RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 DNAH12Q6ZR08 3092 aa8.08□□□□□ -1.12
LIMD1-204ENST00000474665 SLC15A5A6NIM6 579 aa8.08□□□□□ -1.12
LIMD1-204ENST00000474665 PRPF3O43395 683 aaKnown RBP8.08□□□□□ -1.12
LIMD1-204ENST00000474665 DHX16O60231 1041 aaKnown RBP8.08□□□□□ -1.12
LIMD1-204ENST00000474665 JAK2O60674 1132 aa8.08□□□□□ -1.12
LIMD1-204ENST00000474665 GPR37L1O60883 481 aa8.08□□□□□ -1.12
LIMD1-204ENST00000474665 PGK2P07205 417 aa8.08□□□□□ -1.12
LIMD1-204ENST00000474665 ADORA2AP29274 412 aa8.08□□□□□ -1.12
LIMD1-204ENST00000474665 CNTN2Q02246 1040 aa8.08□□□□□ -1.12
LIMD1-204ENST00000474665 GHRHRQ02643 423 aa8.08□□□□□ -1.12
LIMD1-204ENST00000474665 CCL14Q16627 93 aa8.08□□□□□ -1.12
LIMD1-204ENST00000474665 WWC2Q6AWC2 1192 aa8.08□□□□□ -1.12
LIMD1-204ENST00000474665 FBXO11Q86XK2 927 aa8.08□□□□□ -1.12
LIMD1-204ENST00000474665 NSUN7Q8NE18 718 aaKnown RBP8.08□□□□□ -1.12
LIMD1-204ENST00000474665 CHST13Q8NET6 341 aa8.08□□□□□ -1.12
LIMD1-204ENST00000474665 NPLOC4Q8TAT6 608 aa8.08□□□□□ -1.12
LIMD1-204ENST00000474665 GPKOWQ92917 476 aaPredicted RBP eCLIP8.08□□□□□ -1.12
LIMD1-204ENST00000474665 KHSRPQ92945 711 aaKnown RBP eCLIP8.08□□□□□ -1.12
LIMD1-204ENST00000474665 RRP36Q96EU6 259 aaKnown RBP8.08□□□□□ -1.12
LIMD1-204ENST00000474665 TMX3Q96JJ7 454 aa8.08□□□□□ -1.12
LIMD1-204ENST00000474665 AMNQ9BXJ7 453 aa8.08□□□□□ -1.12
LIMD1-204ENST00000474665 SLKQ9H2G2 1235 aaPredicted RBP8.08□□□□□ -1.12
LIMD1-204ENST00000474665 FLRT1Q9NZU1 646 aa8.08□□□□□ -1.12
LIMD1-204ENST00000474665 PCDHA1Q9Y5I3 950 aa8.08□□□□□ -1.12
LIMD1-204ENST00000474665 CCDC196A0A1B0GTZ2 297 aa8.07□□□□□ -1.12
LIMD1-204ENST00000474665 SOWAHBA6NEL2 793 aa8.07□□□□□ -1.12
LIMD1-204ENST00000474665 STXBP3O00186 592 aa8.07□□□□□ -1.12
LIMD1-204ENST00000474665 STRNO43815 780 aa8.07□□□□□ -1.12
LIMD1-204ENST00000474665 HMGCRP04035 888 aa8.07□□□□□ -1.12
LIMD1-204ENST00000474665 HOXC6P09630 235 aa8.07□□□□□ -1.12
LIMD1-204ENST00000474665 FCER1AP12319 257 aa8.07□□□□□ -1.12
LIMD1-204ENST00000474665 RPS6P62753 249 aaKnown RBP8.07□□□□□ -1.12
LIMD1-204ENST00000474665 NHLH1Q02575 133 aa8.07□□□□□ -1.12
LIMD1-204ENST00000474665 BAATQ14032 418 aaPredicted RBP8.07□□□□□ -1.12
LIMD1-204ENST00000474665 NPY5RQ15761 445 aa8.07□□□□□ -1.12
LIMD1-204ENST00000474665 PFKFB3Q16875 520 aaPredicted RBP8.07□□□□□ -1.12
LIMD1-204ENST00000474665 ZNF792Q3KQV3 632 aa8.07□□□□□ -1.12
LIMD1-204ENST00000474665 TKFCQ3LXA3 575 aa8.07□□□□□ -1.12
LIMD1-204ENST00000474665 WDR78Q5VTH9 848 aa8.07□□□□□ -1.12
LIMD1-204ENST00000474665 SLC30A10Q6XR72 485 aa8.07□□□□□ -1.12
LIMD1-204ENST00000474665 CCDC83Q8IWF9 413 aa8.07□□□□□ -1.12
LIMD1-204ENST00000474665 ABRAQ8N0Z2 381 aa8.07□□□□□ -1.12
LIMD1-204ENST00000474665 FAM133AQ8N9E0 248 aa8.07□□□□□ -1.12
LIMD1-204ENST00000474665 RGS22Q8NE09 1264 aa8.07□□□□□ -1.12
LIMD1-204ENST00000474665 SLC26A6Q9BXS9 759 aa8.07□□□□□ -1.12
LIMD1-204ENST00000474665 RNF26Q9BY78 433 aaPredicted RBP8.07□□□□□ -1.12
LIMD1-204ENST00000474665 ZNF576Q9H609 170 aa8.07□□□□□ -1.12
LIMD1-204ENST00000474665 ACAD9Q9H845 621 aa8.07□□□□□ -1.12
LIMD1-204ENST00000474665 GJB4Q9NTQ9 266 aa8.07□□□□□ -1.12
LIMD1-204ENST00000474665 CYP39A1Q9NYL5 469 aa8.07□□□□□ -1.12
LIMD1-204ENST00000474665 MYH7BA7E2Y1 1941 aa8.07□□□□□ -1.12
LIMD1-204ENST00000474665 ABCB11O95342 1321 aa8.06□□□□□ -1.12
LIMD1-204ENST00000474665 KIAA1217Q5T5P2 1943 aa8.06□□□□□ -1.12
LIMD1-204ENST00000474665 PTPDC1A2A3K4 754 aa8.06□□□□□ -1.12
LIMD1-204ENST00000474665 MEIS2O14770 477 aa8.06□□□□□ -1.12
LIMD1-204ENST00000474665 ST18O60284 1047 aa8.06□□□□□ -1.12
LIMD1-204ENST00000474665 XRCC5P13010 732 aaKnown RBP8.06□□□□□ -1.12
LIMD1-204ENST00000474665 SCG2P13521 617 aa8.06□□□□□ -1.12
LIMD1-204ENST00000474665 CYP2B6P20813 491 aa8.06□□□□□ -1.12
LIMD1-204ENST00000474665 HOXA13P31271 388 aaPredicted RBP8.06□□□□□ -1.12
LIMD1-204ENST00000474665 COPB2P35606 906 aa8.06□□□□□ -1.12
LIMD1-204ENST00000474665 HSD17B4P51659 736 aa8.06□□□□□ -1.12
LIMD1-204ENST00000474665 KCNQ1P51787 676 aa8.06□□□□□ -1.12
LIMD1-204ENST00000474665 ATN1P54259 1190 aaPredicted RBP8.06□□□□□ -1.12
LIMD1-204ENST00000474665 TFF2Q03403 129 aa8.06□□□□□ -1.12
LIMD1-204ENST00000474665 MAP2K5Q13163 448 aa8.06□□□□□ -1.12
LIMD1-204ENST00000474665 CUL4AQ13619 759 aa8.06□□□□□ -1.12
LIMD1-204ENST00000474665 USP17L6PQ6QN14 398 aa8.06□□□□□ -1.12
LIMD1-204ENST00000474665 NSMFQ6X4W1 530 aa8.06□□□□□ -1.12
LIMD1-204ENST00000474665 HEATR3Q7Z4Q2 680 aa8.06□□□□□ -1.12
LIMD1-204ENST00000474665 SMARCC2Q8TAQ2 1214 aa8.06□□□□□ -1.12
LIMD1-204ENST00000474665 SYTL5Q8TDW5 730 aaPredicted RBP8.06□□□□□ -1.12
LIMD1-204ENST00000474665 TRIB2Q92519 343 aa8.06□□□□□ -1.12
LIMD1-204ENST00000474665 BADQ92934 168 aa8.06□□□□□ -1.12
LIMD1-204ENST00000474665 SNX21Q969T3 373 aa8.06□□□□□ -1.12
LIMD1-204ENST00000474665 ZSCAN31Q96LW9 406 aaPredicted RBP8.06□□□□□ -1.12
LIMD1-204ENST00000474665 GAS2L1Q99501 681 aaPredicted RBP8.06□□□□□ -1.12
LIMD1-204ENST00000474665 MMP19Q99542 508 aa8.06□□□□□ -1.12
LIMD1-204ENST00000474665 NUDT12Q9BQG2 462 aa8.06□□□□□ -1.12
LIMD1-204ENST00000474665 SENP6Q9GZR1 1112 aaPredicted RBP8.06□□□□□ -1.12
LIMD1-204ENST00000474665 PRDM12Q9H4Q4 367 aa8.06□□□□□ -1.12
LIMD1-204ENST00000474665 SH2B1Q9NRF2 756 aaPredicted RBP8.06□□□□□ -1.12
LIMD1-204ENST00000474665 BARHL2Q9NY43 387 aa8.06□□□□□ -1.12
LIMD1-204ENST00000474665 PRKAG2Q9UGJ0 569 aa8.06□□□□□ -1.12
LIMD1-204ENST00000474665 FBXO40Q9UH90 709 aa8.06□□□□□ -1.12
LIMD1-204ENST00000474665 CTDP1Q9Y5B0 961 aaPredicted RBP8.06□□□□□ -1.12
LIMD1-204ENST00000474665 LRRC37A2A6NM11 1700 aa8.06□□□□□ -1.12
LIMD1-204ENST00000474665 STK36Q9NRP7 1315 aa8.05□□□□□ -1.12
LIMD1-204ENST00000474665 CPLX1O14810 134 aa8.05□□□□□ -1.12
LIMD1-204ENST00000474665 EDIL3O43854 480 aa8.05□□□□□ -1.12
LIMD1-204ENST00000474665 SNAI1O95863 264 aaPredicted RBP8.05□□□□□ -1.12
LIMD1-204ENST00000474665 DNAJB2P25686 324 aa8.05□□□□□ -1.12
LIMD1-204ENST00000474665 SSRP1Q08945 709 aaKnown RBP8.05□□□□□ -1.12
LIMD1-204ENST00000474665 ADGRE1Q14246 886 aa8.05□□□□□ -1.12
LIMD1-204ENST00000474665 CCAR1Q8IX12 1150 aaKnown RBP8.05□□□□□ -1.12
LIMD1-204ENST00000474665 ANKRD35Q8N283 1001 aa8.05□□□□□ -1.12
LIMD1-204ENST00000474665 TRPV1Q8NER1 839 aa8.05□□□□□ -1.12
LIMD1-204ENST00000474665 SOCS4Q8WXH5 440 aa8.05□□□□□ -1.12
LIMD1-204ENST00000474665 DDX11Q96FC9 970 aa8.05□□□□□ -1.12
LIMD1-204ENST00000474665 MAML3Q96JK9 1138 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms