaKnown RBP6.72□□□□□ -1.33
SMNDC1-205ENST00000477763 KCNN1Q92952 543 aa6.72□□□□□ -1.33
SMNDC1-205ENST00000477763 PEX11GQ96HA9 241 aa6.72□□□□□ -1.33
SMNDC1-205ENST00000477763 DHRS4Q9BTZ2 278 aa6.72□□□□□ -1.33
SMNDC1-205ENST00000477763 KCNK12Q9HB15 430 aa6.72□□□□□ -1.33
SMNDC1-205ENST00000477763 SIRT5Q9NXA8 310 aa6.72□□□□□ -1.33
SMNDC1-205ENST00000477763 MBD1Q9UIS9 605 aaPredicted RBP6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms