RNA–Protein interactions for RNA: ENST00000474880.5

ARPC1B-216, Transcript of actin related protein 2/3 complex subunit 1B, humanhuman

TSL 5

Gene ARPC1B, Length 709 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1B-216ENST00000474880 PCDHA1Q9Y5I3 950 aa12.83□□□□□ -0.36
ARPC1B-216ENST00000474880 ZBTB43O43298 467 aa12.82□□□□□ -0.36
ARPC1B-216ENST00000474880 CYTH3O43739 400 aa12.82□□□□□ -0.36
ARPC1B-216ENST00000474880 PQBP1O60828 265 aaKnown RBP12.82□□□□□ -0.36
ARPC1B-216ENST00000474880 RXRAP19793 462 aa12.82□□□□□ -0.36
ARPC1B-216ENST00000474880 CASTP20810 708 aaKnown RBP12.82□□□□□ -0.36
ARPC1B-216ENST00000474880 NKX3-2P78367 333 aa12.82□□□□□ -0.36
ARPC1B-216ENST00000474880 BEX3Q00994 111 aa12.82□□□□□ -0.36
ARPC1B-216ENST00000474880 GNASQ5JWF2 1037 aa12.82□□□□□ -0.36
ARPC1B-216ENST00000474880 IQSEC1Q6DN90 963 aa12.82□□□□□ -0.36
ARPC1B-216ENST00000474880 APOA5Q6Q788 366 aa12.82□□□□□ -0.36
ARPC1B-216ENST00000474880 NOL8Q76FK4 1167 aaKnown RBP12.82□□□□□ -0.36
ARPC1B-216ENST00000474880 FANCBQ8NB91 859 aa12.82□□□□□ -0.36
ARPC1B-216ENST00000474880 PCSK9Q8NBP7 692 aaKnown RBP12.82□□□□□ -0.36
ARPC1B-216ENST00000474880 PIBF1Q8WXW3 757 aa12.82□□□□□ -0.36
ARPC1B-216ENST00000474880 USP26Q9BXU7 913 aa12.82□□□□□ -0.36
ARPC1B-216ENST00000474880 SPC25Q9HBM1 224 aa12.82□□□□□ -0.36
ARPC1B-216ENST00000474880 VTA1Q9NP79 307 aa12.82□□□□□ -0.36
ARPC1B-216ENST00000474880 RBM28Q9NW13 759 aaKnown RBP12.82□□□□□ -0.36
ARPC1B-216ENST00000474880 NAP1L2Q9ULW6 460 aaPredicted RBP12.82□□□□□ -0.36
ARPC1B-216ENST00000474880 LAMA2P24043 3122 aaKnown RBP12.82□□□□□ -0.36
ARPC1B-216ENST00000474880 KLF18A0A0U1RQI7 1052 aa12.81□□□□□ -0.36
ARPC1B-216ENST00000474880 PLEKHA8P1O95397 391 aa12.81□□□□□ -0.36
ARPC1B-216ENST00000474880 CFBP00751 764 aa12.81□□□□□ -0.36
ARPC1B-216ENST00000474880 CLTBP09497 229 aa12.81□□□□□ -0.36
ARPC1B-216ENST00000474880 RPS6KB1P23443 525 aa12.81□□□□□ -0.36
ARPC1B-216ENST00000474880 ITGB8P26012 769 aa12.81□□□□□ -0.36
ARPC1B-216ENST00000474880 RCAN1P53805 252 aa12.81□□□□□ -0.36
ARPC1B-216ENST00000474880 PDE4DQ08499 809 aa12.81□□□□□ -0.36
ARPC1B-216ENST00000474880 RTN1Q16799 776 aa12.81□□□□□ -0.36
ARPC1B-216ENST00000474880 SLC35G1Q2M3R5 365 aa12.81□□□□□ -0.36
ARPC1B-216ENST00000474880 LRIT3Q3SXY7 679 aa12.81□□□□□ -0.36
ARPC1B-216ENST00000474880 Q6ZUG5 572 aa12.81□□□□□ -0.36
ARPC1B-216ENST00000474880 ANKRD33Q7Z3H0 272 aa12.81□□□□□ -0.36
ARPC1B-216ENST00000474880 TLK2Q86UE8 772 aa12.81□□□□□ -0.36
ARPC1B-216ENST00000474880 RAB11FIP4Q86YS3 637 aa12.81□□□□□ -0.36
ARPC1B-216ENST00000474880 SAMD3Q8N6K7 520 aa12.81□□□□□ -0.36
ARPC1B-216ENST00000474880 TBC1D5Q92609 795 aa12.81□□□□□ -0.36
ARPC1B-216ENST00000474880 BADQ92934 168 aa12.81□□□□□ -0.36
ARPC1B-216ENST00000474880 ELP1O95163 1332 aa12.81□□□□□ -0.36
ARPC1B-216ENST00000474880 GOLGA8AA7E2F4 631 aa12.8□□□□□ -0.36
ARPC1B-216ENST00000474880 GOLGA8BA8MQT2 603 aa12.8□□□□□ -0.36
ARPC1B-216ENST00000474880 DYNC1LI2O43237 492 aaPredicted RBP12.8□□□□□ -0.36
ARPC1B-216ENST00000474880 PPP1R11O60927 126 aaPredicted RBP12.8□□□□□ -0.36
ARPC1B-216ENST00000474880 CPA1P15085 419 aa12.8□□□□□ -0.36
ARPC1B-216ENST00000474880 CDK7P50613 346 aa12.8□□□□□ -0.36
ARPC1B-216ENST00000474880 FAAP100Q0VG06 881 aa12.8□□□□□ -0.36
ARPC1B-216ENST00000474880 FSCN1Q16658 493 aaKnown RBP12.8□□□□□ -0.36
ARPC1B-216ENST00000474880 TMTC3Q6ZXV5 915 aa12.8□□□□□ -0.36
ARPC1B-216ENST00000474880 SYTL5Q8TDW5 730 aaPredicted RBP12.8□□□□□ -0.36
ARPC1B-216ENST00000474880 NSUN6Q8TEA1 469 aaKnown RBP12.8□□□□□ -0.36
ARPC1B-216ENST00000474880 BRF1Q92994 677 aa12.8□□□□□ -0.36
ARPC1B-216ENST00000474880 VTI1AQ96AJ9 217 aa12.8□□□□□ -0.36
ARPC1B-216ENST00000474880 GLT1D1Q96MS3 346 aa12.8□□□□□ -0.36
ARPC1B-216ENST00000474880 TOX2Q96NM4 488 aa12.8□□□□□ -0.36
ARPC1B-216ENST00000474880 AP5M1Q9H0R1 490 aa12.8□□□□□ -0.36
ARPC1B-216ENST00000474880 MAP3K20Q9NYL2 800 aaKnown RBP12.8□□□□□ -0.36
ARPC1B-216ENST00000474880 CYP46A1Q9Y6A2 500 aa12.8□□□□□ -0.36
ARPC1B-216ENST00000474880 SCN10AQ9Y5Y9 1956 aa12.8□□□□□ -0.36
ARPC1B-216ENST00000474880 CCDC196A0A1B0GTZ2 297 aa12.79□□□□□ -0.36
ARPC1B-216ENST00000474880 RBM47A0AV96 593 aaKnown RBP12.79□□□□□ -0.36
ARPC1B-216ENST00000474880 DCDC2CA8MYV0 355 aa12.79□□□□□ -0.36
ARPC1B-216ENST00000474880 GCOM1H8Y6P7 765 aaPredicted RBP12.79□□□□□ -0.36
ARPC1B-216ENST00000474880 KIAA0355O15063 1070 aa12.79□□□□□ -0.36
ARPC1B-216ENST00000474880 POLR2MP0CAP2 368 aa12.79□□□□□ -0.36
ARPC1B-216ENST00000474880 EDNRBP24530 442 aa12.79□□□□□ -0.36
ARPC1B-216ENST00000474880 METAP2P50579 478 aaKnown RBP eCLIP12.79□□□□□ -0.363e-6■□□□□ 11.2
ARPC1B-216ENST00000474880 HSD17B4P51659 736 aa12.79□□□□□ -0.36
ARPC1B-216ENST00000474880 PPP2R5BQ15173 497 aa12.79□□□□□ -0.36
ARPC1B-216ENST00000474880 DUSP28Q4G0W2 176 aa12.79□□□□□ -0.36
ARPC1B-216ENST00000474880 CXCL17Q6UXB2 119 aa12.79□□□□□ -0.36
ARPC1B-216ENST00000474880 RUFY3Q7L099 469 aa12.79□□□□□ -0.36
ARPC1B-216ENST00000474880 SRBD1Q8N5C6 995 aaKnown RBP12.79□□□□□ -0.36
ARPC1B-216ENST00000474880 RMDN3Q96TC7 470 aa12.79□□□□□ -0.36
ARPC1B-216ENST00000474880 WDR11Q9BZH6 1224 aa12.79□□□□□ -0.36
ARPC1B-216ENST00000474880 TM6SF1Q9BZW5 370 aa12.79□□□□□ -0.36
ARPC1B-216ENST00000474880 COL20A1Q9P218 1284 aa12.79□□□□□ -0.36
ARPC1B-216ENST00000474880 BRPF3Q9ULD4 1205 aa12.79□□□□□ -0.36
ARPC1B-216ENST00000474880 Q9Y3F1 56 aa12.79□□□□□ -0.36
ARPC1B-216ENST00000474880 MYO9BQ13459 2157 aa12.79□□□□□ -0.36
ARPC1B-216ENST00000474880 A0A0U1RQG5 324 aaPredicted RBP12.78□□□□□ -0.36
ARPC1B-216ENST00000474880 ARVCFO00192 962 aa12.78□□□□□ -0.36
ARPC1B-216ENST00000474880 OPLAHO14841 1288 aa12.78□□□□□ -0.36
ARPC1B-216ENST00000474880 GHRHRQ02643 423 aa12.78□□□□□ -0.36
ARPC1B-216ENST00000474880 APOBRQ0VD83 1088 aa12.78□□□□□ -0.36
ARPC1B-216ENST00000474880 SHHQ15465 462 aa12.78□□□□□ -0.36
ARPC1B-216ENST00000474880 C9orf50Q5SZB4 431 aa12.78□□□□□ -0.36
ARPC1B-216ENST00000474880 ARHGEF16Q5VV41 709 aa12.78□□□□□ -0.36
ARPC1B-216ENST00000474880 CMTR1Q8N1G2 835 aaKnown RBP12.78□□□□□ -0.36
ARPC1B-216ENST00000474880 FBXL16Q8N461 479 aa12.78□□□□□ -0.36
ARPC1B-216ENST00000474880 CCDC82Q8N4S0 544 aa12.78□□□□□ -0.36
ARPC1B-216ENST00000474880 CUL5Q93034 780 aa12.78□□□□□ -0.36
ARPC1B-216ENST00000474880 TAAR1Q96RJ0 339 aa12.78□□□□□ -0.36
ARPC1B-216ENST00000474880 IWS1Q96ST2 819 aa12.78□□□□□ -0.36
ARPC1B-216ENST00000474880 ZSWIM6Q9HCJ5 1215 aa12.78□□□□□ -0.36
ARPC1B-216ENST00000474880 TMEM39AQ9NV64 488 aa12.78□□□□□ -0.36
ARPC1B-216ENST00000474880 TRIP12Q14669 1992 aaPredicted RBP12.78□□□□□ -0.36
ARPC1B-216ENST00000474880 RAG1P15918 1043 aa12.77□□□□□ -0.37
ARPC1B-216ENST00000474880 EIF2AK2P19525 551 aaKnown RBP12.77□□□□□ -0.37
ARPC1B-216ENST00000474880 EPHB4P54760 987 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms