RNA–Protein interactions for RNA: ENST00000477221.2

FRMD4A-206, Transcript of FERM domain containing 4A, humanhuman

TSL 2

Gene FRMD4A, Length 495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD4A-206ENST00000477221 TIMP1P01033 207 aa11.59□□□□□ -0.55
FRMD4A-206ENST00000477221 EIF2AK2P19525 551 aaKnown RBP11.59□□□□□ -0.55
FRMD4A-206ENST00000477221 TROAPQ12815 778 aa11.59□□□□□ -0.55
FRMD4A-206ENST00000477221 COL9A3Q14050 684 aaPredicted RBP11.59□□□□□ -0.55
FRMD4A-206ENST00000477221 BMP2KLQ5H9B9 411 aa11.59□□□□□ -0.55
FRMD4A-206ENST00000477221 ARHGEF16Q5VV41 709 aa11.59□□□□□ -0.55
FRMD4A-206ENST00000477221 CREB3L3Q68CJ9 461 aa11.59□□□□□ -0.55
FRMD4A-206ENST00000477221 CASC1Q6TDU7 716 aa11.59□□□□□ -0.55
FRMD4A-206ENST00000477221 MTMR8Q96EF0 704 aa11.59□□□□□ -0.55
FRMD4A-206ENST00000477221 RMDN3Q96TC7 470 aa11.59□□□□□ -0.55
FRMD4A-206ENST00000477221 LY9Q9HBG7 655 aa11.59□□□□□ -0.55
FRMD4A-206ENST00000477221 RANBP2P49792 3224 aaKnown RBP11.58□□□□□ -0.56
FRMD4A-206ENST00000477221 NKRFO15226 690 aaKnown RBP eCLIP11.58□□□□□ -0.56
FRMD4A-206ENST00000477221 CYTH3O43739 400 aa11.58□□□□□ -0.56
FRMD4A-206ENST00000477221 HOXA13P31271 388 aaPredicted RBP11.58□□□□□ -0.56
FRMD4A-206ENST00000477221 CPT1AP50416 773 aa11.58□□□□□ -0.56
FRMD4A-206ENST00000477221 HSD17B4P51659 736 aa11.58□□□□□ -0.56
FRMD4A-206ENST00000477221 TTLL4Q14679 1199 aa11.58□□□□□ -0.56
FRMD4A-206ENST00000477221 STXBP2Q15833 593 aa11.58□□□□□ -0.56
FRMD4A-206ENST00000477221 LY6KQ17RY6 165 aa11.58□□□□□ -0.56
FRMD4A-206ENST00000477221 GPR153Q6NV75 609 aa11.58□□□□□ -0.56
FRMD4A-206ENST00000477221 NFXL1Q6ZNB6 911 aa11.58□□□□□ -0.56
FRMD4A-206ENST00000477221 ZNF654Q8IZM8 581 aa11.58□□□□□ -0.56
FRMD4A-206ENST00000477221 SLC43A3Q8NBI5 491 aa11.58□□□□□ -0.56
FRMD4A-206ENST00000477221 PPP1R13LQ8WUF5 828 aa11.58□□□□□ -0.56
FRMD4A-206ENST00000477221 RNPC3Q96LT9 517 aaKnown RBP11.58□□□□□ -0.56
FRMD4A-206ENST00000477221 MAF1Q9H063 256 aa11.58□□□□□ -0.56
FRMD4A-206ENST00000477221 TRPV6Q9H1D0 765 aa11.58□□□□□ -0.56
FRMD4A-206ENST00000477221 RIOX1Q9H6W3 641 aa11.58□□□□□ -0.56
FRMD4A-206ENST00000477221 PXMP2Q9NR77 195 aa11.58□□□□□ -0.56
FRMD4A-206ENST00000477221 POLR3EQ9NVU0 708 aa11.58□□□□□ -0.56
FRMD4A-206ENST00000477221 LCTP09848 1927 aa11.58□□□□□ -0.56
FRMD4A-206ENST00000477221 LTBP2Q14767 1821 aa11.58□□□□□ -0.56
FRMD4A-206ENST00000477221 MCM3APO60318 1980 aa11.58□□□□□ -0.56
FRMD4A-206ENST00000477221 PNMA6FA0A0J9YX94 578 aa11.57□□□□□ -0.56
FRMD4A-206ENST00000477221 CCDC69A6NI79 296 aa11.57□□□□□ -0.56
FRMD4A-206ENST00000477221 SH2B2O14492 632 aaPredicted RBP11.57□□□□□ -0.56
FRMD4A-206ENST00000477221 B4GALT4O60513 344 aa11.57□□□□□ -0.56
FRMD4A-206ENST00000477221 CD4P01730 458 aa11.57□□□□□ -0.56
FRMD4A-206ENST00000477221 NR3C2P08235 984 aa11.57□□□□□ -0.56
FRMD4A-206ENST00000477221 MYCLP12524 364 aaPredicted RBP11.57□□□□□ -0.56
FRMD4A-206ENST00000477221 CSF2RAP15509 400 aa11.57□□□□□ -0.56
FRMD4A-206ENST00000477221 RXRAP19793 462 aa11.57□□□□□ -0.56
FRMD4A-206ENST00000477221 CYP2C18P33260 490 aa11.57□□□□□ -0.56
FRMD4A-206ENST00000477221 MCM5P33992 734 aa11.57□□□□□ -0.56
FRMD4A-206ENST00000477221 CHMP4BP1P59074 171 aa11.57□□□□□ -0.56
FRMD4A-206ENST00000477221 PURAQ00577 322 aaKnown RBP11.57□□□□□ -0.56
FRMD4A-206ENST00000477221 NECTIN1Q15223 517 aa11.57□□□□□ -0.56
FRMD4A-206ENST00000477221 BRDTQ58F21 947 aaPredicted RBP11.57□□□□□ -0.56
FRMD4A-206ENST00000477221 MFSD5Q6N075 450 aa11.57□□□□□ -0.56
FRMD4A-206ENST00000477221 FCHSD1Q86WN1 690 aa11.57□□□□□ -0.56
FRMD4A-206ENST00000477221 RAB11FIP4Q86YS3 637 aa11.57□□□□□ -0.56
FRMD4A-206ENST00000477221 CTCFLQ8NI51 663 aaPredicted RBP11.57□□□□□ -0.56
FRMD4A-206ENST00000477221 CCDC136Q96JN2 1154 aa11.57□□□□□ -0.56
FRMD4A-206ENST00000477221 FAM161BQ96MY7 647 aa11.57□□□□□ -0.56
FRMD4A-206ENST00000477221 IWS1Q96ST2 819 aa11.57□□□□□ -0.56
FRMD4A-206ENST00000477221 LRRC2Q9BYS8 371 aa11.57□□□□□ -0.56
FRMD4A-206ENST00000477221 UMODL1Q5DID0 1318 aa11.57□□□□□ -0.56
FRMD4A-206ENST00000477221 A6NJR5 290 aa11.56□□□□□ -0.56
FRMD4A-206ENST00000477221 GCOM1H8Y6P7 765 aaPredicted RBP11.56□□□□□ -0.56
FRMD4A-206ENST00000477221 CDC45O75419 566 aa11.56□□□□□ -0.56
FRMD4A-206ENST00000477221 DDAH1O94760 285 aa11.56□□□□□ -0.56
FRMD4A-206ENST00000477221 PLEKHA8P1O95397 391 aa11.56□□□□□ -0.56
FRMD4A-206ENST00000477221 GH1P01241 217 aa11.56□□□□□ -0.56
FRMD4A-206ENST00000477221 POLR2MP0CAP2 368 aa11.56□□□□□ -0.56
FRMD4A-206ENST00000477221 ACRP10323 421 aa11.56□□□□□ -0.56
FRMD4A-206ENST00000477221 CCL23P55773 120 aa11.56□□□□□ -0.56
FRMD4A-206ENST00000477221 FAM47CQ5HY64 1035 aa11.56□□□□□ -0.56
FRMD4A-206ENST00000477221 CCDC62Q6P9F0 684 aa11.56□□□□□ -0.56
FRMD4A-206ENST00000477221 CMTR1Q8N1G2 835 aaKnown RBP11.56□□□□□ -0.56
FRMD4A-206ENST00000477221 TMEM199Q8N511 208 aa11.56□□□□□ -0.56
FRMD4A-206ENST00000477221 AFG1LQ8WV93 481 aa11.56□□□□□ -0.56
FRMD4A-206ENST00000477221 ZFP91Q96JP5 570 aaPredicted RBP11.56□□□□□ -0.56
FRMD4A-206ENST00000477221 TMEM87BQ96K49 555 aa11.56□□□□□ -0.56
FRMD4A-206ENST00000477221 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.56□□□□□ -0.56
FRMD4A-206ENST00000477221 PDCD2LQ9BRP1 358 aa11.56□□□□□ -0.56
FRMD4A-206ENST00000477221 MTG1Q9BT17 334 aaPredicted RBP11.56□□□□□ -0.56
FRMD4A-206ENST00000477221 ALDH8A1Q9H2A2 487 aaPredicted RBP11.56□□□□□ -0.56
FRMD4A-206ENST00000477221 HIPK3Q9H422 1215 aa11.56□□□□□ -0.56
FRMD4A-206ENST00000477221 MTMR10Q9NXD2 777 aa11.56□□□□□ -0.56
FRMD4A-206ENST00000477221 SORBS3O60504 671 aa11.55□□□□□ -0.56
FRMD4A-206ENST00000477221 EIF3JO75822 258 aaKnown RBP11.55□□□□□ -0.56
FRMD4A-206ENST00000477221 CYP2C9P11712 490 aa11.55□□□□□ -0.56
FRMD4A-206ENST00000477221 KIF5BP33176 963 aa11.55□□□□□ -0.56
FRMD4A-206ENST00000477221 GHRHRQ02643 423 aa11.55□□□□□ -0.56
FRMD4A-206ENST00000477221 TRAF1Q13077 416 aa11.55□□□□□ -0.56
FRMD4A-206ENST00000477221 PPIGQ13427 754 aaKnown RBP eCLIP11.55□□□□□ -0.56
FRMD4A-206ENST00000477221 NBPF20Q3BBV1 942 aa11.55□□□□□ -0.56
FRMD4A-206ENST00000477221 ZNF697Q5TEC3 545 aa11.55□□□□□ -0.56
FRMD4A-206ENST00000477221 RNF20Q5VTR2 975 aa11.55□□□□□ -0.56
FRMD4A-206ENST00000477221 C16orf59Q7L2K0 433 aa11.55□□□□□ -0.56
FRMD4A-206ENST00000477221 IL31RAQ8NI17 732 aa11.55□□□□□ -0.56
FRMD4A-206ENST00000477221 RRP36Q96EU6 259 aaKnown RBP11.55□□□□□ -0.56
FRMD4A-206ENST00000477221 MTA3Q9BTC8 594 aa11.55□□□□□ -0.56
FRMD4A-206ENST00000477221 NOC4LQ9BVI4 516 aaKnown RBP11.55□□□□□ -0.56
FRMD4A-206ENST00000477221 SEZ6LQ9BYH1 1024 aa11.55□□□□□ -0.56
FRMD4A-206ENST00000477221 TRMT13Q9NUP7 481 aaKnown RBP11.55□□□□□ -0.56
FRMD4A-206ENST00000477221 MRVI1Q9Y6F6 885 aa11.55□□□□□ -0.56
FRMD4A-206ENST00000477221 DNAH12Q6ZR08 3092 aa11.55□□□□□ -0.56
FRMD4A-206ENST00000477221 MMP3P08254 477 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms