RNA–Protein interactions for RNA: ENST00000475488.3

SSPO-205, Transcript of SCO-spondin, humanhuman

TSL 1 (best)

Gene SSPO, Length 7,481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPO-205ENST00000475488 ARHGEF1Q92888 912 aaKnown RBP15.49■□□□□ 0.07
SSPO-205ENST00000475488 MCF2LO15068 1137 aa15.49■□□□□ 0.07
SSPO-205ENST00000475488 EYA1Q99502 592 aa15.49■□□□□ 0.07
SSPO-205ENST00000475488 HOMER3Q9NSC5 361 aa15.49■□□□□ 0.07
SSPO-205ENST00000475488 HNRNPDLO14979 420 aaKnown RBP15.49■□□□□ 0.07
SSPO-205ENST00000475488 USP14P54578 494 aa15.49■□□□□ 0.07
SSPO-205ENST00000475488 YWHAHQ04917 246 aaPredicted RBP15.49■□□□□ 0.07
SSPO-205ENST00000475488 SYNDIG1LA6NDD5 238 aa15.49■□□□□ 0.07
SSPO-205ENST00000475488 IFNA8P32881 189 aa15.49■□□□□ 0.07
SSPO-205ENST00000475488 RECQLP46063 649 aaPredicted RBP15.49■□□□□ 0.07
SSPO-205ENST00000475488 MFAP3P55082 362 aa15.49■□□□□ 0.07
SSPO-205ENST00000475488 CMTR1Q8N1G2 835 aaKnown RBP15.49■□□□□ 0.07
SSPO-205ENST00000475488 KLHDC4Q8TBB5 520 aa15.49■□□□□ 0.07
SSPO-205ENST00000475488 KMT5AQ9NQR1 393 aa15.49■□□□□ 0.07
SSPO-205ENST00000475488 TRIM35Q9UPQ4 493 aa15.49■□□□□ 0.07
SSPO-205ENST00000475488 NEMP1O14524 444 aa15.49■□□□□ 0.07
SSPO-205ENST00000475488 LMNB2Q03252 620 aa15.49■□□□□ 0.07
SSPO-205ENST00000475488 TBC1D10BQ4KMP7 808 aaPredicted RBP15.49■□□□□ 0.07
SSPO-205ENST00000475488 CEP19Q96LK0 163 aa15.49■□□□□ 0.07
SSPO-205ENST00000475488 KDM2BQ8NHM5 1336 aa15.49■□□□□ 0.07
SSPO-205ENST00000475488 TMEM232C9JQI7 657 aa15.48■□□□□ 0.07
SSPO-205ENST00000475488 H3BRJ5 948 aa15.48■□□□□ 0.07
SSPO-205ENST00000475488 RCN2Q14257 317 aa15.48■□□□□ 0.07
SSPO-205ENST00000475488 TRIM59Q8IWR1 403 aa15.48■□□□□ 0.07
SSPO-205ENST00000475488 RMDN2Q96LZ7 410 aa15.48■□□□□ 0.07
SSPO-205ENST00000475488 RUNDC3BQ96NL0 473 aa15.48■□□□□ 0.07
SSPO-205ENST00000475488 DRC3Q9H069 523 aa15.48■□□□□ 0.07
SSPO-205ENST00000475488 BTDP43251 543 aa15.48■□□□□ 0.07
SSPO-205ENST00000475488 RPS8P62241 208 aaKnown RBP15.48■□□□□ 0.07
SSPO-205ENST00000475488 TRIM58Q8NG06 486 aa15.48■□□□□ 0.07
SSPO-205ENST00000475488 DEPDC1BQ8WUY9 529 aa15.48■□□□□ 0.07
SSPO-205ENST00000475488 RPGRIP1Q96KN7 1286 aa15.48■□□□□ 0.07
SSPO-205ENST00000475488 FAM227BQ96M60 508 aa15.48■□□□□ 0.07
SSPO-205ENST00000475488 ARL4AP40617 200 aa15.48■□□□□ 0.07
SSPO-205ENST00000475488 KPNA2P52292 529 aaKnown RBP15.48■□□□□ 0.07
SSPO-205ENST00000475488 PTK2BQ14289 1009 aa15.48■□□□□ 0.07
SSPO-205ENST00000475488 KLC3Q6P597 504 aa15.48■□□□□ 0.07
SSPO-205ENST00000475488 DSTYKQ6XUX3 929 aa15.48■□□□□ 0.07
SSPO-205ENST00000475488 SIX6OS1Q8N1H7 587 aa15.48■□□□□ 0.07
SSPO-205ENST00000475488 THEM5Q8N1Q8 247 aa15.48■□□□□ 0.07
SSPO-205ENST00000475488 TAF11Q15544 211 aa15.48■□□□□ 0.07
SSPO-205ENST00000475488 POLR2FP61218 127 aaKnown RBP15.48■□□□□ 0.07
SSPO-205ENST00000475488 ARHGEF18Q6ZSZ5 1173 aa15.48■□□□□ 0.07
SSPO-205ENST00000475488 TRMT44Q8IYL2 757 aaKnown RBP15.48■□□□□ 0.07
SSPO-205ENST00000475488 NUDCD1Q96RS6 583 aa15.48■□□□□ 0.07
SSPO-205ENST00000475488 COG4Q9H9E3 785 aa15.48■□□□□ 0.07
SSPO-205ENST00000475488 NFE2L3Q9Y4A8 694 aa15.48■□□□□ 0.07
SSPO-205ENST00000475488 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.48■□□□□ 0.07
SSPO-205ENST00000475488 U2AF2P26368 475 aaKnown RBP eCLIP15.47■□□□□ 0.07
SSPO-205ENST00000475488 IREB2P48200 963 aaKnown RBP15.47■□□□□ 0.07
SSPO-205ENST00000475488 SAR1BQ9Y6B6 198 aa15.47■□□□□ 0.07
SSPO-205ENST00000475488 BPIFB4P59827 614 aa15.47■□□□□ 0.07
SSPO-205ENST00000475488 GLE1Q53GS7 698 aaKnown RBP15.47■□□□□ 0.07
SSPO-205ENST00000475488 TSC1Q92574 1164 aa15.47■□□□□ 0.07
SSPO-205ENST00000475488 TEX12Q9BXU0 123 aa15.47■□□□□ 0.07
SSPO-205ENST00000475488 DPH5Q9H2P9 285 aa15.47■□□□□ 0.07
SSPO-205ENST00000475488 TLK1Q9UKI8 766 aa15.47■□□□□ 0.07
SSPO-205ENST00000475488 HPCAL4Q9UM19 191 aa15.47■□□□□ 0.07
SSPO-205ENST00000475488 PASKQ96RG2 1323 aa15.47■□□□□ 0.07
SSPO-205ENST00000475488 PLEKHM2Q8IWE5 1019 aa15.47■□□□□ 0.07
SSPO-205ENST00000475488 SLC7A3Q8WY07 619 aa15.47■□□□□ 0.07
SSPO-205ENST00000475488 CFAP36Q96G28 342 aa15.47■□□□□ 0.07
SSPO-205ENST00000475488 LARSQ9P2J5 1176 aaKnown RBP15.47■□□□□ 0.07
SSPO-205ENST00000475488 PCDHB15Q9Y5E8 787 aa15.47■□□□□ 0.07
SSPO-205ENST00000475488 MARK3P27448 753 aa15.47■□□□□ 0.07
SSPO-205ENST00000475488 TFAMQ00059 246 aaKnown RBP15.47■□□□□ 0.07
SSPO-205ENST00000475488 ODR4Q5SWX8 454 aa15.47■□□□□ 0.07
SSPO-205ENST00000475488 RWDD4Q6NW29 188 aaKnown RBP15.47■□□□□ 0.07
SSPO-205ENST00000475488 TMTC3Q6ZXV5 915 aa15.47■□□□□ 0.07
SSPO-205ENST00000475488 ZNF654Q8IZM8 581 aa15.47■□□□□ 0.07
SSPO-205ENST00000475488 SPICE1Q8N0Z3 855 aa15.47■□□□□ 0.07
SSPO-205ENST00000475488 FAF1Q9UNN5 650 aaPredicted RBP15.47■□□□□ 0.07
SSPO-205ENST00000475488 TTI1O43156 1089 aa15.47■□□□□ 0.07
SSPO-205ENST00000475488 NEK8Q86SG6 692 aa15.47■□□□□ 0.07
SSPO-205ENST00000475488 DCTPP1Q9H773 170 aa15.47■□□□□ 0.07
SSPO-205ENST00000475488 PPP1R9AQ9ULJ8 1098 aa15.47■□□□□ 0.07
SSPO-205ENST00000475488 TRIM37O94972 964 aa15.47■□□□□ 0.07
SSPO-205ENST00000475488 KRT24Q2M2I5 525 aa15.47■□□□□ 0.07
SSPO-205ENST00000475488 FAM186BQ8IYM0 893 aa15.47■□□□□ 0.07
SSPO-205ENST00000475488 SLFN13Q68D06 897 aa15.46■□□□□ 0.07
SSPO-205ENST00000475488 SDR42E1Q8WUS8 393 aa15.46■□□□□ 0.07
SSPO-205ENST00000475488 PRDM5Q9NQX1 630 aaPredicted RBP15.46■□□□□ 0.07
SSPO-205ENST00000475488 A2MP01023 1474 aa15.46■□□□□ 0.07
SSPO-205ENST00000475488 USP17L12C9JPN9 530 aa15.46■□□□□ 0.07
SSPO-205ENST00000475488 USP17L21D6R901 530 aa15.46■□□□□ 0.07
SSPO-205ENST00000475488 ARL13BQ3SXY8 428 aa15.46■□□□□ 0.07
SSPO-205ENST00000475488 SLC10A4Q96EP9 437 aa15.46■□□□□ 0.07
SSPO-205ENST00000475488 OR52Z1P0C646 297 aa15.46■□□□□ 0.07
SSPO-205ENST00000475488 DARS2Q6PI48 645 aaKnown RBP15.46■□□□□ 0.07
SSPO-205ENST00000475488 ARHGEF10O15013 1369 aa15.46■□□□□ 0.07
SSPO-205ENST00000475488 DRP2Q13474 957 aa15.46■□□□□ 0.07
SSPO-205ENST00000475488 ART3Q13508 389 aa15.46■□□□□ 0.07
SSPO-205ENST00000475488 URGCPQ8TCY9 931 aa15.46■□□□□ 0.07
SSPO-205ENST00000475488 KLRF2D3W0D1 207 aa15.46■□□□□ 0.06
SSPO-205ENST00000475488 NSUN2Q08J23 767 aaKnown RBP eCLIP15.46■□□□□ 0.06
SSPO-205ENST00000475488 WHAMMP3Q1A5X7 153 aa15.46■□□□□ 0.06
SSPO-205ENST00000475488 POLR3CQ9BUI4 534 aaPredicted RBP15.46■□□□□ 0.06
SSPO-205ENST00000475488 EEF1B2P24534 225 aaKnown RBP15.46■□□□□ 0.06
SSPO-205ENST00000475488 MESDQ14696 234 aa15.45■□□□□ 0.06
SSPO-205ENST00000475488 KRT40Q6A162 431 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms