RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 H7C1D1 291 aa13.74□□□□□ -0.21
PRPF39-203ENST00000477626 CDC25AP30304 524 aa13.74□□□□□ -0.21
PRPF39-203ENST00000477626 MTMR2Q13614 643 aa13.74□□□□□ -0.21
PRPF39-203ENST00000477626 KCNB1Q14721 858 aa13.74□□□□□ -0.21
PRPF39-203ENST00000477626 CDKAL1Q5VV42 579 aa13.74□□□□□ -0.21
PRPF39-203ENST00000477626 PRAMEF18Q5VWM3 479 aa13.74□□□□□ -0.21
PRPF39-203ENST00000477626 USP50Q70EL3 339 aaPredicted RBP13.74□□□□□ -0.21
PRPF39-203ENST00000477626 GSDMAQ96QA5 445 aa13.74□□□□□ -0.21
PRPF39-203ENST00000477626 SH2D4AQ9H788 454 aa13.74□□□□□ -0.21
PRPF39-203ENST00000477626 MYH11P35749 1972 aa13.74□□□□□ -0.21
PRPF39-203ENST00000477626 MYPNQ86TC9 1320 aa13.73□□□□□ -0.21
PRPF39-203ENST00000477626 VWA5AO00534 786 aa13.73□□□□□ -0.21
PRPF39-203ENST00000477626 MRPL12P52815 198 aaKnown RBP13.73□□□□□ -0.21
PRPF39-203ENST00000477626 ARHGAP4P98171 946 aa13.73□□□□□ -0.21
PRPF39-203ENST00000477626 KARSQ15046 597 aaKnown RBP13.73□□□□□ -0.21
PRPF39-203ENST00000477626 SLC5A5Q92911 643 aa13.73□□□□□ -0.21
PRPF39-203ENST00000477626 CNMDO75829 334 aa13.73□□□□□ -0.21
PRPF39-203ENST00000477626 MYL1P05976 194 aa13.73□□□□□ -0.21
PRPF39-203ENST00000477626 LETM2Q2VYF4 491 aa13.73□□□□□ -0.21
PRPF39-203ENST00000477626 CATSPERGQ6ZRH7 1159 aa13.73□□□□□ -0.21
PRPF39-203ENST00000477626 SLF1Q9BQI6 1058 aa13.73□□□□□ -0.21
PRPF39-203ENST00000477626 CUEDC2Q9H467 287 aa13.73□□□□□ -0.21
PRPF39-203ENST00000477626 FAM13BQ9NYF5 915 aa13.73□□□□□ -0.21
PRPF39-203ENST00000477626 KCNH4Q9UQ05 1017 aa13.73□□□□□ -0.21
PRPF39-203ENST00000477626 DHX15O43143 795 aaKnown RBP13.73□□□□□ -0.21
PRPF39-203ENST00000477626 ADCY5O95622 1261 aa13.73□□□□□ -0.21
PRPF39-203ENST00000477626 ZNF75DP51815 510 aa13.73□□□□□ -0.21
PRPF39-203ENST00000477626 VGLL4Q14135 290 aa13.73□□□□□ -0.21
PRPF39-203ENST00000477626 KANK3Q6NY19 840 aa13.73□□□□□ -0.21
PRPF39-203ENST00000477626 DTHD1Q6ZMT9 781 aa13.73□□□□□ -0.21
PRPF39-203ENST00000477626 LDHDQ86WU2 507 aa13.73□□□□□ -0.21
PRPF39-203ENST00000477626 ZNF280CQ8ND82 737 aa13.73□□□□□ -0.21
PRPF39-203ENST00000477626 MAGEF1Q9HAY2 307 aa13.73□□□□□ -0.21
PRPF39-203ENST00000477626 MAP3K20Q9NYL2 800 aaKnown RBP13.73□□□□□ -0.21
PRPF39-203ENST00000477626 A0A0G2JLL6 359 aaPredicted RBP13.72□□□□□ -0.21
PRPF39-203ENST00000477626 ADM5C9JUS6 153 aa13.72□□□□□ -0.21
PRPF39-203ENST00000477626 GTPBP6O43824 516 aaPredicted RBP13.72□□□□□ -0.21
PRPF39-203ENST00000477626 PSMD10O75832 226 aa13.72□□□□□ -0.21
PRPF39-203ENST00000477626 OAZ1P54368 228 aa13.72□□□□□ -0.21
PRPF39-203ENST00000477626 MUM1L1Q5H9M0 696 aa13.72□□□□□ -0.21
PRPF39-203ENST00000477626 PRRT2Q7Z6L0 340 aaPredicted RBP13.72□□□□□ -0.21
PRPF39-203ENST00000477626 CNNM3Q8NE01 707 aa13.72□□□□□ -0.21
PRPF39-203ENST00000477626 CYP2W1Q8TAV3 490 aa13.72□□□□□ -0.21
PRPF39-203ENST00000477626 GJA10Q969M2 543 aa13.72□□□□□ -0.21
PRPF39-203ENST00000477626 MRFAP1L1Q96HT8 127 aa13.72□□□□□ -0.21
PRPF39-203ENST00000477626 AGBL1Q96MI9 1066 aa13.72□□□□□ -0.21
PRPF39-203ENST00000477626 RNF181Q9P0P0 153 aa13.72□□□□□ -0.21
PRPF39-203ENST00000477626 RHOBTB3O94955 611 aa13.72□□□□□ -0.21
PRPF39-203ENST00000477626 LDLRAD1Q5T700 205 aa13.72□□□□□ -0.21
PRPF39-203ENST00000477626 DDX25Q9UHL0 483 aaKnown RBP13.72□□□□□ -0.21
PRPF39-203ENST00000477626 GLTPD2A6NH11 291 aa13.72□□□□□ -0.21
PRPF39-203ENST00000477626 MSH4O15457 936 aa13.72□□□□□ -0.21
PRPF39-203ENST00000477626 PLCG1P19174 1290 aa13.72□□□□□ -0.21
PRPF39-203ENST00000477626 PBX1P40424 430 aa13.72□□□□□ -0.21
PRPF39-203ENST00000477626 DCAF15Q66K64 600 aa13.72□□□□□ -0.21
PRPF39-203ENST00000477626 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.72□□□□□ -0.21
PRPF39-203ENST00000477626 CHURC1Q8WUH1 139 aa13.72□□□□□ -0.21
PRPF39-203ENST00000477626 DNAJC19Q96DA6 116 aa13.72□□□□□ -0.21
PRPF39-203ENST00000477626 TRIM34Q9BYJ4 488 aa13.72□□□□□ -0.21
PRPF39-203ENST00000477626 RIPK3Q9Y572 518 aa13.72□□□□□ -0.21
PRPF39-203ENST00000477626 ATP2B2Q01814 1243 aa13.71□□□□□ -0.21
PRPF39-203ENST00000477626 PPP2R5CQ13362 524 aa13.71□□□□□ -0.21
PRPF39-203ENST00000477626 SASS6Q6UVJ0 657 aa13.71□□□□□ -0.21
PRPF39-203ENST00000477626 PRPF38AQ8NAV1 312 aaKnown RBP13.71□□□□□ -0.21
PRPF39-203ENST00000477626 MEIS1O00470 390 aa13.71□□□□□ -0.21
PRPF39-203ENST00000477626 NFIBO00712 420 aa13.71□□□□□ -0.21
PRPF39-203ENST00000477626 FOSP01100 380 aaPredicted RBP13.71□□□□□ -0.21
PRPF39-203ENST00000477626 BCRP11274 1271 aa13.71□□□□□ -0.21
PRPF39-203ENST00000477626 HOXA7P31268 230 aaPredicted RBP13.71□□□□□ -0.21
PRPF39-203ENST00000477626 DSG3P32926 999 aa13.71□□□□□ -0.21
PRPF39-203ENST00000477626 CALCRLQ16602 461 aa13.71□□□□□ -0.21
PRPF39-203ENST00000477626 ZC3H3Q8IXZ2 948 aaKnown RBP13.71□□□□□ -0.21
PRPF39-203ENST00000477626 DHX58Q96C10 678 aa13.71□□□□□ -0.21
PRPF39-203ENST00000477626 PYM1Q9BRP8 204 aaKnown RBP13.71□□□□□ -0.21
PRPF39-203ENST00000477626 RRAGDQ9NQL2 400 aaPredicted RBP13.71□□□□□ -0.21
PRPF39-203ENST00000477626 GJA5P36382 358 aa13.7□□□□□ -0.22
PRPF39-203ENST00000477626 MRPS9P82933 396 aaKnown RBP13.7□□□□□ -0.22
PRPF39-203ENST00000477626 FOXR2Q6PJQ5 311 aa13.7□□□□□ -0.22
PRPF39-203ENST00000477626 NIPA1Q7RTP0 329 aa13.7□□□□□ -0.22
PRPF39-203ENST00000477626 IRF2BP1Q8IU81 584 aa13.7□□□□□ -0.22
PRPF39-203ENST00000477626 ENOX1Q8TC92 643 aaKnown RBP13.7□□□□□ -0.22
PRPF39-203ENST00000477626 WRNIP1Q96S55 665 aa13.7□□□□□ -0.22
PRPF39-203ENST00000477626 TRIM9Q9C026 710 aa13.7□□□□□ -0.22
PRPF39-203ENST00000477626 C19orf81C9J6K1 198 aa13.7□□□□□ -0.22
PRPF39-203ENST00000477626 SLC12A3P55017 1021 aa13.7□□□□□ -0.22
PRPF39-203ENST00000477626 IQUBQ8NA54 791 aa13.7□□□□□ -0.22
PRPF39-203ENST00000477626 GIMAP8Q8ND71 665 aaPredicted RBP13.7□□□□□ -0.22
PRPF39-203ENST00000477626 RPAP3Q9H6T3 665 aaPredicted RBP13.7□□□□□ -0.22
PRPF39-203ENST00000477626 UBIAD1Q9Y5Z9 338 aa13.7□□□□□ -0.22
PRPF39-203ENST00000477626 POTEMA6NI47 508 aa13.7□□□□□ -0.22
PRPF39-203ENST00000477626 ATP2B1P20020 1258 aa13.7□□□□□ -0.22
PRPF39-203ENST00000477626 ERCC5P28715 1186 aaPredicted RBP13.7□□□□□ -0.22
PRPF39-203ENST00000477626 TECP42680 631 aa13.7□□□□□ -0.22
PRPF39-203ENST00000477626 MCCD1P59942 119 aaPredicted RBP13.7□□□□□ -0.22
PRPF39-203ENST00000477626 GPAT2Q6NUI2 795 aa13.7□□□□□ -0.22
PRPF39-203ENST00000477626 IL31RAQ8NI17 732 aa13.7□□□□□ -0.22
PRPF39-203ENST00000477626 NAP1L4Q99733 375 aaKnown RBP13.7□□□□□ -0.22
PRPF39-203ENST00000477626 HSD17B14Q9BPX1 270 aa13.7□□□□□ -0.22
PRPF39-203ENST00000477626 SPDYE16A6NNV3 312 aaPredicted RBP13.69□□□□□ -0.22
PRPF39-203ENST00000477626 ITGB5P18084 799 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms