RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 PDE4BQ07343 736 aa6.86□□□□□ -1.31
SMARCE1-208ENST00000474246 PLCB4Q15147 1175 aa6.86□□□□□ -1.31
SMARCE1-208ENST00000474246 SYCP1Q15431 976 aa6.86□□□□□ -1.31
SMARCE1-208ENST00000474246 GFOD2Q3B7J2 385 aa6.86□□□□□ -1.31
SMARCE1-208ENST00000474246 ERFEQ4G0M1 354 aa6.86□□□□□ -1.31
SMARCE1-208ENST00000474246 CCDC152Q4G0S7 254 aa6.86□□□□□ -1.31
SMARCE1-208ENST00000474246 LLGL2Q6P1M3 1020 aa6.86□□□□□ -1.31
SMARCE1-208ENST00000474246 RUFY3Q7L099 469 aa6.86□□□□□ -1.31
SMARCE1-208ENST00000474246 EEPD1Q7L9B9 569 aa6.86□□□□□ -1.31
SMARCE1-208ENST00000474246 GALNT5Q7Z7M9 940 aa6.86□□□□□ -1.31
SMARCE1-208ENST00000474246 SIX5Q8N196 739 aa6.86□□□□□ -1.31
SMARCE1-208ENST00000474246 ZNF280CQ8ND82 737 aa6.86□□□□□ -1.31
SMARCE1-208ENST00000474246 ZBTB9Q96C00 473 aa6.86□□□□□ -1.31
SMARCE1-208ENST00000474246 KCTD12Q96CX2 325 aaKnown RBP6.86□□□□□ -1.31
SMARCE1-208ENST00000474246 CFAP36Q96G28 342 aa6.86□□□□□ -1.31
SMARCE1-208ENST00000474246 ACSBG1Q96GR2 724 aa6.86□□□□□ -1.31
SMARCE1-208ENST00000474246 TIGD1Q96MW7 591 aa6.86□□□□□ -1.31
SMARCE1-208ENST00000474246 LRRCC1Q9C099 1032 aa6.86□□□□□ -1.31
SMARCE1-208ENST00000474246 KCNH6Q9H252 994 aa6.86□□□□□ -1.31
SMARCE1-208ENST00000474246 KIAA1586Q9HCI6 787 aa6.86□□□□□ -1.31
SMARCE1-208ENST00000474246 CYLDQ9NQC7 956 aa6.86□□□□□ -1.31
SMARCE1-208ENST00000474246 RNF19AQ9NV58 838 aa6.86□□□□□ -1.31
SMARCE1-208ENST00000474246 PSD3Q9NYI0 1048 aa6.86□□□□□ -1.31
SMARCE1-208ENST00000474246 GTF2IRD1Q9UHL9 959 aa6.86□□□□□ -1.31
SMARCE1-208ENST00000474246 TSR3Q9UJK0 312 aaKnown RBP6.86□□□□□ -1.31
SMARCE1-208ENST00000474246 SLC27A5Q9Y2P5 690 aa6.86□□□□□ -1.31
SMARCE1-208ENST00000474246 MYO5BQ9ULV0 1848 aa6.86□□□□□ -1.31
SMARCE1-208ENST00000474246 GOLGA6L10A0A0M3HER8 536 aa6.86□□□□□ -1.31
SMARCE1-208ENST00000474246 TBKBP1A7MCY6 615 aa6.86□□□□□ -1.31
SMARCE1-208ENST00000474246 J3KRW8 73 aa6.86□□□□□ -1.31
SMARCE1-208ENST00000474246 SMC2O95347 1197 aa6.86□□□□□ -1.31
SMARCE1-208ENST00000474246 RPS2P15880 293 aaKnown RBP6.86□□□□□ -1.31
SMARCE1-208ENST00000474246 ZNF24P17028 368 aa6.86□□□□□ -1.31
SMARCE1-208ENST00000474246 CD9P21926 228 aa6.86□□□□□ -1.31
SMARCE1-208ENST00000474246 USP8P40818 1118 aa6.86□□□□□ -1.31
SMARCE1-208ENST00000474246 RAD52P43351 418 aa6.86□□□□□ -1.31
SMARCE1-208ENST00000474246 TNNT3P45378 269 aaPredicted RBP6.86□□□□□ -1.31
SMARCE1-208ENST00000474246 TMF1P82094 1093 aa6.86□□□□□ -1.31
SMARCE1-208ENST00000474246 CCDC173Q0VFZ6 552 aa6.86□□□□□ -1.31
SMARCE1-208ENST00000474246 PAK2Q13177 524 aa6.86□□□□□ -1.31
SMARCE1-208ENST00000474246 RASA2Q15283 850 aa6.86□□□□□ -1.31
SMARCE1-208ENST00000474246 MAP7D1Q3KQU3 841 aa6.86□□□□□ -1.31
SMARCE1-208ENST00000474246 TNNI3KQ59H18 835 aa6.86□□□□□ -1.31
SMARCE1-208ENST00000474246 MORN1Q5T089 497 aa6.86□□□□□ -1.31
SMARCE1-208ENST00000474246 NXNQ6DKJ4 435 aa6.86□□□□□ -1.31
SMARCE1-208ENST00000474246 USP51Q70EK9 711 aa6.86□□□□□ -1.31
SMARCE1-208ENST00000474246 MYLK4Q86YV6 388 aaPredicted RBP6.86□□□□□ -1.31
SMARCE1-208ENST00000474246 PEX5LQ8IYB4 626 aa6.86□□□□□ -1.31
SMARCE1-208ENST00000474246 CCAR2Q8N163 923 aaKnown RBP6.86□□□□□ -1.31
SMARCE1-208ENST00000474246 FAM200AQ8TCP9 573 aa6.86□□□□□ -1.31
SMARCE1-208ENST00000474246 TRPM4Q8TD43 1214 aa6.86□□□□□ -1.31
SMARCE1-208ENST00000474246 ANKRD24Q8TF21 1146 aa6.86□□□□□ -1.31
SMARCE1-208ENST00000474246 HAUS7Q99871 368 aa6.86□□□□□ -1.31
SMARCE1-208ENST00000474246 EIF2AK1Q9BQI3 630 aaKnown RBP6.86□□□□□ -1.31
SMARCE1-208ENST00000474246 TRIM55Q9BYV6 548 aa6.86□□□□□ -1.31
SMARCE1-208ENST00000474246 ATP8A2Q9NTI2 1148 aa6.86□□□□□ -1.31
SMARCE1-208ENST00000474246 TMEM260Q9NX78 707 aa6.86□□□□□ -1.31
SMARCE1-208ENST00000474246 NAIPQ13075 1403 aa6.86□□□□□ -1.31
SMARCE1-208ENST00000474246 SZT2Q5T011 3432 aa6.85□□□□□ -1.31
SMARCE1-208ENST00000474246 TTC28Q96AY4 2481 aa6.85□□□□□ -1.31
SMARCE1-208ENST00000474246 USP17L15C9J2P7 530 aa6.85□□□□□ -1.31
SMARCE1-208ENST00000474246 USP17L10C9JJH3 530 aa6.85□□□□□ -1.31
SMARCE1-208ENST00000474246 USP17L13C9JLJ4 530 aa6.85□□□□□ -1.31
SMARCE1-208ENST00000474246 USP17L12C9JPN9 530 aa6.85□□□□□ -1.31
SMARCE1-208ENST00000474246 USP17L11C9JVI0 530 aa6.85□□□□□ -1.31
SMARCE1-208ENST00000474246 USP17L21D6R901 530 aa6.85□□□□□ -1.31
SMARCE1-208ENST00000474246 USP17L18D6R9N7 530 aa6.85□□□□□ -1.31
SMARCE1-208ENST00000474246 USP17L22D6RA61 530 aa6.85□□□□□ -1.31
SMARCE1-208ENST00000474246 USP17L17D6RBQ6 530 aa6.85□□□□□ -1.31
SMARCE1-208ENST00000474246 USP17L19D6RCP7 530 aa6.85□□□□□ -1.31
SMARCE1-208ENST00000474246 USP17L20D6RJB6 530 aa6.85□□□□□ -1.31
SMARCE1-208ENST00000474246 RTCAO00442 366 aaKnown RBP6.85□□□□□ -1.31
SMARCE1-208ENST00000474246 KPNA6O60684 536 aa6.85□□□□□ -1.31
SMARCE1-208ENST00000474246 LDHBP07195 334 aaKnown RBP6.85□□□□□ -1.31
SMARCE1-208ENST00000474246 ATP6V1E1P36543 226 aa6.85□□□□□ -1.31
SMARCE1-208ENST00000474246 MXI1P50539 228 aa6.85□□□□□ -1.31
SMARCE1-208ENST00000474246 USP17L24Q0WX57 530 aa6.85□□□□□ -1.31
SMARCE1-208ENST00000474246 ARHGEF6Q15052 776 aa6.85□□□□□ -1.31
SMARCE1-208ENST00000474246 WDR44Q5JSH3 913 aa6.85□□□□□ -1.31
SMARCE1-208ENST00000474246 CCDC80Q76M96 950 aa6.85□□□□□ -1.31
SMARCE1-208ENST00000474246 LRP10Q7Z4F1 713 aa6.85□□□□□ -1.31
SMARCE1-208ENST00000474246 SLC44A2Q8IWA5 706 aaPredicted RBP6.85□□□□□ -1.31
SMARCE1-208ENST00000474246 RNF168Q8IYW5 571 aaPredicted RBP6.85□□□□□ -1.31
SMARCE1-208ENST00000474246 IL17REQ8NFR9 667 aa6.85□□□□□ -1.31
SMARCE1-208ENST00000474246 PJA1Q8NG27 643 aa6.85□□□□□ -1.31
SMARCE1-208ENST00000474246 SH3GL1Q99961 368 aa6.85□□□□□ -1.31
SMARCE1-208ENST00000474246 ELAC2Q9BQ52 826 aaKnown RBP6.85□□□□□ -1.31
SMARCE1-208ENST00000474246 CAPS2Q9BXY5 557 aa6.85□□□□□ -1.31
SMARCE1-208ENST00000474246 CDH19Q9H159 772 aa6.85□□□□□ -1.31
SMARCE1-208ENST00000474246 ARHGAP28Q9P2N2 729 aa6.85□□□□□ -1.31
SMARCE1-208ENST00000474246 TMX2Q9Y320 296 aa6.85□□□□□ -1.31
SMARCE1-208ENST00000474246 TRIM17Q9Y577 477 aa6.85□□□□□ -1.31
SMARCE1-208ENST00000474246 KIF13BQ9NQT8 1826 aa6.85□□□□□ -1.31
SMARCE1-208ENST00000474246 ZNF644Q9H582 1327 aaPredicted RBP6.85□□□□□ -1.31
SMARCE1-208ENST00000474246 AKR1B15C9JRZ8 316 aaPredicted RBP6.85□□□□□ -1.31
SMARCE1-208ENST00000474246 CFAP99D6REC4 459 aa6.85□□□□□ -1.31
SMARCE1-208ENST00000474246 NEK2P51955 445 aa6.85□□□□□ -1.31
SMARCE1-208ENST00000474246 RAC1P63000 192 aa6.85□□□□□ -1.31
SMARCE1-208ENST00000474246 NHLH1Q02575 133 aa6.85□□□□□ -1.31
SMARCE1-208ENST00000474246 FMR1Q06787 632 aaKnown RBP eCLIP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms