RNA–Protein interactions for RNA: ENST00000476961.5

CNTNAP3B-205, Transcript of contactin associated protein like 3B, humanhuman

TSL 1 (best)

Gene CNTNAP3B, Length 2,643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-205ENST00000476961 NEK1Q96PY6 1258 aa9.17□□□□□ -0.94
CNTNAP3B-205ENST00000476961 GSDMAQ96QA5 445 aa9.17□□□□□ -0.94
CNTNAP3B-205ENST00000476961 PUS3Q9BZE2 481 aaKnown RBP9.17□□□□□ -0.94
CNTNAP3B-205ENST00000476961 SUGCTQ9HAC7 445 aa9.17□□□□□ -0.94
CNTNAP3B-205ENST00000476961 ABCB6Q9NP58 842 aa9.17□□□□□ -0.94
CNTNAP3B-205ENST00000476961 KLHL42Q9P2K6 505 aa9.17□□□□□ -0.94
CNTNAP3B-205ENST00000476961 STXBP3O00186 592 aa9.16□□□□□ -0.94
CNTNAP3B-205ENST00000476961 SPTLC2O15270 562 aa9.16□□□□□ -0.94
CNTNAP3B-205ENST00000476961 ST18O60284 1047 aa9.16□□□□□ -0.94
CNTNAP3B-205ENST00000476961 PFDN1O60925 122 aa9.16□□□□□ -0.94
CNTNAP3B-205ENST00000476961 CLTAP09496 248 aa9.16□□□□□ -0.94
CNTNAP3B-205ENST00000476961 PMS2P54278 862 aa9.16□□□□□ -0.94
CNTNAP3B-205ENST00000476961 CDK17Q00537 523 aa9.16□□□□□ -0.94
CNTNAP3B-205ENST00000476961 PPIDQ08752 370 aaKnown RBP9.16□□□□□ -0.94
CNTNAP3B-205ENST00000476961 PPFIA1Q13136 1202 aa9.16□□□□□ -0.94
CNTNAP3B-205ENST00000476961 INAQ16352 499 aa9.16□□□□□ -0.94
CNTNAP3B-205ENST00000476961 SARM1Q6SZW1 724 aa9.16□□□□□ -0.94
CNTNAP3B-205ENST00000476961 C3orf67Q6ZVT6 689 aa9.16□□□□□ -0.94
CNTNAP3B-205ENST00000476961 ESX1Q8N693 406 aa9.16□□□□□ -0.94
CNTNAP3B-205ENST00000476961 RHPN1Q8TCX5 695 aa9.16□□□□□ -0.94
CNTNAP3B-205ENST00000476961 DYDC1Q8WWB3 177 aa9.16□□□□□ -0.94
CNTNAP3B-205ENST00000476961 OSBPL1AQ9BXW6 950 aa9.16□□□□□ -0.94
CNTNAP3B-205ENST00000476961 DHX36Q9H2U1 1008 aaKnown RBP9.16□□□□□ -0.94
CNTNAP3B-205ENST00000476961 VIPAS39Q9H9C1 493 aa9.16□□□□□ -0.94
CNTNAP3B-205ENST00000476961 NOD2Q9HC29 1040 aa9.16□□□□□ -0.94
CNTNAP3B-205ENST00000476961 ZNF304Q9HCX3 659 aa9.16□□□□□ -0.94
CNTNAP3B-205ENST00000476961 NUP98P52948 1817 aa9.16□□□□□ -0.94
CNTNAP3B-205ENST00000476961 LRRIQ3A6PVS8 624 aaPredicted RBP9.16□□□□□ -0.94
CNTNAP3B-205ENST00000476961 POTEB2H3BUK9 544 aa9.16□□□□□ -0.94
CNTNAP3B-205ENST00000476961 TBCAO75347 108 aaKnown RBP9.16□□□□□ -0.94
CNTNAP3B-205ENST00000476961 CYP1A2P05177 515 aa9.16□□□□□ -0.94
CNTNAP3B-205ENST00000476961 GUCY2FP51841 1108 aa9.16□□□□□ -0.94
CNTNAP3B-205ENST00000476961 KIF11P52732 1056 aa9.16□□□□□ -0.94
CNTNAP3B-205ENST00000476961 MXRA7P84157 204 aa9.16□□□□□ -0.94
CNTNAP3B-205ENST00000476961 ZNF713Q8N859 430 aaPredicted RBP9.16□□□□□ -0.94
CNTNAP3B-205ENST00000476961 ATP6V0A1Q93050 837 aa9.16□□□□□ -0.94
CNTNAP3B-205ENST00000476961 ZNF653Q96CK0 615 aa9.16□□□□□ -0.94
CNTNAP3B-205ENST00000476961 IL1RAPL2Q9NP60 686 aa9.16□□□□□ -0.94
CNTNAP3B-205ENST00000476961 DMAP1Q9NPF5 467 aaPredicted RBP9.16□□□□□ -0.94
CNTNAP3B-205ENST00000476961 DKK3Q9UBP4 350 aa9.16□□□□□ -0.94
CNTNAP3B-205ENST00000476961 CEP131Q9UPN4 1083 aa9.16□□□□□ -0.94
CNTNAP3B-205ENST00000476961 ANKRD36CQ5JPF3 1778 aa9.15□□□□□ -0.94
CNTNAP3B-205ENST00000476961 TAF1LQ8IZX4 1826 aa9.15□□□□□ -0.94
CNTNAP3B-205ENST00000476961 SALL3Q9BXA9 1300 aa9.15□□□□□ -0.94
CNTNAP3B-205ENST00000476961 A0A1B0GVL5 298 aa9.15□□□□□ -0.94
CNTNAP3B-205ENST00000476961 LINC00854A0A1B0GVQ3 168 aa9.15□□□□□ -0.94
CNTNAP3B-205ENST00000476961 BECN2A8MW95 431 aa9.15□□□□□ -0.94
CNTNAP3B-205ENST00000476961 TTI1O43156 1089 aa9.15□□□□□ -0.94
CNTNAP3B-205ENST00000476961 ATP6V1G2O95670 118 aa9.15□□□□□ -0.94
CNTNAP3B-205ENST00000476961 VIMP08670 466 aaKnown RBP9.15□□□□□ -0.94
CNTNAP3B-205ENST00000476961 NFKBIAP25963 317 aa9.15□□□□□ -0.94
CNTNAP3B-205ENST00000476961 PTPN12Q05209 780 aaKnown RBP9.15□□□□□ -0.94
CNTNAP3B-205ENST00000476961 TYRO3Q06418 890 aa9.15□□□□□ -0.94
CNTNAP3B-205ENST00000476961 CFAP157Q5JU67 520 aa9.15□□□□□ -0.94
CNTNAP3B-205ENST00000476961 ADALQ6DHV7 355 aa9.15□□□□□ -0.94
CNTNAP3B-205ENST00000476961 SLC2A7Q6PXP3 512 aa9.15□□□□□ -0.94
CNTNAP3B-205ENST00000476961 Q6ZUG5 572 aa9.15□□□□□ -0.94
CNTNAP3B-205ENST00000476961 HOMER1Q86YM7 354 aa9.15□□□□□ -0.94
CNTNAP3B-205ENST00000476961 PROM2Q8N271 834 aa9.15□□□□□ -0.94
CNTNAP3B-205ENST00000476961 TEX9Q8N6V9 391 aa9.15□□□□□ -0.94
CNTNAP3B-205ENST00000476961 MSANTD4Q8NCY6 345 aa9.15□□□□□ -0.94
CNTNAP3B-205ENST00000476961 NSUN7Q8NE18 718 aaKnown RBP9.15□□□□□ -0.94
CNTNAP3B-205ENST00000476961 VTI1AQ96AJ9 217 aa9.15□□□□□ -0.94
CNTNAP3B-205ENST00000476961 PLA2G12BQ9BX93 195 aa9.15□□□□□ -0.94
CNTNAP3B-205ENST00000476961 ANKZF1Q9H8Y5 726 aa9.15□□□□□ -0.94
CNTNAP3B-205ENST00000476961 GGA2Q9UJY4 613 aa9.15□□□□□ -0.94
CNTNAP3B-205ENST00000476961 IKBKGQ9Y6K9 419 aa9.15□□□□□ -0.94
CNTNAP3B-205ENST00000476961 C4BP0C0L5 1744 aa9.15□□□□□ -0.95
CNTNAP3B-205ENST00000476961 SPDYE5A6NIY4 337 aa9.15□□□□□ -0.95
CNTNAP3B-205ENST00000476961 TBC1D12O60347 775 aa9.15□□□□□ -0.95
CNTNAP3B-205ENST00000476961 MGEA5O60502 916 aa9.15□□□□□ -0.95
CNTNAP3B-205ENST00000476961 STAM2O75886 525 aa9.15□□□□□ -0.95
CNTNAP3B-205ENST00000476961 SUSD4Q5VX71 490 aa9.15□□□□□ -0.95
CNTNAP3B-205ENST00000476961 C11orf74Q86VG3 221 aa9.15□□□□□ -0.95
CNTNAP3B-205ENST00000476961 ZNF280CQ8ND82 737 aa9.15□□□□□ -0.95
CNTNAP3B-205ENST00000476961 COPRSQ9NQ92 184 aa9.15□□□□□ -0.95
CNTNAP3B-205ENST00000476961 TRMT112Q9UI30 125 aaKnown RBP9.15□□□□□ -0.95
CNTNAP3B-205ENST00000476961 LNPEPQ9UIQ6 1025 aa9.15□□□□□ -0.95
CNTNAP3B-205ENST00000476961 CFAP45Q9UL16 551 aa9.15□□□□□ -0.95
CNTNAP3B-205ENST00000476961 TMCC3Q9ULS5 477 aa9.15□□□□□ -0.95
CNTNAP3B-205ENST00000476961 RTCBQ9Y3I0 505 aaKnown RBP9.15□□□□□ -0.95
CNTNAP3B-205ENST00000476961 UPP2O95045 317 aa9.14□□□□□ -0.95
CNTNAP3B-205ENST00000476961 ZNF202O95125 648 aa9.14□□□□□ -0.95
CNTNAP3B-205ENST00000476961 HSPA1AP0DMV8 641 aaKnown RBP9.14□□□□□ -0.95
CNTNAP3B-205ENST00000476961 HSPA1BP0DMV9 641 aaKnown RBP9.14□□□□□ -0.95
CNTNAP3B-205ENST00000476961 GSPT1P15170 499 aaKnown RBP9.14□□□□□ -0.95
CNTNAP3B-205ENST00000476961 SH3BGRP55822 239 aaPredicted RBP9.14□□□□□ -0.95
CNTNAP3B-205ENST00000476961 GSDMDP57764 484 aa9.14□□□□□ -0.95
CNTNAP3B-205ENST00000476961 XRCC4Q13426 336 aa9.14□□□□□ -0.95
CNTNAP3B-205ENST00000476961 MAP7Q14244 749 aa9.14□□□□□ -0.95
CNTNAP3B-205ENST00000476961 BCL2A1Q16548 175 aa9.14□□□□□ -0.95
CNTNAP3B-205ENST00000476961 SLC27A3Q5K4L6 730 aa9.14□□□□□ -0.95
CNTNAP3B-205ENST00000476961 CCBE1Q6UXH8 406 aaPredicted RBP9.14□□□□□ -0.95
CNTNAP3B-205ENST00000476961 STK11IPQ8N1F8 1099 aa9.14□□□□□ -0.95
CNTNAP3B-205ENST00000476961 CCHCR1Q8TD31 782 aa9.14□□□□□ -0.95
CNTNAP3B-205ENST00000476961 APPBP2Q92624 585 aa9.14□□□□□ -0.95
CNTNAP3B-205ENST00000476961 CENPTQ96BT3 561 aa9.14□□□□□ -0.95
CNTNAP3B-205ENST00000476961 INO80BQ9C086 356 aaPredicted RBP9.14□□□□□ -0.95
CNTNAP3B-205ENST00000476961 SIL1Q9H173 461 aa9.14□□□□□ -0.95
CNTNAP3B-205ENST00000476961 HAUS2Q9NVX0 235 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms