RNA–Protein interactions for RNA: ENST00000475591.5

UBXN11-214, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,542 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-214ENST00000475591 SCN9AQ15858 1988 aa15.76■□□□□ 0.11
UBXN11-214ENST00000475591 MYO3BQ8WXR4 1341 aa15.76■□□□□ 0.11
UBXN11-214ENST00000475591 GDF11O95390 407 aa15.76■□□□□ 0.11
UBXN11-214ENST00000475591 CLCN6P51797 869 aa15.76■□□□□ 0.11
UBXN11-214ENST00000475591 TMEM266Q2M3C6 531 aa15.76■□□□□ 0.11
UBXN11-214ENST00000475591 DACT2Q5SW24 774 aa15.76■□□□□ 0.11
UBXN11-214ENST00000475591 GPATCH4Q5T3I0 446 aaKnown RBP15.76■□□□□ 0.11
UBXN11-214ENST00000475591 CYP26C1Q6V0L0 522 aa15.76■□□□□ 0.11
UBXN11-214ENST00000475591 PODNQ7Z5L7 613 aa15.76■□□□□ 0.11
UBXN11-214ENST00000475591 PSTPIP2Q9H939 334 aa15.76■□□□□ 0.11
UBXN11-214ENST00000475591 OGFRQ9NZT2 677 aa15.76■□□□□ 0.11
UBXN11-214ENST00000475591 TFR2Q9UP52 801 aa15.76■□□□□ 0.11
UBXN11-214ENST00000475591 GREB1LQ9C091 1923 aaPredicted RBP15.76■□□□□ 0.11
UBXN11-214ENST00000475591 RASSF10A6NK89 507 aa15.75■□□□□ 0.11
UBXN11-214ENST00000475591 AMPD3Q01432 767 aa15.75■□□□□ 0.11
UBXN11-214ENST00000475591 ORC2Q13416 577 aaPredicted RBP15.75■□□□□ 0.11
UBXN11-214ENST00000475591 TRIM14Q14142 442 aa15.75■□□□□ 0.11
UBXN11-214ENST00000475591 SEPT2Q15019 361 aa15.75■□□□□ 0.11
UBXN11-214ENST00000475591 QRICH1Q2TAL8 776 aa15.75■□□□□ 0.11
UBXN11-214ENST00000475591 CCDC47Q96A33 483 aaKnown RBP15.75■□□□□ 0.11
UBXN11-214ENST00000475591 ZSWIM4Q9H7M6 989 aa15.75■□□□□ 0.11
UBXN11-214ENST00000475591 ERCC3P19447 782 aa15.75■□□□□ 0.11
UBXN11-214ENST00000475591 CERKLQ49MI3 558 aaPredicted RBP15.75■□□□□ 0.11
UBXN11-214ENST00000475591 SIAH1Q8IUQ4 282 aa15.75■□□□□ 0.11
UBXN11-214ENST00000475591 SLC35F6Q8N357 371 aa15.75■□□□□ 0.11
UBXN11-214ENST00000475591 MTMR8Q96EF0 704 aa15.75■□□□□ 0.11
UBXN11-214ENST00000475591 EHD4Q9H223 541 aa15.75■□□□□ 0.11
UBXN11-214ENST00000475591 AGPAT5Q9NUQ2 364 aa15.75■□□□□ 0.11
UBXN11-214ENST00000475591 TRIM10Q9UDY6 481 aa15.75■□□□□ 0.11
UBXN11-214ENST00000475591 REXO2Q9Y3B8 237 aaKnown RBP15.75■□□□□ 0.11
UBXN11-214ENST00000475591 PLSCR1O15162 318 aa15.74■□□□□ 0.11
UBXN11-214ENST00000475591 KIF5CO60282 957 aa15.74■□□□□ 0.11
UBXN11-214ENST00000475591 IDEP14735 1019 aa15.74■□□□□ 0.11
UBXN11-214ENST00000475591 ARHGAP25P42331 645 aa15.74■□□□□ 0.11
UBXN11-214ENST00000475591 SLC1A4P43007 532 aa15.74■□□□□ 0.11
UBXN11-214ENST00000475591 AOC3Q16853 763 aa15.74■□□□□ 0.11
UBXN11-214ENST00000475591 PPP1R18Q6NYC8 613 aa15.74■□□□□ 0.11
UBXN11-214ENST00000475591 WDR59Q6PJI9 974 aa15.74■□□□□ 0.11
UBXN11-214ENST00000475591 RAD54LQ92698 747 aa15.74■□□□□ 0.11
UBXN11-214ENST00000475591 EFCAB8A8MWE9 144 aa15.74■□□□□ 0.11
UBXN11-214ENST00000475591 MTIF2P46199 727 aaKnown RBP15.74■□□□□ 0.11
UBXN11-214ENST00000475591 JAG1P78504 1218 aa15.74■□□□□ 0.11
UBXN11-214ENST00000475591 LRRC41Q15345 812 aa15.74■□□□□ 0.11
UBXN11-214ENST00000475591 MIIPQ5JXC2 388 aa15.74■□□□□ 0.11
UBXN11-214ENST00000475591 TEX35Q5T0J7 233 aa15.74■□□□□ 0.11
UBXN11-214ENST00000475591 SLFN13Q68D06 897 aa15.74■□□□□ 0.11
UBXN11-214ENST00000475591 CNNM4Q6P4Q7 775 aa15.74■□□□□ 0.11
UBXN11-214ENST00000475591 LUC7L2Q9Y383 392 aaKnown RBP15.74■□□□□ 0.11
UBXN11-214ENST00000475591 MYH7BA7E2Y1 1941 aa15.74■□□□□ 0.11
UBXN11-214ENST00000475591 A0A1W2PQC6 194 aa15.73■□□□□ 0.11
UBXN11-214ENST00000475591 BICDL2A1A5D9 508 aa15.73■□□□□ 0.11
UBXN11-214ENST00000475591 MRPL12P52815 198 aaKnown RBP15.73■□□□□ 0.11
UBXN11-214ENST00000475591 STRIP1Q5VSL9 837 aa15.73■□□□□ 0.11
UBXN11-214ENST00000475591 KRT79Q5XKE5 535 aa15.73■□□□□ 0.11
UBXN11-214ENST00000475591 PPP4R3AQ6IN85 833 aa15.73■□□□□ 0.11
UBXN11-214ENST00000475591 DDX12PQ92771 950 aa15.73■□□□□ 0.11
UBXN11-214ENST00000475591 P2RX7Q99572 595 aaKnown RBP15.73■□□□□ 0.11
UBXN11-214ENST00000475591 TDRD3Q9H7E2 651 aaKnown RBP15.73■□□□□ 0.11
UBXN11-214ENST00000475591 STK17AQ9UEE5 414 aa15.73■□□□□ 0.11
UBXN11-214ENST00000475591 ATF5Q9Y2D1 282 aaPredicted RBP15.73■□□□□ 0.11
UBXN11-214ENST00000475591 PCDHA1Q9Y5I3 950 aa15.73■□□□□ 0.11
UBXN11-214ENST00000475591 SLX4Q8IY92 1834 aa15.73■□□□□ 0.11
UBXN11-214ENST00000475591 DNM2P50570 870 aa15.73■□□□□ 0.11
UBXN11-214ENST00000475591 TBC1D8BQ0IIM8 1120 aa15.73■□□□□ 0.11
UBXN11-214ENST00000475591 CDC37Q16543 378 aaPredicted RBP15.73■□□□□ 0.11
UBXN11-214ENST00000475591 TMEM119Q4V9L6 283 aa15.73■□□□□ 0.11
UBXN11-214ENST00000475591 UNC13DQ70J99 1090 aa15.73■□□□□ 0.11
UBXN11-214ENST00000475591 OR8K1Q8NGG5 319 aa15.73■□□□□ 0.11
UBXN11-214ENST00000475591 NOC3LQ8WTT2 800 aaKnown RBP15.73■□□□□ 0.11
UBXN11-214ENST00000475591 CCDC17Q96LX7 622 aa15.73■□□□□ 0.11
UBXN11-214ENST00000475591 NOC4LQ9BVI4 516 aaKnown RBP15.73■□□□□ 0.11
UBXN11-214ENST00000475591 CAPN11Q9UMQ6 739 aa15.73■□□□□ 0.11
UBXN11-214ENST00000475591 C10orf71Q711Q0 1435 aa15.73■□□□□ 0.11
UBXN11-214ENST00000475591 MARCH6O60337 910 aa15.72■□□□□ 0.11
UBXN11-214ENST00000475591 NDUFA10O95299 355 aa15.72■□□□□ 0.11
UBXN11-214ENST00000475591 PDIA5Q14554 519 aa15.72■□□□□ 0.11
UBXN11-214ENST00000475591 GPIHBP1Q8IV16 184 aa15.72■□□□□ 0.11
UBXN11-214ENST00000475591 DNAJC7Q99615 494 aa15.72■□□□□ 0.11
UBXN11-214ENST00000475591 TTYH3Q9C0H2 523 aa15.72■□□□□ 0.11
UBXN11-214ENST00000475591 PI4KBQ9UBF8 816 aa15.72■□□□□ 0.11
UBXN11-214ENST00000475591 EPN1Q9Y6I3 576 aaPredicted RBP15.72■□□□□ 0.11
UBXN11-214ENST00000475591 SEC31AO94979 1220 aaKnown RBP15.72■□□□□ 0.11
UBXN11-214ENST00000475591 TRIM21P19474 475 aaKnown RBP15.72■□□□□ 0.11
UBXN11-214ENST00000475591 ICA1Q05084 483 aa15.72■□□□□ 0.11
UBXN11-214ENST00000475591 SEMA3FQ13275 785 aa15.72■□□□□ 0.11
UBXN11-214ENST00000475591 CENPPQ6IPU0 288 aa15.72■□□□□ 0.11
UBXN11-214ENST00000475591 PCMTD1Q96MG8 357 aaPredicted RBP15.72■□□□□ 0.11
UBXN11-214ENST00000475591 RAB34Q9BZG1 259 aa15.72■□□□□ 0.11
UBXN11-214ENST00000475591 PUF60Q9UHX1 559 aaKnown RBP15.72■□□□□ 0.11
UBXN11-214ENST00000475591 H0YIN7 160 aa15.71■□□□□ 0.11
UBXN11-214ENST00000475591 SSBP05455 408 aaKnown RBP eCLIP15.71■□□□□ 0.11
UBXN11-214ENST00000475591 ZSCAN20P17040 1043 aaPredicted RBP15.71■□□□□ 0.11
UBXN11-214ENST00000475591 STAT3P40763 770 aa15.71■□□□□ 0.11
UBXN11-214ENST00000475591 RRP1BQ14684 758 aaKnown RBP15.71■□□□□ 0.11
UBXN11-214ENST00000475591 SMAP1Q8IYB5 467 aaPredicted RBP15.71■□□□□ 0.11
UBXN11-214ENST00000475591 IDI2Q9BXS1 227 aa15.71■□□□□ 0.11
UBXN11-214ENST00000475591 FGFBP2Q9BYJ0 223 aa15.71■□□□□ 0.11
UBXN11-214ENST00000475591 TRIM34Q9BYJ4 488 aa15.71■□□□□ 0.11
UBXN11-214ENST00000475591 PCDHA12Q9UN75 941 aa15.71■□□□□ 0.11
UBXN11-214ENST00000475591 E9PMD0 336 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms