RNA–Protein interactions for RNA: ENST00000475772.5

CALD1-217, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-217ENST00000475772 SLC43A3Q8NBI5 491 aa12.42□□□□□ -0.42
CALD1-217ENST00000475772 PI4K2BQ8TCG2 481 aa12.42□□□□□ -0.42
CALD1-217ENST00000475772 OTUD7AQ8TE49 926 aaPredicted RBP12.42□□□□□ -0.42
CALD1-217ENST00000475772 AGBL1Q96MI9 1066 aa12.42□□□□□ -0.42
CALD1-217ENST00000475772 GLT1D1Q96MS3 346 aa12.42□□□□□ -0.42
CALD1-217ENST00000475772 FAM117AQ9C073 453 aa12.42□□□□□ -0.42
CALD1-217ENST00000475772 ZNF576Q9H609 170 aa12.42□□□□□ -0.42
CALD1-217ENST00000475772 CHD7Q9P2D1 2997 aa12.42□□□□□ -0.42
CALD1-217ENST00000475772 SYNPO2Q9UMS6 1093 aa12.42□□□□□ -0.42
CALD1-217ENST00000475772 GNEQ9Y223 722 aaKnown RBP12.42□□□□□ -0.42
CALD1-217ENST00000475772 NCOR1O75376 2440 aa12.42□□□□□ -0.42
CALD1-217ENST00000475772 PLIN4Q96Q06 1357 aa12.42□□□□□ -0.42
CALD1-217ENST00000475772 GRIN2DO15399 1336 aa12.41□□□□□ -0.42
CALD1-217ENST00000475772 TMEM232C9JQI7 657 aa12.41□□□□□ -0.42
CALD1-217ENST00000475772 APPP05067 770 aa12.41□□□□□ -0.42
CALD1-217ENST00000475772 GNAT2P19087 354 aa12.41□□□□□ -0.42
CALD1-217ENST00000475772 SNAP25P60880 206 aa12.41□□□□□ -0.42
CALD1-217ENST00000475772 TFAP4Q01664 338 aa12.41□□□□□ -0.42
CALD1-217ENST00000475772 GNASQ5JWF2 1037 aa12.41□□□□□ -0.42
CALD1-217ENST00000475772 ZNF365Q70YC5 407 aa12.41□□□□□ -0.42
CALD1-217ENST00000475772 RASGRP2Q7LDG7 609 aa12.41□□□□□ -0.42
CALD1-217ENST00000475772 PCSK9Q8NBP7 692 aaKnown RBP12.41□□□□□ -0.42
CALD1-217ENST00000475772 CHMP4CQ96CF2 233 aa12.41□□□□□ -0.42
CALD1-217ENST00000475772 VWCEQ96DN2 955 aa12.41□□□□□ -0.42
CALD1-217ENST00000475772 PBX4Q9BYU1 374 aa12.41□□□□□ -0.42
CALD1-217ENST00000475772 A1CFQ9NQ94 594 aaKnown RBP12.41□□□□□ -0.42
CALD1-217ENST00000475772 PRDM6Q9NQX0 595 aa12.41□□□□□ -0.42
CALD1-217ENST00000475772 PDGFCQ9NRA1 345 aa12.41□□□□□ -0.42
CALD1-217ENST00000475772 IL17RBQ9NRM6 502 aa12.41□□□□□ -0.42
CALD1-217ENST00000475772 HOMER2Q9NSB8 354 aa12.41□□□□□ -0.42
CALD1-217ENST00000475772 FBXO40Q9UH90 709 aa12.41□□□□□ -0.42
CALD1-217ENST00000475772 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.41□□□□□ -0.42
CALD1-217ENST00000475772 UMODL1Q5DID0 1318 aa12.4□□□□□ -0.42
CALD1-217ENST00000475772 A0A0U1RQG5 324 aaPredicted RBP12.4□□□□□ -0.42
CALD1-217ENST00000475772 TSPY3P0CV98 308 aa12.4□□□□□ -0.42
CALD1-217ENST00000475772 TSPY8P0CW00 308 aa12.4□□□□□ -0.42
CALD1-217ENST00000475772 MCCP23508 829 aa12.4□□□□□ -0.42
CALD1-217ENST00000475772 PPARAQ07869 468 aa12.4□□□□□ -0.42
CALD1-217ENST00000475772 MUM1L1Q5H9M0 696 aa12.4□□□□□ -0.42
CALD1-217ENST00000475772 ZMYM1Q5SVZ6 1142 aa12.4□□□□□ -0.42
CALD1-217ENST00000475772 TAPT1Q6NXT6 567 aa12.4□□□□□ -0.42
CALD1-217ENST00000475772 STAG1Q8WVM7 1258 aa12.4□□□□□ -0.42
CALD1-217ENST00000475772 TIFAQ96CG3 184 aa12.4□□□□□ -0.42
CALD1-217ENST00000475772 THAP11Q96EK4 314 aa12.4□□□□□ -0.42
CALD1-217ENST00000475772 PURBQ96QR8 312 aaKnown RBP12.4□□□□□ -0.42
CALD1-217ENST00000475772 PPP1R12CQ9BZL4 782 aa12.4□□□□□ -0.42
CALD1-217ENST00000475772 ACAD9Q9H845 621 aa12.4□□□□□ -0.42
CALD1-217ENST00000475772 PCDHB15Q9Y5E8 787 aa12.4□□□□□ -0.42
CALD1-217ENST00000475772 REV3LO60673 3130 aa12.4□□□□□ -0.42
CALD1-217ENST00000475772 MROH7Q68CQ1 1323 aa12.39□□□□□ -0.43
CALD1-217ENST00000475772 TLL1O43897 1013 aa12.39□□□□□ -0.43
CALD1-217ENST00000475772 NMT2O60551 498 aa12.39□□□□□ -0.43
CALD1-217ENST00000475772 PLA2G6O60733 806 aa12.39□□□□□ -0.43
CALD1-217ENST00000475772 FDX1P10109 184 aa12.39□□□□□ -0.43
CALD1-217ENST00000475772 SMPD1P17405 629 aa12.39□□□□□ -0.43
CALD1-217ENST00000475772 CYP2C18P33260 490 aa12.39□□□□□ -0.43
CALD1-217ENST00000475772 NOVP48745 357 aa12.39□□□□□ -0.43
CALD1-217ENST00000475772 GUCA2AQ02747 115 aa12.39□□□□□ -0.43
CALD1-217ENST00000475772 PPIGQ13427 754 aaKnown RBP eCLIP12.39□□□□□ -0.43
CALD1-217ENST00000475772 CXCL17Q6UXB2 119 aa12.39□□□□□ -0.43
CALD1-217ENST00000475772 VTI1AQ96AJ9 217 aa12.39□□□□□ -0.43
CALD1-217ENST00000475772 TRERF1Q96PN7 1200 aa12.39□□□□□ -0.43
CALD1-217ENST00000475772 ZNF287Q9HBT7 754 aa12.39□□□□□ -0.43
CALD1-217ENST00000475772 RNF146Q9NTX7 359 aa12.39□□□□□ -0.43
CALD1-217ENST00000475772 CXXC1Q9P0U4 656 aaPredicted RBP12.39□□□□□ -0.43
CALD1-217ENST00000475772 CTDP1Q9Y5B0 961 aaPredicted RBP12.39□□□□□ -0.43
CALD1-217ENST00000475772 LRRC37A2A6NM11 1700 aa12.39□□□□□ -0.43
CALD1-217ENST00000475772 SLC1A4P43007 532 aa12.38□□□□□ -0.43
CALD1-217ENST00000475772 STAT2P52630 851 aa12.38□□□□□ -0.43
CALD1-217ENST00000475772 TNFAIP2Q03169 654 aa12.38□□□□□ -0.43
CALD1-217ENST00000475772 CTDSPL2Q05D32 466 aa12.38□□□□□ -0.43
CALD1-217ENST00000475772 PDE4BQ07343 736 aa12.38□□□□□ -0.43
CALD1-217ENST00000475772 ADGRE1Q14246 886 aa12.38□□□□□ -0.43
CALD1-217ENST00000475772 RCSD1Q6JBY9 416 aa12.38□□□□□ -0.43
CALD1-217ENST00000475772 CCDC129Q6ZRS4 1044 aa12.38□□□□□ -0.43
CALD1-217ENST00000475772 KCTD1Q719H9 257 aa12.38□□□□□ -0.43
CALD1-217ENST00000475772 FAM160B2Q86V87 743 aa12.38□□□□□ -0.43
CALD1-217ENST00000475772 TMEM199Q8N511 208 aa12.38□□□□□ -0.43
CALD1-217ENST00000475772 CHURC1Q8WUH1 139 aa12.38□□□□□ -0.43
CALD1-217ENST00000475772 GMCL1Q96IK5 515 aa12.38□□□□□ -0.43
CALD1-217ENST00000475772 SPC25Q9HBM1 224 aa12.38□□□□□ -0.43
CALD1-217ENST00000475772 PRR12Q9ULL5 1215 aa12.38□□□□□ -0.43
CALD1-217ENST00000475772 SCN5AQ14524 2016 aa12.38□□□□□ -0.43
CALD1-217ENST00000475772 TET1Q8NFU7 2136 aa12.38□□□□□ -0.43
CALD1-217ENST00000475772 TRIP12Q14669 1992 aaPredicted RBP12.38□□□□□ -0.43
CALD1-217ENST00000475772 TTC41PQ6P2S7 1318 aa12.37□□□□□ -0.43
CALD1-217ENST00000475772 SALL3Q9BXA9 1300 aa12.37□□□□□ -0.43
CALD1-217ENST00000475772 ASB14A6NK59 587 aa12.37□□□□□ -0.43
CALD1-217ENST00000475772 DYNC1LI2O43237 492 aaPredicted RBP12.37□□□□□ -0.43
CALD1-217ENST00000475772 ALAS1P13196 640 aa12.37□□□□□ -0.43
CALD1-217ENST00000475772 NDUFV2P19404 249 aa12.37□□□□□ -0.43
CALD1-217ENST00000475772 ITGA7Q13683 1181 aa12.37□□□□□ -0.43
CALD1-217ENST00000475772 TKFCQ3LXA3 575 aa12.37□□□□□ -0.43
CALD1-217ENST00000475772 TTBK2Q6IQ55 1244 aa12.37□□□□□ -0.43
CALD1-217ENST00000475772 EEPD1Q7L9B9 569 aa12.37□□□□□ -0.43
CALD1-217ENST00000475772 MORC4Q8TE76 937 aa12.37□□□□□ -0.43
CALD1-217ENST00000475772 HERVK_113Q902F9 699 aa12.37□□□□□ -0.43
CALD1-217ENST00000475772 NAPBQ9H115 298 aa12.37□□□□□ -0.43
CALD1-217ENST00000475772 PRDM12Q9H4Q4 367 aa12.37□□□□□ -0.43
CALD1-217ENST00000475772 IL23AQ9NPF7 189 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms