RNA–Protein interactions for RNA: ENST00000474393.5

TMCO3-207, Transcript of transmembrane and coiled-coil domains 3, humanhuman

TSL 2 BASIC

Gene TMCO3, Length 2,843 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO3-207ENST00000474393 C16orf86Q6ZW13 317 aa16.74■□□□□ 0.27
TMCO3-207ENST00000474393 C2CD5Q86YS7 1000 aa16.74■□□□□ 0.27
TMCO3-207ENST00000474393 CERS5Q8N5B7 392 aa16.74■□□□□ 0.27
TMCO3-207ENST00000474393 ANKRD20A12PQ8NF67 263 aa16.74■□□□□ 0.27
TMCO3-207ENST00000474393 CD248Q9HCU0 757 aa16.74■□□□□ 0.27
TMCO3-207ENST00000474393 TCP11L1Q9NUJ3 509 aa16.74■□□□□ 0.27
TMCO3-207ENST00000474393 ERCC5P28715 1186 aaPredicted RBP16.74■□□□□ 0.27
TMCO3-207ENST00000474393 DNA2P51530 1060 aa16.74■□□□□ 0.27
TMCO3-207ENST00000474393 ZNF174Q15697 407 aa16.74■□□□□ 0.27
TMCO3-207ENST00000474393 CCDC91Q7Z6B0 441 aa16.74■□□□□ 0.27
TMCO3-207ENST00000474393 DMGDHQ9UI17 866 aaKnown RBP16.74■□□□□ 0.27
TMCO3-207ENST00000474393 SUGT1Q9Y2Z0 365 aa16.74■□□□□ 0.27
TMCO3-207ENST00000474393 SCG2P13521 617 aa16.73■□□□□ 0.27
TMCO3-207ENST00000474393 KLK7P49862 253 aa16.73■□□□□ 0.27
TMCO3-207ENST00000474393 EYA3Q99504 573 aa16.73■□□□□ 0.27
TMCO3-207ENST00000474393 MXD3Q9BW11 206 aa16.73■□□□□ 0.27
TMCO3-207ENST00000474393 CENPHQ9H3R5 247 aa16.73■□□□□ 0.27
TMCO3-207ENST00000474393 MTMR7Q9Y216 660 aa16.73■□□□□ 0.27
TMCO3-207ENST00000474393 TNS1Q9HBL0 1735 aaKnown RBP16.73■□□□□ 0.27
TMCO3-207ENST00000474393 HERVK_113P62684 666 aa16.73■□□□□ 0.27
TMCO3-207ENST00000474393 KIAA1328Q86T90 577 aa16.73■□□□□ 0.27
TMCO3-207ENST00000474393 SUGP1Q8IWZ8 645 aaKnown RBP16.73■□□□□ 0.27
TMCO3-207ENST00000474393 CEP131Q9UPN4 1083 aa16.73■□□□□ 0.27
TMCO3-207ENST00000474393 GDAQ9Y2T3 454 aa16.73■□□□□ 0.27
TMCO3-207ENST00000474393 COPB1P53618 953 aaKnown RBP16.72■□□□□ 0.27
TMCO3-207ENST00000474393 PICALMQ13492 652 aa16.72■□□□□ 0.27
TMCO3-207ENST00000474393 STAG2Q8N3U4 1231 aa16.72■□□□□ 0.27
TMCO3-207ENST00000474393 DDX60LQ5H9U9 1706 aaKnown RBP16.72■□□□□ 0.27
TMCO3-207ENST00000474393 CPP00450 1065 aa16.72■□□□□ 0.27
TMCO3-207ENST00000474393 GRM4Q14833 912 aa16.72■□□□□ 0.27
TMCO3-207ENST00000474393 PFKFB3Q16875 520 aaPredicted RBP16.72■□□□□ 0.27
TMCO3-207ENST00000474393 CCNI2Q6ZMN8 369 aaPredicted RBP16.72■□□□□ 0.27
TMCO3-207ENST00000474393 TMEM47Q9BQJ4 181 aa16.72■□□□□ 0.27
TMCO3-207ENST00000474393 LRRC1Q9BTT6 524 aa16.72■□□□□ 0.27
TMCO3-207ENST00000474393 SRPRBQ9Y5M8 271 aaKnown RBP16.72■□□□□ 0.27
TMCO3-207ENST00000474393 SNED1Q8TER0 1413 aa16.71■□□□□ 0.27
TMCO3-207ENST00000474393 TRIM75PA6NK02 468 aa16.71■□□□□ 0.27
TMCO3-207ENST00000474393 H0YIN7 160 aa16.71■□□□□ 0.27
TMCO3-207ENST00000474393 NDUFAB1O14561 156 aa16.71■□□□□ 0.27
TMCO3-207ENST00000474393 KRT14P02533 472 aa16.71■□□□□ 0.27
TMCO3-207ENST00000474393 PSEN1P49768 467 aa16.71■□□□□ 0.27
TMCO3-207ENST00000474393 NLRP5P59047 1200 aa16.71■□□□□ 0.27
TMCO3-207ENST00000474393 APBA1Q02410 837 aa16.71■□□□□ 0.27
TMCO3-207ENST00000474393 TSEN2Q8NCE0 465 aaKnown RBP16.71■□□□□ 0.27
TMCO3-207ENST00000474393 GRIN2DO15399 1336 aa16.71■□□□□ 0.27
TMCO3-207ENST00000474393 KCNJ18B7U540 433 aa16.71■□□□□ 0.27
TMCO3-207ENST00000474393 IDEP14735 1019 aa16.71■□□□□ 0.27
TMCO3-207ENST00000474393 ERCC3P19447 782 aa16.71■□□□□ 0.27
TMCO3-207ENST00000474393 GNAQP50148 359 aa16.71■□□□□ 0.27
TMCO3-207ENST00000474393 SCNN1DP51172 638 aa16.71■□□□□ 0.27
TMCO3-207ENST00000474393 KCNJ12Q14500 433 aa16.71■□□□□ 0.27
TMCO3-207ENST00000474393 KRT26Q7Z3Y9 468 aa16.71■□□□□ 0.27
TMCO3-207ENST00000474393 PLIN2Q99541 437 aa16.71■□□□□ 0.27
TMCO3-207ENST00000474393 SHTN1A0MZ66 631 aa16.7■□□□□ 0.26
TMCO3-207ENST00000474393 VEGFAP15692 232 aaPredicted RBP16.7■□□□□ 0.26
TMCO3-207ENST00000474393 NPY5RQ15761 445 aa16.7■□□□□ 0.26
TMCO3-207ENST00000474393 NEDD1Q8NHV4 660 aa16.7■□□□□ 0.26
TMCO3-207ENST00000474393 SPATA20Q8TB22 786 aa16.7■□□□□ 0.26
TMCO3-207ENST00000474393 DBNDD1Q9H9R9 158 aa16.7■□□□□ 0.26
TMCO3-207ENST00000474393 AGPAT5Q9NUQ2 364 aa16.7■□□□□ 0.26
TMCO3-207ENST00000474393 ZNF219Q9P2Y4 722 aaPredicted RBP16.7■□□□□ 0.26
TMCO3-207ENST00000474393 TRIML1Q8N9V2 468 aa16.7■□□□□ 0.26
TMCO3-207ENST00000474393 CTAGE1Q96RT6 745 aa16.7■□□□□ 0.26
TMCO3-207ENST00000474393 VIPAS39Q9H9C1 493 aa16.7■□□□□ 0.26
TMCO3-207ENST00000474393 MAD2L2Q9UI95 211 aa16.7■□□□□ 0.26
TMCO3-207ENST00000474393 SSBP05455 408 aaKnown RBP eCLIP16.69■□□□□ 0.26
TMCO3-207ENST00000474393 RNF187Q5TA31 235 aaPredicted RBP16.69■□□□□ 0.26
TMCO3-207ENST00000474393 MSL3Q8N5Y2 521 aaKnown RBP16.69■□□□□ 0.26
TMCO3-207ENST00000474393 ESYT3A0FGR9 886 aa16.69■□□□□ 0.26
TMCO3-207ENST00000474393 EIF3HO15372 352 aaKnown RBP eCLIP16.69■□□□□ 0.261e-8■■■■□ 20.8
TMCO3-207ENST00000474393 GUCY1A3Q02108 690 aa16.69■□□□□ 0.26
TMCO3-207ENST00000474393 SF3A3Q12874 501 aaKnown RBP eCLIP16.69■□□□□ 0.262e-8■■■□□ 17.3
TMCO3-207ENST00000474393 SLC15A2Q16348 729 aa16.69■□□□□ 0.26
TMCO3-207ENST00000474393 TTMPQ5BVD1 217 aa16.69■□□□□ 0.26
TMCO3-207ENST00000474393 NELFBQ8WX92 580 aa16.69■□□□□ 0.26
TMCO3-207ENST00000474393 TNFRSF25Q93038 417 aa16.69■□□□□ 0.26
TMCO3-207ENST00000474393 FOCADQ5VW36 1801 aa16.69■□□□□ 0.26
TMCO3-207ENST00000474393 SEC24CP53992 1094 aa16.69■□□□□ 0.26
TMCO3-207ENST00000474393 EN1Q05925 392 aaPredicted RBP16.69■□□□□ 0.26
TMCO3-207ENST00000474393 TUBB2AQ13885 445 aa16.69■□□□□ 0.26
TMCO3-207ENST00000474393 TCP11X2Q5H9J9 407 aa16.69■□□□□ 0.26
TMCO3-207ENST00000474393 STYK1Q6J9G0 422 aa16.69■□□□□ 0.26
TMCO3-207ENST00000474393 WDR59Q6PJI9 974 aa16.69■□□□□ 0.26
TMCO3-207ENST00000474393 ANKRD13CQ8N6S4 541 aa16.69■□□□□ 0.26
TMCO3-207ENST00000474393 TUBB2BQ9BVA1 445 aa16.69■□□□□ 0.26
TMCO3-207ENST00000474393 USP40Q9NVE5 1235 aa16.69■□□□□ 0.26
TMCO3-207ENST00000474393 NKRFO15226 690 aaKnown RBP eCLIP16.68■□□□□ 0.267e-7■■■■□ 19.7
TMCO3-207ENST00000474393 SHOX2O60902 331 aaPredicted RBP16.68■□□□□ 0.26
TMCO3-207ENST00000474393 CHRNA5P30532 468 aa16.68■□□□□ 0.26
TMCO3-207ENST00000474393 PMS1P54277 932 aaKnown RBP16.68■□□□□ 0.26
TMCO3-207ENST00000474393 ACTN3Q08043 901 aaPredicted RBP16.68■□□□□ 0.26
TMCO3-207ENST00000474393 PODNQ7Z5L7 613 aa16.68■□□□□ 0.26
TMCO3-207ENST00000474393 GPKOWQ92917 476 aaPredicted RBP eCLIP16.68■□□□□ 0.26
TMCO3-207ENST00000474393 ZSCAN5CA6NGD5 496 aaPredicted RBP16.68■□□□□ 0.26
TMCO3-207ENST00000474393 PLEKP08567 350 aaPredicted RBP16.68■□□□□ 0.26
TMCO3-207ENST00000474393 PPFIA1Q13136 1202 aa16.68■□□□□ 0.26
TMCO3-207ENST00000474393 ZNF579Q8NAF0 562 aaKnown RBP16.68■□□□□ 0.26
TMCO3-207ENST00000474393 TEKT1Q969V4 418 aa16.68■□□□□ 0.26
TMCO3-207ENST00000474393 CEP95Q96GE4 821 aa16.68■□□□□ 0.26
TMCO3-207ENST00000474393 PCMTD1Q96MG8 357 aaPredicted RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms