RNA–Protein interactions for RNA: ENST00000475375.1

VPS36-203, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-203ENST00000475375 PITPNM1O00562 1244 aa24.09■■□□□ 1.45
VPS36-203ENST00000475375 IQCF3P0C7M6 154 aa24.09■■□□□ 1.45
VPS36-203ENST00000475375 MX1P20591 662 aa24.09■■□□□ 1.45
VPS36-203ENST00000475375 HERC6Q8IVU3 1022 aa24.09■■□□□ 1.45
VPS36-203ENST00000475375 CLEC4DQ8WXI8 215 aa24.09■■□□□ 1.45
VPS36-203ENST00000475375 TMEM47Q9BQJ4 181 aa24.09■■□□□ 1.45
VPS36-203ENST00000475375 TXNP10599 105 aaKnown RBP24.08■■□□□ 1.45
VPS36-203ENST00000475375 POU3F3P20264 500 aaPredicted RBP24.08■■□□□ 1.45
VPS36-203ENST00000475375 NOVP48745 357 aa24.08■■□□□ 1.45
VPS36-203ENST00000475375 TAP1Q03518 808 aa24.08■■□□□ 1.45
VPS36-203ENST00000475375 PNMA2Q9UL42 364 aa24.08■■□□□ 1.45
VPS36-203ENST00000475375 COG5Q9UP83 839 aa24.08■■□□□ 1.45
VPS36-203ENST00000475375 B4DLN1 442 aa24.07■■□□□ 1.44
VPS36-203ENST00000475375 KCNJ6P48051 423 aa24.07■■□□□ 1.44
VPS36-203ENST00000475375 MRPL12P52815 198 aaKnown RBP24.07■■□□□ 1.44
VPS36-203ENST00000475375 RPS6P62753 249 aaKnown RBP24.07■■□□□ 1.44
VPS36-203ENST00000475375 A6NJR5 290 aa24.06■■□□□ 1.44
VPS36-203ENST00000475375 TLL1O43897 1013 aa24.06■■□□□ 1.44
VPS36-203ENST00000475375 ARHGEF15O94989 841 aa24.06■■□□□ 1.44
VPS36-203ENST00000475375 PTPN11Q06124 597 aaPredicted RBP24.06■■□□□ 1.44
VPS36-203ENST00000475375 CCDC155Q8N6L0 562 aa24.06■■□□□ 1.44
VPS36-203ENST00000475375 DNERQ8NFT8 737 aa24.06■■□□□ 1.44
VPS36-203ENST00000475375 ZBTB47Q9UFB7 747 aaPredicted RBP24.06■■□□□ 1.44
VPS36-203ENST00000475375 SCN10AQ9Y5Y9 1956 aa24.05■■□□□ 1.44
VPS36-203ENST00000475375 PDHBP11177 359 aa24.05■■□□□ 1.44
VPS36-203ENST00000475375 PTGISQ16647 500 aa24.05■■□□□ 1.44
VPS36-203ENST00000475375 HLA-CQ95604 372 aa24.05■■□□□ 1.44
VPS36-203ENST00000475375 BAIAP3O94812 1187 aa24.04■■□□□ 1.44
VPS36-203ENST00000475375 EDNRBP24530 442 aa24.04■■□□□ 1.44
VPS36-203ENST00000475375 GRB10Q13322 594 aa24.04■■□□□ 1.44
VPS36-203ENST00000475375 USH1GQ495M9 461 aa24.04■■□□□ 1.44
VPS36-203ENST00000475375 ZBED2Q9BTP6 218 aa24.04■■□□□ 1.44
VPS36-203ENST00000475375 FGRP09769 529 aa24.03■■□□□ 1.44
VPS36-203ENST00000475375 ZNF543Q08ER8 600 aa24.03■■□□□ 1.44
VPS36-203ENST00000475375 ALX1Q15699 326 aa24.03■■□□□ 1.44
VPS36-203ENST00000475375 EVI5LQ96CN4 794 aa24.03■■□□□ 1.44
VPS36-203ENST00000475375 HELLSQ9NRZ9 838 aa24.03■■□□□ 1.44
VPS36-203ENST00000475375 TCP11L1Q9NUJ3 509 aa24.03■■□□□ 1.44
VPS36-203ENST00000475375 WDR19Q8NEZ3 1342 aa24.03■■□□□ 1.44
VPS36-203ENST00000475375 ARIH2O95376 493 aa24.02■■□□□ 1.44
VPS36-203ENST00000475375 FGAP02671 866 aa24.02■■□□□ 1.44
VPS36-203ENST00000475375 AFAP1L1Q8TED9 768 aa24.02■■□□□ 1.44
VPS36-203ENST00000475375 AFG1LQ8WV93 481 aa24.02■■□□□ 1.44
VPS36-203ENST00000475375 EPHX3Q9H6B9 360 aa24.02■■□□□ 1.44
VPS36-203ENST00000475375 PCDHB15Q9Y5E8 787 aa24.02■■□□□ 1.44
VPS36-203ENST00000475375 TANC1Q9C0D5 1861 aa24.02■■□□□ 1.44
VPS36-203ENST00000475375 HAND2P61296 217 aa24.01■■□□□ 1.43
VPS36-203ENST00000475375 CHST3Q7LGC8 479 aa24.01■■□□□ 1.43
VPS36-203ENST00000475375 SPRED2Q7Z698 418 aa24.01■■□□□ 1.43
VPS36-203ENST00000475375 CAGE1Q8TC20 777 aa24.01■■□□□ 1.43
VPS36-203ENST00000475375 WDR5P61964 334 aaKnown RBP24■■□□□ 1.43
VPS36-203ENST00000475375 GDF6Q6KF10 455 aaPredicted RBP24■■□□□ 1.43
VPS36-203ENST00000475375 SEPT14Q6ZU15 432 aa24■■□□□ 1.43
VPS36-203ENST00000475375 TMCO2Q7Z6W1 182 aaPredicted RBP24■■□□□ 1.43
VPS36-203ENST00000475375 FAM227BQ96M60 508 aa24■■□□□ 1.43
VPS36-203ENST00000475375 HCN4Q9Y3Q4 1203 aa24■■□□□ 1.43
VPS36-203ENST00000475375 LCHNA4D1U4 455 aa23.99■■□□□ 1.43
VPS36-203ENST00000475375 GH1P01241 217 aa23.99■■□□□ 1.43
VPS36-203ENST00000475375 GOLGA8HP0CJ92 632 aa23.99■■□□□ 1.43
VPS36-203ENST00000475375 SELPP16109 830 aa23.99■■□□□ 1.43
VPS36-203ENST00000475375 LY6KQ17RY6 165 aa23.99■■□□□ 1.43
VPS36-203ENST00000475375 MFSD6Q6ZSS7 791 aa23.99■■□□□ 1.43
VPS36-203ENST00000475375 LRRC8DQ7L1W4 858 aa23.99■■□□□ 1.43
VPS36-203ENST00000475375 GDPD5Q8WTR4 605 aa23.99■■□□□ 1.43
VPS36-203ENST00000475375 TTC14Q96N46 770 aa23.99■■□□□ 1.43
VPS36-203ENST00000475375 MTUS1Q9ULD2 1270 aa23.99■■□□□ 1.43
VPS36-203ENST00000475375 TET1Q8NFU7 2136 aa23.98■■□□□ 1.43
VPS36-203ENST00000475375 A0A0D9SFI3 127 aa23.98■■□□□ 1.43
VPS36-203ENST00000475375 MMP3P08254 477 aa23.98■■□□□ 1.43
VPS36-203ENST00000475375 CASTP20810 708 aaKnown RBP23.98■■□□□ 1.43
VPS36-203ENST00000475375 MCMDC2Q4G0Z9 681 aa23.98■■□□□ 1.43
VPS36-203ENST00000475375 ANKRD45Q5TZF3 282 aa23.98■■□□□ 1.43
VPS36-203ENST00000475375 LRFN3Q9BTN0 628 aa23.98■■□□□ 1.43
VPS36-203ENST00000475375 LPXNO60711 386 aa23.97■■□□□ 1.43
VPS36-203ENST00000475375 DEFB103AP81534 67 aa23.97■■□□□ 1.43
VPS36-203ENST00000475375 TMEM31Q5JXX7 168 aa23.97■■□□□ 1.43
VPS36-203ENST00000475375 GPATCH4Q5T3I0 446 aaKnown RBP23.97■■□□□ 1.43
VPS36-203ENST00000475375 CCDC62Q6P9F0 684 aa23.97■■□□□ 1.43
VPS36-203ENST00000475375 CNKSR3Q6P9H4 555 aa23.97■■□□□ 1.43
VPS36-203ENST00000475375 RGS22Q8NE09 1264 aa23.97■■□□□ 1.43
VPS36-203ENST00000475375 CRBNQ96SW2 442 aa23.97■■□□□ 1.43
VPS36-203ENST00000475375 UBA5Q9GZZ9 404 aa23.97■■□□□ 1.43
VPS36-203ENST00000475375 CPVLQ9H3G5 476 aa23.97■■□□□ 1.43
VPS36-203ENST00000475375 SALL3Q9BXA9 1300 aa23.96■■□□□ 1.43
VPS36-203ENST00000475375 SNHG28P0DPA3 235 aa23.96■■□□□ 1.43
VPS36-203ENST00000475375 HSPD1P10809 573 aaKnown RBP23.96■■□□□ 1.43
VPS36-203ENST00000475375 ARHGAP1Q07960 439 aa23.96■■□□□ 1.43
VPS36-203ENST00000475375 C7orf31Q8N865 590 aa23.96■■□□□ 1.43
VPS36-203ENST00000475375 NSUN6Q8TEA1 469 aaKnown RBP23.96■■□□□ 1.43
VPS36-203ENST00000475375 TAAR1Q96RJ0 339 aa23.96■■□□□ 1.43
VPS36-203ENST00000475375 ZKSCAN3Q9BRR0 538 aa23.96■■□□□ 1.43
VPS36-203ENST00000475375 TRIP12Q14669 1992 aaPredicted RBP23.95■■□□□ 1.42
VPS36-203ENST00000475375 PARNO95453 639 aaKnown RBP23.95■■□□□ 1.42
VPS36-203ENST00000475375 STXBP2Q15833 593 aa23.95■■□□□ 1.42
VPS36-203ENST00000475375 CDC37Q16543 378 aaPredicted RBP23.95■■□□□ 1.42
VPS36-203ENST00000475375 DGKDQ16760 1214 aa23.95■■□□□ 1.42
VPS36-203ENST00000475375 SESTD1Q86VW0 696 aa23.95■■□□□ 1.42
VPS36-203ENST00000475375 TBC1D5Q92609 795 aa23.95■■□□□ 1.42
VPS36-203ENST00000475375 DHX38Q92620 1227 aaKnown RBP23.95■■□□□ 1.42
VPS36-203ENST00000475375 KAT2BQ92831 832 aa23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms