RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 RPS6P62753 249 aaKnown RBP14.13□□□□□ -0.15
HDAC6-219ENST00000476625 USH1GQ495M9 461 aa14.13□□□□□ -0.15
HDAC6-219ENST00000476625 BTNL9Q6UXG8 535 aa14.13□□□□□ -0.15
HDAC6-219ENST00000476625 RNF207Q6ZRF8 634 aa14.13□□□□□ -0.15
HDAC6-219ENST00000476625 HERC6Q8IVU3 1022 aa14.13□□□□□ -0.15
HDAC6-219ENST00000476625 DHX38Q92620 1227 aaKnown RBP14.13□□□□□ -0.15
HDAC6-219ENST00000476625 ZKSCAN3Q9BRR0 538 aa14.13□□□□□ -0.15
HDAC6-219ENST00000476625 CD320Q9NPF0 282 aa14.13□□□□□ -0.15
HDAC6-219ENST00000476625 MTUS1Q9ULD2 1270 aa14.13□□□□□ -0.15
HDAC6-219ENST00000476625 DOCK5Q9H7D0 1870 aa14.12□□□□□ -0.15
HDAC6-219ENST00000476625 ERC2O15083 957 aa14.12□□□□□ -0.15
HDAC6-219ENST00000476625 SORBS3O60504 671 aa14.12□□□□□ -0.15
HDAC6-219ENST00000476625 PDHBP11177 359 aa14.12□□□□□ -0.15
HDAC6-219ENST00000476625 MX1P20591 662 aa14.12□□□□□ -0.15
HDAC6-219ENST00000476625 CPT1AP50416 773 aa14.12□□□□□ -0.15
HDAC6-219ENST00000476625 PDE4DQ08499 809 aa14.12□□□□□ -0.15
HDAC6-219ENST00000476625 PPP2R5BQ15173 497 aa14.12□□□□□ -0.15
HDAC6-219ENST00000476625 GDF6Q6KF10 455 aaPredicted RBP14.12□□□□□ -0.15
HDAC6-219ENST00000476625 CHST3Q7LGC8 479 aa14.12□□□□□ -0.15
HDAC6-219ENST00000476625 ZNF589Q86UQ0 364 aaPredicted RBP14.12□□□□□ -0.15
HDAC6-219ENST00000476625 WNT8BQ93098 351 aa14.12□□□□□ -0.15
HDAC6-219ENST00000476625 CHMP4BQ9H444 224 aaKnown RBP14.12□□□□□ -0.15
HDAC6-219ENST00000476625 COL20A1Q9P218 1284 aa14.12□□□□□ -0.15
HDAC6-219ENST00000476625 ANAPC4Q9UJX5 808 aa14.12□□□□□ -0.15
HDAC6-219ENST00000476625 TLL1O43897 1013 aa14.11□□□□□ -0.15
HDAC6-219ENST00000476625 ORC4O43929 436 aa14.11□□□□□ -0.15
HDAC6-219ENST00000476625 TXNP10599 105 aaKnown RBP14.11□□□□□ -0.15
HDAC6-219ENST00000476625 EDNRBP24530 442 aa14.11□□□□□ -0.15
HDAC6-219ENST00000476625 LY6KQ17RY6 165 aa14.11□□□□□ -0.15
HDAC6-219ENST00000476625 TBC1D10CQ8IV04 446 aa14.11□□□□□ -0.15
HDAC6-219ENST00000476625 AFG1LQ8WV93 481 aa14.11□□□□□ -0.15
HDAC6-219ENST00000476625 FAM122AQ96E09 287 aa14.11□□□□□ -0.15
HDAC6-219ENST00000476625 SLC9A7Q96T83 725 aa14.11□□□□□ -0.15
HDAC6-219ENST00000476625 LRFN3Q9BTN0 628 aa14.11□□□□□ -0.15
HDAC6-219ENST00000476625 UBA5Q9GZZ9 404 aa14.11□□□□□ -0.15
HDAC6-219ENST00000476625 TSPYL2Q9H2G4 693 aaPredicted RBP14.11□□□□□ -0.15
HDAC6-219ENST00000476625 C11orf16Q9NQ32 467 aa14.11□□□□□ -0.15
HDAC6-219ENST00000476625 GPHNQ9NQX3 736 aaPredicted RBP14.11□□□□□ -0.15
HDAC6-219ENST00000476625 ADD3Q9UEY8 706 aaKnown RBP14.11□□□□□ -0.15
HDAC6-219ENST00000476625 NEDD4P46934 1319 aa14.11□□□□□ -0.15
HDAC6-219ENST00000476625 A6NJR5 290 aa14.1□□□□□ -0.15
HDAC6-219ENST00000476625 GTPBP6O43824 516 aaPredicted RBP14.1□□□□□ -0.15
HDAC6-219ENST00000476625 FGAP02671 866 aa14.1□□□□□ -0.15
HDAC6-219ENST00000476625 SUPT20HL2P0C7V6 817 aa14.1□□□□□ -0.15
HDAC6-219ENST00000476625 TOP1P11387 765 aaKnown RBP14.1□□□□□ -0.15
HDAC6-219ENST00000476625 ACTN1P12814 892 aa14.1□□□□□ -0.15
HDAC6-219ENST00000476625 WDR5P61964 334 aaKnown RBP14.1□□□□□ -0.15
HDAC6-219ENST00000476625 ZNF543Q08ER8 600 aa14.1□□□□□ -0.15
HDAC6-219ENST00000476625 HIC1Q14526 733 aa14.1□□□□□ -0.15
HDAC6-219ENST00000476625 PTGISQ16647 500 aa14.1□□□□□ -0.15
HDAC6-219ENST00000476625 FAM117BQ6P1L5 589 aa14.1□□□□□ -0.15
HDAC6-219ENST00000476625 SEPT14Q6ZU15 432 aa14.1□□□□□ -0.15
HDAC6-219ENST00000476625 KAT2BQ92831 832 aa14.1□□□□□ -0.15
HDAC6-219ENST00000476625 TAAR1Q96RJ0 339 aa14.1□□□□□ -0.15
HDAC6-219ENST00000476625 MICAL3Q7RTP6 2002 aa14.1□□□□□ -0.15
HDAC6-219ENST00000476625 NLRC5Q86WI3 1866 aa14.1□□□□□ -0.15
HDAC6-219ENST00000476625 NBNO60934 754 aa14.09□□□□□ -0.15
HDAC6-219ENST00000476625 PFKMP08237 780 aa14.09□□□□□ -0.15
HDAC6-219ENST00000476625 MMP3P08254 477 aa14.09□□□□□ -0.15
HDAC6-219ENST00000476625 FGRP09769 529 aa14.09□□□□□ -0.15
HDAC6-219ENST00000476625 POU3F3P20264 500 aaPredicted RBP14.09□□□□□ -0.15
HDAC6-219ENST00000476625 ZNF200P98182 395 aaPredicted RBP14.09□□□□□ -0.15
HDAC6-219ENST00000476625 ARHGAP1Q07960 439 aa14.09□□□□□ -0.15
HDAC6-219ENST00000476625 NMIQ13287 307 aaPredicted RBP14.09□□□□□ -0.15
HDAC6-219ENST00000476625 NFRKBQ6P4R8 1299 aa14.09□□□□□ -0.15
HDAC6-219ENST00000476625 RETREG2Q8NC44 543 aa14.09□□□□□ -0.15
HDAC6-219ENST00000476625 SCFD2Q8WU76 684 aa14.09□□□□□ -0.15
HDAC6-219ENST00000476625 SEZ6LQ9BYH1 1024 aa14.09□□□□□ -0.15
HDAC6-219ENST00000476625 NOD1Q9Y239 953 aa14.09□□□□□ -0.15
HDAC6-219ENST00000476625 PITPNM1O00562 1244 aa14.08□□□□□ -0.16
HDAC6-219ENST00000476625 ZNF286BP0CG31 522 aa14.08□□□□□ -0.16
HDAC6-219ENST00000476625 LRRFIP1Q32MZ4 808 aaKnown RBP14.08□□□□□ -0.16
HDAC6-219ENST00000476625 CCDC62Q6P9F0 684 aa14.08□□□□□ -0.16
HDAC6-219ENST00000476625 ZFP91Q96JP5 570 aaPredicted RBP14.08□□□□□ -0.16
HDAC6-219ENST00000476625 ALG1Q9BT22 464 aa14.08□□□□□ -0.16
HDAC6-219ENST00000476625 OSBPL7Q9BZF2 842 aa14.08□□□□□ -0.16
HDAC6-219ENST00000476625 HSPD1P10809 573 aaKnown RBP14.07□□□□□ -0.16
HDAC6-219ENST00000476625 RFC2P35250 354 aa14.07□□□□□ -0.16
HDAC6-219ENST00000476625 MBTPS1Q14703 1052 aa14.07□□□□□ -0.16
HDAC6-219ENST00000476625 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.07□□□□□ -0.16
HDAC6-219ENST00000476625 LRRC8DQ7L1W4 858 aa14.07□□□□□ -0.16
HDAC6-219ENST00000476625 HLA-CQ95604 372 aa14.07□□□□□ -0.16
HDAC6-219ENST00000476625 HDAC6Q9UBN7 1215 aa14.07□□□□□ -0.16
HDAC6-219ENST00000476625 BDP1A6H8Y1 2624 aa14.06□□□□□ -0.16
HDAC6-219ENST00000476625 SNHG28P0DPA3 235 aa14.06□□□□□ -0.16
HDAC6-219ENST00000476625 KCNJ6P48051 423 aa14.06□□□□□ -0.16
HDAC6-219ENST00000476625 BFSP2Q13515 415 aa14.06□□□□□ -0.16
HDAC6-219ENST00000476625 ALX1Q15699 326 aa14.06□□□□□ -0.16
HDAC6-219ENST00000476625 CDC37Q16543 378 aaPredicted RBP14.06□□□□□ -0.16
HDAC6-219ENST00000476625 AAK1Q2M2I8 961 aa14.06□□□□□ -0.16
HDAC6-219ENST00000476625 PPP4R3BQ5MIZ7 849 aa14.06□□□□□ -0.16
HDAC6-219ENST00000476625 ANKRD45Q5TZF3 282 aa14.06□□□□□ -0.16
HDAC6-219ENST00000476625 TRAF7Q6Q0C0 670 aa14.06□□□□□ -0.16
HDAC6-219ENST00000476625 PHOSPHO2Q8TCD6 241 aa14.06□□□□□ -0.16
HDAC6-219ENST00000476625 SYTL5Q8TDW5 730 aaPredicted RBP14.06□□□□□ -0.16
HDAC6-219ENST00000476625 C1QTNF1Q9BXJ1 281 aa14.06□□□□□ -0.16
HDAC6-219ENST00000476625 SUGCTQ9HAC7 445 aa14.06□□□□□ -0.16
HDAC6-219ENST00000476625 RAD50Q92878 1312 aa14.06□□□□□ -0.16
HDAC6-219ENST00000476625 NKRFO15226 690 aaKnown RBP eCLIP14.05□□□□□ -0.16
HDAC6-219ENST00000476625 CKBP12277 381 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms